Which Fortran and which C compiler are you using? many of the fortrans for the
Mac will not work with certain versions of the Apple C compiler. You can
either use the C compiler and Fortrans from fink, use g95 with the Apple C
compiler, or if you want to stay with gfortran get the appropriate version from
http://R.research.att.com/tools/.
-Roy
On May 8, 2011, at 8:14 PM, Victor Muñoz wrote:
> Dear all,
>
> I want to install the MMTK. I need the netCDF but when I try to install it I
> get an error. I run the configure command like this:
>
> ./configure --prefix=/lib --disable-netcdf-4 --enable-shared
>
> and I get this error:
>
> checking if Fortran "byte" is C "signed char"... configure: error: Could not
> link conftestf.o and conftest.o
>
> I guess that's why I get this other error when running make check install:
>
> make: *** No rule to make target `check'. Stop.
>
> I'm working on a Mac OS X version 10.6.7. I'm trying to install the netCDF
> 4.1.2. At the end of the mail you will find the configure.log file.
>
> Thanks for your help.
>
> Kind Regards,
>
> Victor Muñoz
>
> ------------------------------------------------------------------------------------------------------------------------------------------
>
> This file contains any messages produced by compilers while
> running configure, to aid debugging if configure makes a mistake.
>
> It was created by netCDF configure 4.1.2, which was
> generated by GNU Autoconf 2.68. Invocation command line was
>
> $ ./configure --prefix=/lib --disable-netcdf-4 --enable-shared
>
> ## --------- ##
> ## Platform. ##
> ## --------- ##
>
> hostname = Victor-Munozs-MacBook-Pro.local
> uname -m = x86_64
> uname -r = 10.7.3
> uname -s = Darwin
> uname -v = Darwin Kernel Version 10.7.3: Sun Mar 6 13:37:56 PST 2011;
> root:xnu-1504.14.2~1/RELEASE_X86_64
>
> /usr/bin/uname -p = i386
> /bin/uname -X = unknown
>
> /bin/arch = unknown
> /usr/bin/arch -k = unknown
> /usr/convex/getsysinfo = unknown
> /usr/bin/hostinfo = Mach kernel version:
> Darwin Kernel Version 10.7.3: Sun Mar 6 13:37:56 PST 2011;
> root:xnu-1504.14.2~1/RELEASE_X86_64
> Kernel configured for up to 8 processors.
> 4 processors are physically available.
> 8 processors are logically available.
> Processor type: i486 (Intel 80486)
> Processors active: 0 1 2 3 4 5 6 7
> Primary memory available: 8.00 gigabytes
> Default processor set: 55 tasks, 326 threads, 8 processors
> Load average: 0.27, Mach factor: 7.72
> /bin/machine = unknown
> /usr/bin/oslevel = unknown
> /bin/universe = unknown
>
> PATH: /usr/bin
> PATH: /bin
> PATH: /usr/sbin
> PATH: /sbin
> PATH: /usr/local/bin
> PATH: /usr/X11/bin
>
>
> ## ----------- ##
> ## Core tests. ##
> ## ----------- ##
>
> configure:3149: netCDF 4.1.2
> configure:3189: checking build system type
> configure:3203: result: x86_64-apple-darwin10.7.3
> configure:3223: checking host system type
> configure:3236: result: x86_64-apple-darwin10.7.3
> configure:3258: checking target system type
> configure:3271: result: x86_64-apple-darwin10.7.3
> configure:3322: checking for a BSD-compatible install
> configure:3390: result: /usr/bin/install -c
> configure:3401: checking whether build environment is sane
> configure:3451: result: yes
> configure:3592: checking for a thread-safe mkdir -p
> configure:3631: result: ./install-sh -c -d
> configure:3644: checking for gawk
> configure:3674: result: no
> configure:3644: checking for mawk
> configure:3674: result: no
> configure:3644: checking for nawk
> configure:3674: result: no
> configure:3644: checking for awk
> configure:3660: found /usr/bin/awk
> configure:3671: result: awk
> configure:3682: checking whether make sets $(MAKE)
> configure:3704: result: yes
> configure:3788: checking user options
> configure:3798: checking whether CXX is set to ''
> configure:3802: result: no
> configure:3806: checking whether FC is set to ''
> configure:3810: result: no
> configure:3814: checking whether F90 is set to ''
> configure:3818: result: no
> configure:3822: checking whether a NCIO_MINBLOCKSIZE was specified
> configure:3832: result: 256
> configure:3840: checking whether udunits is to be built
> configure:3849: result: no
> configure:3852: checking if fsync support is enabled
> configure:3860: result: yes
> configure:3869: checking whether extra valgrind tests should be run
> configure:3877: result: no
> configure:3900: checking whether libcf is to be built
> configure:3909: result: no
> configure:3921: checking whether a location for the HDF4 library was specified
> configure:3929: result:
> configure:3935: checking whether reading of HDF4 SD files is to be enabled
> configure:3937: result: no
> configure:3941: checking whether to fetch some sample HDF4 files from Unidata
> ftp site to test HDF4 reading (requires wget)
> configure:3954: result: no
> configure:3958: checking whether parallel I/O for classic and 64-bit offset
> files using parallel-netcdf is to be enabled
> configure:3966: result: no
> configure:3970: checking whether a location for the parallel-netcdf library
> was specified
> configure:3979: result: no
> configure:3990: checking whether new netCDF-4 C++ API is to be built
> configure:4001: result: no
> configure:4008: checking whether extra example tests should be run
> configure:4016: result: no
> configure:4020: checking whether parallel IO tests should be run
> configure:4028: result: no
> configure:4032: checking whether a location for the HDF5 library was specified
> configure:4040: result:
> configure:4046: checking whether a location for the ZLIB library was specified
> configure:4054: result:
> configure:4060: checking whether a location for the SZLIB library was
> specified
> configure:4068: result:
> configure:4074: checking whether a default chunk size in bytes was specified
> configure:4084: result: 4194304
> configure:4093: checking whether a maximum per-variable cache size for HDF5
> was specified
> configure:4103: result: 67108864
> configure:4112: checking whether a number of chunks for the default
> per-variable cache was specified
> configure:4122: result: 10
> configure:4131: checking whether a default file cache size for HDF5 was
> specified
> configure:4141: result: 4194304
> configure:4150: checking whether a default file cache maximum number of
> elements for HDF5 was specified
> configure:4160: result: 1009
> configure:4169: checking whether a default cache preemption for HDF5 was
> specified
> configure:4179: result: 0.75
> configure:4188: checking whether netCDF-4 logging is enabled
> configure:4196: result: no
> configure:4200: checking whether cdmremote client is to be built
> configure:4210: result: no
> configure:4227: checking whether DAP client is to be built
> configure:4235: result: yes
> configure:4254: checking whether a path for curl-config was specified
> configure:4257: result: no
