Re: [netcdfgroup] Calculating medians, quartiles etc of a variable in a NetCDF file.

  • To: Timothy Hume <T.Hume@xxxxxxxxxx>
  • Subject: Re: [netcdfgroup] Calculating medians, quartiles etc of a variable in a NetCDF file.
  • From: Roy Mendelssohn <Roy.Mendelssohn@xxxxxxxx>
  • Date: Sun, 11 May 2008 20:09:58 -0700
R.  And it has netcdf functions also.

-Roy M.

On May 11, 2008, at 8:07 PM, Timothy Hume wrote:

I think the reason why functions for calculating quartiles (or more generally, percentiles) are not in many software packages is because they can be computationally expensive to compute.

The only way I know how to generate percentiles is to first sort the data into numeric order, and then select the appropriate value from the list. Sorting is expensive, especially when there are a lot of data. Is there a better/faster way of computing percentiles?

Tim Hume
Centre for Australian Weather and Climate Research
Melbourne
Australia

-----Original Message-----
From: Gerry Creager [mailto:gerry.creager@xxxxxxxx]
Sent: Monday, 12 May 2008 12:41
To: Timothy Hume
Cc: Dennis Shea
Subject: Re: [netcdfgroup] Calculating medians, quartiles etc of a variable in a NetCDF file. I'd consider looking at the NCAR command language and seeing if quartile calculation is native therein. I'd be surprised if it's not, or easily
computable, but I did not find it initially.

Check http://www.ncl.ucar.edu/ and consider joining the mailing list
long enough to find out.



Timothy Hume wrote:
Hi,

I have an application where I would like to calculate quartiles of a variable in a NetCDF file (I am computing the trimean: TM = 0.25* (Q1 + 2Q2 + Q3) )

The NetCDF operators are excellent for computing arithmetic means, but don't include the capability to compute quartiles. Before I start writing my own code to compute quartiles, does anyone know of some software which already does this? Basically, I am looking for the equivalent of ncwa with a quartile operation.

Thanks,

Tim Hume
Centre for Australian Weather and Climate Research
Melbourne
Australia
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Roy Mendelssohn
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NOAA/NMFS
Environmental Research Division 
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