> configure:4265: checking whether a location for curl installation was
> specified
> configure:4274: result: no
> configure:4330: checking checking whether a location for curl-config found
> configure:4336: result: curl-config
> configure:4383: checking whether dap remote testing should be enabled
> (default on)
> configure:4394: result: yes
> configure:4419: checking whether the time-consuming dap tests should be
> enabled (default off)
> configure:4430: result: no
> configure:4443: checking whether netCDF extra tests should be run (developers
> only)
> configure:4451: result: no
> configure:4468: checking whether Fortran compiler(s) should be tested during
> configure
> configure:4476: result: yes
> configure:4480: checking whether FFIO will be used
> configure:4488: result: no
> configure:4504: checking whether to skip C++, F77, or F90 APIs if compiler is
> broken
> configure:4512: result: yes
> configure:4516: checking whether only the C library is desired
> configure:4524: result: no
> configure:4543: checking whether examples should be built
> configure:4551: result: yes
> configure:4563: checking whether F77 API is desired
> configure:4572: result: yes
> configure:4577: checking whether any Fortran API is desired
> configure:4585: result: yes
> configure:4590: checking whether F90 API is desired
> configure:4600: result: yes
> configure:4604: checking whether fortran type sizes should be checked
> configure:4612: result: yes
> configure:4618: checking whether C API is desired
> configure:4626: result: yes
> configure:4633: checking where to get netCDF C-only library for separate
> fortran libraries
> configure:4649: result:
> configure:4661: checking whether CXX API is desired
> configure:4670: result: yes
> configure:4679: checking whether v2 netCDF API should be built
> configure:4687: result: yes
> configure:4706: checking whether the ncgen/ncdump/nccopy should be built
> configure:4715: result: yes
> configure:4727: checking whether large file (> 2GB) tests should be run
> configure:4735: result: no
> configure:4752: checking whether benchmaks should be run (experimental)
> configure:4760: result: no
> configure:4772: checking whether extreme numbers should be used in tests
> configure:4787: result: yes
> configure:4799: checking where to put large temp files if large file tests
> are run
> configure:4808: result: .
> configure:4819: checking whether a win32 DLL is desired
> configure:4827: result: no
> configure:4849: checking whether separate fortran libs are desired
> configure:4857: result: yes
> configure:4892: finding C compiler
> configure:4949: checking for xlc
> configure:4979: result: no
> configure:4949: checking for cc
> configure:4965: found /usr/bin/cc
> configure:4976: result: cc
> configure:5007: checking for C compiler version
> configure:5016: cc --version >&5
> i686-apple-darwin10-gcc-4.2.1 (GCC) 4.2.1 (Apple Inc. build 5666) (dot 3)
> Copyright (C) 2007 Free Software Foundation, Inc.
> This is free software; see the source for copying conditions. There is NO
> warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
>
> configure:5027: $? = 0
> configure:5016: cc -v >&5
> Using built-in specs.
> Target: i686-apple-darwin10
> Configured with: /var/tmp/gcc/gcc-5666.3~6/src/configure --disable-checking
> --enable-werror --prefix=/usr --mandir=/share/man
> --enable-languages=c,objc,c++,obj-c++
> --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib
> --build=i686-apple-darwin10 --program-prefix=i686-apple-darwin10-
> --host=x86_64-apple-darwin10 --target=i686-apple-darwin10
> --with-gxx-include-dir=/include/c++/4.2.1
> Thread model: posix
> gcc version 4.2.1 (Apple Inc. build 5666) (dot 3)
> configure:5027: $? = 0
> configure:5016: cc -V >&5
> gcc-4.2: argument to `-V' is missing
> configure:5027: $? = 1
> configure:5016: cc -qversion >&5
> i686-apple-darwin10-gcc-4.2.1: no input files
> configure:5027: $? = 1
> configure:5047: checking whether the C compiler works
> configure:5069: cc conftest.c >&5
> configure:5073: $? = 0
> configure:5121: result: yes
> configure:5124: checking for C compiler default output file name
> configure:5126: result: a.out
> configure:5132: checking for suffix of executables
> configure:5139: cc -o conftest conftest.c >&5
> configure:5143: $? = 0
> configure:5165: result:
> configure:5187: checking whether we are cross compiling
> configure:5195: cc -o conftest conftest.c >&5
> configure:5199: $? = 0
> configure:5206: ./conftest
> configure:5210: $? = 0
> configure:5225: result: no
> configure:5230: checking for suffix of object files
> configure:5252: cc -c conftest.c >&5
> configure:5256: $? = 0
> configure:5277: result: o
> configure:5281: checking whether we are using the GNU C compiler
> configure:5300: cc -c conftest.c >&5
> configure:5300: $? = 0
> configure:5309: result: yes
> configure:5318: checking whether cc accepts -g
> configure:5338: cc -c -g conftest.c >&5
> configure:5338: $? = 0
> configure:5379: result: yes
> configure:5396: checking for cc option to accept ISO C89
> configure:5460: cc -c -g -O2 conftest.c >&5
> configure:5460: $? = 0
> configure:5473: result: none needed
> configure:5504: checking for style of include used by make
> configure:5532: result: GNU
> configure:5557: checking dependency style of cc
> configure:5667: result: gcc3
> configure:5686: checking whether cc understands -c and -o together
> configure:5714: cc -c conftest.c -o conftest2.o >&5
> configure:5718: $? = 0
> configure:5724: cc -c conftest.c -o conftest2.o >&5
> configure:5728: $? = 0
> configure:5783: result: yes
> configure:5809: checking for an ANSI C-conforming const
> configure:5874: cc -c -g -O2 conftest.c >&5
> configure:5874: $? = 0
> configure:5881: result: yes
> configure:5906: cc -c conftest.c >&5
> configure:5906: $? = 0
> configure:5912: checking whether a CURLOPT_KEYPASSWD is defined
> configure:5914: result: yes
> configure:5943: finding Fortran compiler (will not be used if Fortran API is
> not desired)
> configure:6223: checking for xlf90
> configure:6253: result: no
> configure:6223: checking for fort
> configure:6253: result: no
> configure:6223: checking for xlf95
> configure:6253: result: no
> configure:6223: checking for ifort
> configure:6253: result: no
> configure:6223: checking for ifc
> configure:6253: result: no
> configure:6223: checking for efc
> configure:6253: result: no
> configure:6223: checking for pgf95
> configure:6253: result: no
> configure:6223: checking for lf95
> configure:6253: result: no
> configure:6223: checking for g95
> configure:6253: result: no
> configure:6223: checking for gfortran
> configure:6239: found /usr/local/bin/gfortran
> configure:6250: result: gfortran
> configure:6276: checking for Fortran compiler version
> configure:6285: gfortran --version >&5
> GNU Fortran (GCC) 4.2.3
> Copyright (C) 2007 Free Software Foundation, Inc.
>
> GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
> You may redistribute copies of GNU Fortran
> under the terms of the GNU General Public License.
> For more information about these matters, see the file named COPYING
>
> configure:6296: $? = 0
> configure:6285: gfortran -v >&5
> Using built-in specs.
> Target: i686-apple-darwin8
> Configured with: /Builds/unix/gcc/gcc-4.2/configure --prefix=/usr/local
> --mandir=/share/man --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/
> --build=i686-apple-darwin8 --host=i686-apple-darwin8
> --target=i686-apple-darwin8 --enable-languages=fortran
> Thread model: posix
> gcc version 4.2.3
> configure:6296: $? = 0
> configure:6285: gfortran -V >&5
> gfortran: argument to `-V' is missing
> configure:6296: $? = 1
> configure:6285: gfortran -qversion >&5
> i686-apple-darwin8-gfortran-4.2: unrecognized option '-qversion'
> i686-apple-darwin8-gfortran-4.2: no input files
> configure:6296: $? = 1
> configure:6305: checking whether we are using the GNU Fortran compiler
> configure:6318: gfortran -c conftest.F >&5
> configure:6318: $? = 0
> configure:6327: result: yes
> configure:6333: checking whether gfortran accepts -g
> configure:6344: gfortran -c -g conftest.f >&5
> configure:6344: $? = 0
> configure:6352: result: yes
> configure:6443: checking for xlf
> configure:6473: result: no
> configure:6443: checking for fort
> configure:6473: result: no
> configure:6443: checking for xlf95
> configure:6473: result: no
> configure:6443: checking for ifort
> configure:6473: result: no
> configure:6443: checking for ifc
> configure:6473: result: no
> configure:6443: checking for efc
> configure:6473: result: no
> configure:6443: checking for pgf77
> configure:6473: result: no
> configure:6443: checking for lf95
> configure:6473: result: no
> configure:6443: checking for g95
> configure:6473: result: no
> configure:6443: checking for gfortran
> configure:6459: found /usr/local/bin/gfortran
> configure:6470: result: gfortran
> configure:6496: checking for Fortran 77 compiler version
> configure:6505: gfortran --version >&5
> GNU Fortran (GCC) 4.2.3
> Copyright (C) 2007 Free Software Foundation, Inc.
>
> GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
> You may redistribute copies of GNU Fortran
> under the terms of the GNU General Public License.
> For more information about these matters, see the file named COPYING
>
> configure:6516: $? = 0
> configure:6505: gfortran -v >&5
> Using built-in specs.
> Target: i686-apple-darwin8
> Configured with: /Builds/unix/gcc/gcc-4.2/configure --prefix=/usr/local
> --mandir=/share/man --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/
> --build=i686-apple-darwin8 --host=i686-apple-darwin8
> --target=i686-apple-darwin8 --enable-languages=fortran
> Thread model: posix
> gcc version 4.2.3
> configure:6516: $? = 0
> configure:6505: gfortran -V >&5
> gfortran: argument to `-V' is missing
> configure:6516: $? = 1
> configure:6505: gfortran -qversion >&5
> i686-apple-darwin8-gfortran-4.2: unrecognized option '-qversion'
> i686-apple-darwin8-gfortran-4.2: no input files
> configure:6516: $? = 1
> configure:6525: checking whether we are using the GNU Fortran 77 compiler
> configure:6538: gfortran -c conftest.F >&5
> configure:6538: $? = 0
> configure:6547: result: yes
> configure:6553: checking whether gfortran accepts -g
> configure:6564: gfortran -c -g conftest.f >&5
> configure:6564: $? = 0
> configure:6572: result: yes
> configure:6618: setting up Fortran 90
> configure:6637: checking for Fortran flag to compile .f90 files
> configure:6653: gfortran -c -g -O2 conftest.f90 >&5
> configure:6653: $? = 0
> configure:6662: result: none
> configure:6690: checking fortran 90 modules inclusion flag
> configure:6715: gfortran -c -g -O2 conftest.f90 >&5
> configure:6715: $? = 0
> configure:6732: gfortran -c -g -O2 -Itmpdir_0 conftest.f90 >&5
> configure:6732: $? = 0
> configure:6751: result: -I
> configure:6763: checking if Fortran compiler can handle Fortran-90
> configure:6771: gfortran -g -O2 conftest.f90
> configure:6774: $? = 0
> configure:6786: result: yes
> configure:6795: finding C++ compiler (will not be used if C++ API is not
> desired)
> configure:6863: checking for g++
> configure:6879: found /usr/bin/g++
> configure:6890: result: g++
> configure:6917: checking for C++ compiler version
> configure:6926: g++ --version >&5
> i686-apple-darwin10-g++-4.2.1 (GCC) 4.2.1 (Apple Inc. build 5666) (dot 3)
> Copyright (C) 2007 Free Software Foundation, Inc.
> This is free software; see the source for copying conditions. There is NO
> warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
>
> configure:6937: $? = 0
> configure:6926: g++ -v >&5
> Using built-in specs.
> Target: i686-apple-darwin10
> Configured with: /var/tmp/gcc/gcc-5666.3~6/src/configure --disable-checking
> --enable-werror --prefix=/usr --mandir=/share/man
> --enable-languages=c,objc,c++,obj-c++
> --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib
> --build=i686-apple-darwin10 --program-prefix=i686-apple-darwin10-
> --host=x86_64-apple-darwin10 --target=i686-apple-darwin10
> --with-gxx-include-dir=/include/c++/4.2.1
> Thread model: posix
> gcc version 4.2.1 (Apple Inc. build 5666) (dot 3)
> configure:6937: $? = 0
> configure:6926: g++ -V >&5
> g++-4.2: argument to `-V' is missing
> configure:6937: $? = 1
> configure:6926: g++ -qversion >&5
> i686-apple-darwin10-g++-4.2.1: no input files
> configure:6937: $? = 1
> configure:6941: checking whether we are using the GNU C++ compiler
> configure:6960: g++ -c conftest.cpp >&5
> configure:6960: $? = 0
> configure:6969: result: yes
> configure:6978: checking whether g++ accepts -g
> configure:6998: g++ -c -g conftest.cpp >&5
> configure:6998: $? = 0
> configure:7039: result: yes
> configure:7064: checking dependency style of g++
> configure:7174: result: gcc3
> configure:7245: setting up libtool
> configure:7294: checking how to print strings
> configure:7321: result: printf
> configure:7342: checking for a sed that does not truncate output
> configure:7406: result: /usr/bin/sed
> configure:7424: checking for grep that handles long lines and -e
> configure:7482: result: /usr/bin/grep
> configure:7487: checking for egrep
> configure:7549: result: /usr/bin/grep -E
> configure:7554: checking for fgrep
> configure:7616: result: /usr/bin/grep -F
> configure:7651: checking for ld used by cc
> configure:7718: result: /usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld
> configure:7725: checking if the linker
> (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) is GNU ld
> configure:7740: result: no
> configure:7752: checking for BSD- or MS-compatible name lister (nm)
> configure:7801: result: /usr/bin/nm
> configure:7931: checking the name lister (/usr/bin/nm) interface
> configure:7938: cc -c -g -O2 conftest.c >&5
> configure:7941: /usr/bin/nm "conftest.o"
> configure:7944: output
> 0000000000000188 D _some_variable
> configure:7951: result: BSD nm
> configure:7954: checking whether ln -s works
> configure:7958: result: yes
> configure:7966: checking the maximum length of command line arguments
> configure:8091: result: 196608
> configure:8108: checking whether the shell understands some XSI constructs
> configure:8118: result: yes
> configure:8122: checking whether the shell understands "+="
> configure:8128: result: yes
> configure:8163: checking how to convert x86_64-apple-darwin10.7.3 file names
> to x86_64-apple-darwin10.7.3 format
> configure:8203: result: func_convert_file_noop
> configure:8210: checking how to convert x86_64-apple-darwin10.7.3 file names
> to toolchain format
> configure:8230: result: func_convert_file_noop
> configure:8237: checking for /usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld
> option to reload object files
> configure:8244: result: -r
> configure:8318: checking for objdump
> configure:8348: result: no
> configure:8374: checking how to recognize dependent libraries
> configure:8576: result: pass_all
> configure:8661: checking for dlltool
> configure:8691: result: no
> configure:8718: checking how to associate runtime and link libraries
> configure:8745: result: printf %s\n
> configure:8805: checking for ar
> configure:8821: found /usr/bin/ar
> configure:8832: result: ar
> configure:8869: checking for archiver @FILE support
> configure:8886: cc -c -g -O2 conftest.c >&5
> configure:8886: $? = 0
> configure:8889: ar cru libconftest.a @conftest.lst >&5
> ar: @conftest.lst: No such file or directory
> configure:8892: $? = 1
> configure:8912: result: no
> configure:8970: checking for strip
> configure:8986: found /usr/bin/strip
> configure:8997: result: strip
> configure:9069: checking for ranlib
> configure:9085: found /usr/bin/ranlib
> configure:9096: result: ranlib
> configure:9198: checking command to parse /usr/bin/nm output from cc object
> configure:9317: cc -c -g -O2 conftest.c >&5
> configure:9320: $? = 0
> configure:9324: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[
> ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' |
> sed '/ __gnu_lto/d' \> conftest.nm
> configure:9327: $? = 0
> cannot find nm_test_var in conftest.nm
> configure:9317: cc -c -g -O2 conftest.c >&5
> configure:9320: $? = 0
> configure:9324: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[
> ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p' |
> sed '/ __gnu_lto/d' \> conftest.nm
> configure:9327: $? = 0
> configure:9393: cc -o conftest -g -O2 conftest.c conftstm.o >&5
> configure:9396: $? = 0
> configure:9434: result: ok
> configure:9471: checking for sysroot
> configure:9501: result: no
> configure:9744: checking for mt
> configure:9774: result: no
> configure:9794: checking if : is a manifest tool
> configure:9800: : '-?'
> configure:9808: result: no
> configure:9864: checking for dsymutil
> configure:9880: found /usr/bin/dsymutil
> configure:9891: result: dsymutil
> configure:9956: checking for nmedit
> configure:9972: found /usr/bin/nmedit
> configure:9983: result: nmedit
> configure:10048: checking for lipo
> configure:10064: found /usr/bin/lipo
> configure:10075: result: lipo
> configure:10140: checking for otool
> configure:10156: found /usr/bin/otool
> configure:10167: result: otool
> configure:10232: checking for otool64
> configure:10262: result: no
> configure:10307: checking for -single_module linker flag
> cc -g -O2 -o libconftest.dylib -dynamiclib -Wl,-single_module conftest.c
> configure:10334: result: yes
> configure:10336: checking for -exported_symbols_list linker flag
> configure:10356: cc -o conftest -g -O2
> -Wl,-exported_symbols_list,conftest.sym conftest.c >&5
> configure:10356: $? = 0
> configure:10366: result: yes
> configure:10368: checking for -force_load linker flag
> cc -g -O2 -c -o conftest.o conftest.c
> ar cru libconftest.a conftest.o
> ranlib libconftest.a
> cc -g -O2 -o conftest conftest.c -Wl,-force_load,./libconftest.a
> configure:10398: result: yes
> configure:10440: checking how to run the C preprocessor
> configure:10471: cc -E conftest.c
> configure:10471: $? = 0
> configure:10485: cc -E conftest.c
> conftest.c:25:28: error: ac_nonexistent.h: No such file or directory
> configure:10485: $? = 1
> configure: failed program was:
> | /* confdefs.h */
> | #define PACKAGE_NAME "netCDF"
> | #define PACKAGE_TARNAME "netcdf"
> | #define PACKAGE_VERSION "4.1.2"
> | #define PACKAGE_STRING "netCDF 4.1.2"
> | #define PACKAGE_BUGREPORT "support-netcdf@xxxxxxxxxxxxxxxx"
> | #define PACKAGE_URL ""
> | #define PACKAGE "netcdf"
> | #define VERSION "4.1.2"
> | #define NCIO_MINBLOCKSIZE 256
> | #define USE_FSYNC 1
> | #define DEFAULT_CHUNK_SIZE 4194304
> | #define MAX_DEFAULT_CACHE_SIZE 67108864
> | #define DEFAULT_CHUNKS_IN_CACHE 10
> | #define CHUNK_CACHE_SIZE 4194304
> | #define CHUNK_CACHE_NELEMS 1009
> | #define CHUNK_CACHE_PREEMPTION 0.75
> | #define USE_DAP 1
> | #define ENABLE_DAP 1
> | #define ENABLE_DAP_REMOTE_TESTS 1
> | #define USE_EXTREME_NUMBERS 1
> | #define TEMP_LARGE "."
> | #define HAVE_CURLOPT_KEYPASSWD 1
> | /* end confdefs.h. */
> | #include <ac_nonexistent.h>
> configure:10510: result: cc -E
> configure:10530: cc -E conftest.c
> configure:10530: $? = 0
> configure:10544: cc -E conftest.c
> conftest.c:25:28: error: ac_nonexistent.h: No such file or directory
> configure:10544: $? = 1
> configure: failed program was:
> | /* confdefs.h */
> | #define PACKAGE_NAME "netCDF"
> | #define PACKAGE_TARNAME "netcdf"
> | #define PACKAGE_VERSION "4.1.2"
> | #define PACKAGE_STRING "netCDF 4.1.2"
> | #define PACKAGE_BUGREPORT "support-netcdf@xxxxxxxxxxxxxxxx"
> | #define PACKAGE_URL ""
> | #define PACKAGE "netcdf"
> | #define VERSION "4.1.2"
> | #define NCIO_MINBLOCKSIZE 256
> | #define USE_FSYNC 1
> | #define DEFAULT_CHUNK_SIZE 4194304
> | #define MAX_DEFAULT_CACHE_SIZE 67108864
> | #define DEFAULT_CHUNKS_IN_CACHE 10
> | #define CHUNK_CACHE_SIZE 4194304
> | #define CHUNK_CACHE_NELEMS 1009
> | #define CHUNK_CACHE_PREEMPTION 0.75
> | #define USE_DAP 1
> | #define ENABLE_DAP 1
> | #define ENABLE_DAP_REMOTE_TESTS 1
> | #define USE_EXTREME_NUMBERS 1
> | #define TEMP_LARGE "."
> | #define HAVE_CURLOPT_KEYPASSWD 1
> | /* end confdefs.h. */
> | #include <ac_nonexistent.h>
> configure:10573: checking for ANSI C header files
> configure:10593: cc -c -g -O2 conftest.c >&5
> configure:10593: $? = 0
> configure:10666: cc -o conftest -g -O2 conftest.c >&5
> configure:10666: $? = 0
> configure:10666: ./conftest
> configure:10666: $? = 0
> configure:10677: result: yes
> configure:10690: checking for sys/types.h
> configure:10690: cc -c -g -O2 conftest.c >&5
> configure:10690: $? = 0
> configure:10690: result: yes
> configure:10690: checking for sys/stat.h
> configure:10690: cc -c -g -O2 conftest.c >&5
> configure:10690: $? = 0
> configure:10690: result: yes
> configure:10690: checking for stdlib.h
> configure:10690: cc -c -g -O2 conftest.c >&5
> configure:10690: $? = 0
> configure:10690: result: yes
> configure:10690: checking for string.h
> configure:10690: cc -c -g -O2 conftest.c >&5
> configure:10690: $? = 0
> configure:10690: result: yes
> configure:10690: checking for memory.h
> configure:10690: cc -c -g -O2 conftest.c >&5
> configure:10690: $? = 0
> configure:10690: result: yes
> configure:10690: checking for strings.h
> configure:10690: cc -c -g -O2 conftest.c >&5
> configure:10690: $? = 0
> configure:10690: result: yes
> configure:10690: checking for inttypes.h
> configure:10690: cc -c -g -O2 conftest.c >&5
> configure:10690: $? = 0
> configure:10690: result: yes
> configure:10690: checking for stdint.h
> configure:10690: cc -c -g -O2 conftest.c >&5
> configure:10690: $? = 0
> configure:10690: result: yes
> configure:10690: checking for unistd.h
> configure:10690: cc -c -g -O2 conftest.c >&5
> configure:10690: $? = 0
> configure:10690: result: yes
> configure:10704: checking for dlfcn.h
> configure:10704: cc -c -g -O2 conftest.c >&5
> configure:10704: $? = 0
> configure:10704: result: yes
> configure:11201: checking for objdir
> configure:11216: result: .libs
> configure:11487: checking if cc supports -fno-rtti -fno-exceptions
> configure:11505: cc -c -g -O2 -fno-rtti -fno-exceptions conftest.c >&5
> cc1: warning: command line option "-fno-rtti" is valid for C++/ObjC++ but not
> for C
> configure:11509: $? = 0
> configure:11522: result: no
> configure:11832: checking for cc option to produce PIC
> configure:11839: result: -fno-common -DPIC
> configure:11847: checking if cc PIC flag -fno-common -DPIC works
> configure:11865: cc -c -g -O2 -fno-common -DPIC -DPIC conftest.c >&5
> configure:11869: $? = 0
> configure:11882: result: yes
> configure:11911: checking if cc static flag -static works
> configure:11939: result: no
> configure:11954: checking if cc supports -c -o file.o
> configure:11975: cc -c -g -O2 -o out/conftest2.o conftest.c >&5
> configure:11979: $? = 0
> configure:12001: result: yes
> configure:12009: checking if cc supports -c -o file.o
> configure:12056: result: yes
> configure:12089: checking whether the cc linker
> (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries
> configure:13247: result: yes
> configure:13492: checking dynamic linker characteristics
> configure:14228: result: darwin10.7.3 dyld
> configure:14335: checking how to hardcode library paths into programs
> configure:14360: result: immediate
> configure:14900: checking whether stripping libraries is possible
> configure:14914: result: yes
> configure:14940: checking if libtool supports shared libraries
> configure:14942: result: yes
> configure:14945: checking whether to build shared libraries
> configure:14966: result: yes
> configure:14969: checking whether to build static libraries
> configure:14973: result: yes
> configure:14996: checking how to run the C++ preprocessor
> configure:15023: g++ -E conftest.cpp
> configure:15023: $? = 0
> configure:15037: g++ -E conftest.cpp
> conftest.cpp:37:28: error: ac_nonexistent.h: No such file or directory
> configure:15037: $? = 1
> configure: failed program was:
> | /* confdefs.h */
> | #define PACKAGE_NAME "netCDF"
> | #define PACKAGE_TARNAME "netcdf"
> | #define PACKAGE_VERSION "4.1.2"
> | #define PACKAGE_STRING "netCDF 4.1.2"
> | #define PACKAGE_BUGREPORT "support-netcdf@xxxxxxxxxxxxxxxx"
> | #define PACKAGE_URL ""
> | #define PACKAGE "netcdf"
> | #define VERSION "4.1.2"
> | #define NCIO_MINBLOCKSIZE 256
> | #define USE_FSYNC 1
> | #define DEFAULT_CHUNK_SIZE 4194304
> | #define MAX_DEFAULT_CACHE_SIZE 67108864
> | #define DEFAULT_CHUNKS_IN_CACHE 10
> | #define CHUNK_CACHE_SIZE 4194304
> | #define CHUNK_CACHE_NELEMS 1009
> | #define CHUNK_CACHE_PREEMPTION 0.75
> | #define USE_DAP 1
> | #define ENABLE_DAP 1
> | #define ENABLE_DAP_REMOTE_TESTS 1
> | #define USE_EXTREME_NUMBERS 1
> | #define TEMP_LARGE "."
> | #define HAVE_CURLOPT_KEYPASSWD 1
> | #define STDC_HEADERS 1
> | #define HAVE_SYS_TYPES_H 1
> | #define HAVE_SYS_STAT_H 1
> | #define HAVE_STDLIB_H 1
> | #define HAVE_STRING_H 1
> | #define HAVE_MEMORY_H 1
> | #define HAVE_STRINGS_H 1
> | #define HAVE_INTTYPES_H 1
> | #define HAVE_STDINT_H 1
> | #define HAVE_UNISTD_H 1
> | #define HAVE_DLFCN_H 1
> | #define LT_OBJDIR ".libs/"
> | /* end confdefs.h. */
> | #include <ac_nonexistent.h>
> configure:15062: result: g++ -E
> configure:15082: g++ -E conftest.cpp
> configure:15082: $? = 0
> configure:15096: g++ -E conftest.cpp
> conftest.cpp:37:28: error: ac_nonexistent.h: No such file or directory
> configure:15096: $? = 1
> configure: failed program was:
> | /* confdefs.h */
> | #define PACKAGE_NAME "netCDF"
> | #define PACKAGE_TARNAME "netcdf"
> | #define PACKAGE_VERSION "4.1.2"
> | #define PACKAGE_STRING "netCDF 4.1.2"
> | #define PACKAGE_BUGREPORT "support-netcdf@xxxxxxxxxxxxxxxx"
> | #define PACKAGE_URL ""
> | #define PACKAGE "netcdf"
> | #define VERSION "4.1.2"
> | #define NCIO_MINBLOCKSIZE 256
> | #define USE_FSYNC 1
> | #define DEFAULT_CHUNK_SIZE 4194304
> | #define MAX_DEFAULT_CACHE_SIZE 67108864
> | #define DEFAULT_CHUNKS_IN_CACHE 10
> | #define CHUNK_CACHE_SIZE 4194304
> | #define CHUNK_CACHE_NELEMS 1009
> | #define CHUNK_CACHE_PREEMPTION 0.75
> | #define USE_DAP 1
> | #define ENABLE_DAP 1
> | #define ENABLE_DAP_REMOTE_TESTS 1
> | #define USE_EXTREME_NUMBERS 1
> | #define TEMP_LARGE "."
> | #define HAVE_CURLOPT_KEYPASSWD 1
> | #define STDC_HEADERS 1
> | #define HAVE_SYS_TYPES_H 1
> | #define HAVE_SYS_STAT_H 1
> | #define HAVE_STDLIB_H 1
> | #define HAVE_STRING_H 1
> | #define HAVE_MEMORY_H 1
> | #define HAVE_STRINGS_H 1
> | #define HAVE_INTTYPES_H 1
> | #define HAVE_STDINT_H 1
> | #define HAVE_UNISTD_H 1
> | #define HAVE_DLFCN_H 1
> | #define LT_OBJDIR ".libs/"
> | /* end confdefs.h. */
> | #include <ac_nonexistent.h>
> configure:15266: checking for ld used by g++
> configure:15333: result: /usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld
> configure:15340: checking if the linker
> (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) is GNU ld
> configure:15355: result: no
> configure:15410: checking whether the g++ linker
> (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries
> configure:16414: result: yes
> configure:16449: g++ -c -g -O2 conftest.cpp >&5
> configure:16452: $? = 0
> configure:16972: checking for g++ option to produce PIC
> configure:16979: result: -fno-common -DPIC
> configure:16987: checking if g++ PIC flag -fno-common -DPIC works
> configure:17005: g++ -c -g -O2 -fno-common -DPIC -DPIC conftest.cpp >&5
> configure:17009: $? = 0
> configure:17022: result: yes
> configure:17045: checking if g++ static flag -static works
> configure:17073: result: no
> configure:17085: checking if g++ supports -c -o file.o
> configure:17106: g++ -c -g -O2 -o out/conftest2.o conftest.cpp >&5
> configure:17110: $? = 0
> configure:17132: result: yes
> configure:17137: checking if g++ supports -c -o file.o
> configure:17184: result: yes
> configure:17214: checking whether the g++ linker
> (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries
> configure:17248: result: yes
> configure:17391: checking dynamic linker characteristics
> configure:18061: result: darwin10.7.3 dyld
> configure:18114: checking how to hardcode library paths into programs
> configure:18139: result: immediate
> configure:18288: checking if libtool supports shared libraries
> configure:18290: result: yes
> configure:18293: checking whether to build shared libraries
> configure:18313: result: yes
> configure:18316: checking whether to build static libraries
> configure:18320: result: yes
> configure:18624: checking for gfortran option to produce PIC
> configure:18631: result: -fno-common
> configure:18639: checking if gfortran PIC flag -fno-common works
> configure:18657: gfortran -c -g -O2 -fno-common conftest.f >&5
> configure:18661: $? = 0
> configure:18674: result: yes
> configure:18697: checking if gfortran static flag -static works
> configure:18725: result: no
> configure:18737: checking if gfortran supports -c -o file.o
> configure:18758: gfortran -c -g -O2 -o out/conftest2.o conftest.f >&5
> configure:18762: $? = 0
> configure:18784: result: yes
> configure:18789: checking if gfortran supports -c -o file.o
> configure:18836: result: yes
> configure:18866: checking whether the gfortran linker
> (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries
> configure:19974: result: yes
> configure:20117: checking dynamic linker characteristics
> configure:20781: result: darwin10.7.3 dyld
> configure:20834: checking how to hardcode library paths into programs
> configure:20859: result: immediate
> configure:21004: checking if libtool supports shared libraries
> configure:21006: result: yes
> configure:21009: checking whether to build shared libraries
> configure:21029: result: yes
> configure:21032: checking whether to build static libraries
> configure:21036: result: yes
> configure:21069: gfortran -c -g -O2 conftest.f90 >&5
> configure:21072: $? = 0
> configure:21484: checking for gfortran option to produce PIC
> configure:21491: result: -fno-common
> configure:21499: checking if gfortran PIC flag -fno-common works
> configure:21517: gfortran -c -g -O2 -fno-common conftest.f90 >&5
> configure:21521: $? = 0
> configure:21534: result: yes
> configure:21557: checking if gfortran static flag -static works
> configure:21585: result: no
> configure:21597: checking if gfortran supports -c -o file.o
> configure:21618: gfortran -c -g -O2 -o out/conftest2.o conftest.f90 >&5
> configure:21622: $? = 0
> configure:21644: result: yes
> configure:21649: checking if gfortran supports -c -o file.o
> configure:21696: result: yes
> configure:21726: checking whether the gfortran linker
> (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries
> configure:22834: result: yes
> configure:22977: checking dynamic linker characteristics
> configure:23641: result: darwin10.7.3 dyld
> configure:23694: checking how to hardcode library paths into programs
> configure:23719: result: immediate
> configure:23778: finding other utilities
> configure:23784: trying to set fortran flags for this platform
> configure:23833: checking for special C compiler options needed for large
> files
> configure:23878: result: no
> configure:23884: checking for _FILE_OFFSET_BITS value needed for large files
> configure:23909: cc -c -g -O2 conftest.c >&5
> configure:23909: $? = 0
> configure:23941: result: no
> configure:24025: displaying some results
> configure:24031: checking CPPFLAGS
> configure:24033: result:
> configure:24035: checking CC CFLAGS
> configure:24037: result: cc -g -O2
> configure:24040: checking type cc
> configure:24042: result: cc is hashed (/usr/bin/cc)
> configure:24045: checking CXX
> configure:24048: result: g++
> configure:24050: checking CXXFLAGS
> configure:24052: result: -g -O2
> configure:24055: checking type g++
> configure:24057: result: g++ is /usr/bin/g++
> configure:24064: checking FC
> configure:24067: result: gfortran
> configure:24069: checking FFLAGS
> configure:24071: result: -g -O2
> configure:24074: checking type gfortran
> configure:24076: result: gfortran is /usr/local/bin/gfortran
> configure:24083: checking F90
> configure:24086: result: gfortran
> configure:24088: checking FCFLAGS
> configure:24090: result: -g -O2
> configure:24093: checking type gfortran
> configure:24095: result: gfortran is /usr/local/bin/gfortran
> configure:24102: checking AR
> configure:24105: result: ar
> configure:24107: checking AR_FLAGS
> configure:24109: result: cru
> configure:24112: checking type ar
> configure:24114: result: ar is hashed (/usr/bin/ar)
> configure:24121: checking NM
> configure:24124: result: /usr/bin/nm
> configure:24126: checking NMFLAGS
> configure:24128: result:
> configure:24200: checking for /usr/bin/nm
> configure:24227: result: /usr/bin/nm
> configure:24240: checking nm flags
> configure:24245: result:
> configure:24257: checking for C-equivalent to Fortran routine "SUB"
> configure:24264: gfortran -c -g -O2 conftest.f
> configure:24267: $? = 0
> configure:24277: result: sub_
> configure:24297: checking for Fortran "byte"
> configure:24305: gfortran -c -g -O2 conftest.f
> configure:24308: $? = 0
> configure:24310: result: yes
> configure:24328: checking for Fortran "integer*2"
> configure:24336: gfortran -c -g -O2 conftest.f
> configure:24339: $? = 0
> configure:24341: result: yes
> configure:24368: checking if Fortran "byte" is C "signed char"
> configure:24378: cc -c -g -O2 conftest.c
> conftest.c: In function 'sub_':
> conftest.c:4: warning: incompatible implicit declaration of built-in function
> 'exit'
> configure:24381: $? = 0
> configure:24384: gfortran -g -O2 -c conftestf.f
> configure:24387: $? = 0
> configure:24390: gfortran -o conftest -g -O2 conftestf.o conftest.o
> ld: warning: in conftest.o, file was built for unsupported file format which
> is not the architecture being linked (i386)
> Undefined symbols:
> "_sub_", referenced from:
> _MAIN__ in conftestf.o
> ld: symbol(s) not found
> collect2: ld returned 1 exit status
> configure:24393: $? = 1
> configure:24416: error: Could not link conftestf.o and conftest.o
>
> ## ---------------- ##
> ## Cache variables. ##
> ## ---------------- ##
>
> ac_cv_build=x86_64-apple-darwin10.7.3
> ac_cv_c_compiler_gnu=yes
> ac_cv_c_const=yes
> ac_cv_cxx_compiler_gnu=yes
> ac_cv_env_CCC_set=
> ac_cv_env_CCC_value=
> ac_cv_env_CC_set=
> ac_cv_env_CC_value=
> ac_cv_env_CFLAGS_set=
> ac_cv_env_CFLAGS_value=
> ac_cv_env_CPPFLAGS_set=
> ac_cv_env_CPPFLAGS_value=
> ac_cv_env_CPP_set=
> ac_cv_env_CPP_value=
> ac_cv_env_CXXCPP_set=
> ac_cv_env_CXXCPP_value=
> ac_cv_env_CXXFLAGS_set=
> ac_cv_env_CXXFLAGS_value=
> ac_cv_env_CXX_set=
> ac_cv_env_CXX_value=
> ac_cv_env_F77_set=
> ac_cv_env_F77_value=
> ac_cv_env_FCFLAGS_set=
> ac_cv_env_FCFLAGS_value=
> ac_cv_env_FC_set=
> ac_cv_env_FC_value=
> ac_cv_env_FFLAGS_set=
> ac_cv_env_FFLAGS_value=
> ac_cv_env_LDFLAGS_set=
> ac_cv_env_LDFLAGS_value=
> ac_cv_env_LIBS_set=
> ac_cv_env_LIBS_value=
> ac_cv_env_build_alias_set=
> ac_cv_env_build_alias_value=
> ac_cv_env_host_alias_set=
> ac_cv_env_host_alias_value=
> ac_cv_env_target_alias_set=
> ac_cv_env_target_alias_value=
> ac_cv_f77_compiler_gnu=yes
> ac_cv_fc_compiler_gnu=yes
> ac_cv_fc_srcext_f90=none
> ac_cv_header_dlfcn_h=yes
> ac_cv_header_inttypes_h=yes
> ac_cv_header_memory_h=yes
> ac_cv_header_stdc=yes
> ac_cv_header_stdint_h=yes
> ac_cv_header_stdlib_h=yes
> ac_cv_header_string_h=yes
> ac_cv_header_strings_h=yes
> ac_cv_header_sys_stat_h=yes
> ac_cv_header_sys_types_h=yes
> ac_cv_header_unistd_h=yes
> ac_cv_host=x86_64-apple-darwin10.7.3
> ac_cv_objext=o
> ac_cv_path_EGREP='/usr/bin/grep -E'
> ac_cv_path_FGREP='/usr/bin/grep -F'
> ac_cv_path_GREP=/usr/bin/grep
> ac_cv_path_SED=/usr/bin/sed
> ac_cv_path_install='/usr/bin/install -c'
> ac_cv_prog_AWK=awk
> ac_cv_prog_CPP='cc -E'
> ac_cv_prog_CXXCPP='g++ -E'
> ac_cv_prog_NM=/usr/bin/nm
> ac_cv_prog_ac_ct_AR=ar
> ac_cv_prog_ac_ct_CC=cc
> ac_cv_prog_ac_ct_CXX=g++
> ac_cv_prog_ac_ct_DSYMUTIL=dsymutil
> ac_cv_prog_ac_ct_F77=gfortran
> ac_cv_prog_ac_ct_FC=gfortran
> ac_cv_prog_ac_ct_LIPO=lipo
> ac_cv_prog_ac_ct_NMEDIT=nmedit
> ac_cv_prog_ac_ct_OTOOL=otool
> ac_cv_prog_ac_ct_RANLIB=ranlib
> ac_cv_prog_ac_ct_STRIP=strip
> ac_cv_prog_cc_c89=
> ac_cv_prog_cc_cc_c_o=yes
> ac_cv_prog_cc_g=yes
> ac_cv_prog_cxx_g=yes
> ac_cv_prog_f77_g=yes
> ac_cv_prog_f90_uppercase_mod=no
> ac_cv_prog_fc_g=yes
> ac_cv_prog_make_make_set=yes
> ac_cv_sys_file_offset_bits=no
> ac_cv_sys_largefile_CC=no
> ac_cv_target=x86_64-apple-darwin10.7.3
> am_cv_CC_dependencies_compiler_type=gcc3
> am_cv_CXX_dependencies_compiler_type=gcc3
> ax_cv_f90_modflag=-I
> lt_cv_apple_cc_single_mod=yes
> lt_cv_ar_at_file=no
> lt_cv_deplibs_check_method=pass_all
> lt_cv_file_magic_cmd='$MAGIC_CMD'
> lt_cv_file_magic_test_file=
> lt_cv_ld_exported_symbols_list=yes
> lt_cv_ld_force_load=no
> lt_cv_ld_reload_flag=-r
> lt_cv_nm_interface='BSD nm'
> lt_cv_objdir=.libs
> lt_cv_path_LD=/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld
> lt_cv_path_LDCXX=/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld
> lt_cv_path_NM=/usr/bin/nm
> lt_cv_path_mainfest_tool=no
> lt_cv_prog_compiler_c_o=yes
> lt_cv_prog_compiler_c_o_CXX=yes
> lt_cv_prog_compiler_c_o_F77=yes
> lt_cv_prog_compiler_c_o_FC=yes
> lt_cv_prog_compiler_pic='-fno-common -DPIC'
> lt_cv_prog_compiler_pic_CXX='-fno-common -DPIC'
> lt_cv_prog_compiler_pic_F77=-fno-common
> lt_cv_prog_compiler_pic_FC=-fno-common
> lt_cv_prog_compiler_pic_works=yes
> lt_cv_prog_compiler_pic_works_CXX=yes
> lt_cv_prog_compiler_pic_works_F77=yes
> lt_cv_prog_compiler_pic_works_FC=yes
> lt_cv_prog_compiler_rtti_exceptions=no
> lt_cv_prog_compiler_static_works=no
> lt_cv_prog_compiler_static_works_CXX=no
> lt_cv_prog_compiler_static_works_F77=no
> lt_cv_prog_compiler_static_works_FC=no
> lt_cv_prog_gnu_ld=no
> lt_cv_prog_gnu_ldcxx=no
> lt_cv_sharedlib_from_linklib_cmd='printf %s\n'
> lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[
> ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2
> \2/p'\'' | sed '\''/ __gnu_lto/d'\'''
> lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/
> {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \([^ ]*\)$/
> {"\2", (void *) \&\2},/p'\'''
> lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^
> ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\)
> \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\)
> \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\'''
> lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int
> \1();/p'\'' -e '\''s/^[BCDEGRST]* .* \(.*\)$/extern char \1;/p'\'''
> lt_cv_sys_max_cmd_len=196608
> lt_cv_to_host_file_cmd=func_convert_file_noop
> lt_cv_to_tool_file_cmd=func_convert_file_noop
>
> ## ----------------- ##
> ## Output variables. ##
> ## ----------------- ##
>
> ACLOCAL='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/missing --run
> aclocal-1.11'
> ALLOCA=''
> AMDEPBACKSLASH='\'
> AMDEP_FALSE='#'
> AMDEP_TRUE=''
> AMTAR='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/missing --run tar'
> AR='ar'
> AS='as'
> AUTOCONF='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/missing --run autoconf'
> AUTOHEADER='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/missing --run
> autoheader'
> AUTOMAKE='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/missing --run
> automake-1.11'
> AWK='awk'
> BINFILE_NAME=''
> BUILD_BENCHMARKS_FALSE=''
> BUILD_BENCHMARKS_TRUE='#'
> BUILD_CDMREMOTE_FALSE=''
> BUILD_CDMREMOTE_TRUE=''
> BUILD_CXX4_FALSE=''
> BUILD_CXX4_TRUE=''
> BUILD_CXX_FALSE='#'
> BUILD_CXX_TRUE=''
> BUILD_C_FALSE='#'
> BUILD_C_TRUE=''
> BUILD_DAP_FALSE=''
> BUILD_DAP_TRUE=''
> BUILD_DLL_FALSE=''
> BUILD_DLL_TRUE='#'
> BUILD_EXAMPLES_FALSE='#'
> BUILD_EXAMPLES_TRUE=''
> BUILD_F77_FALSE='#'
> BUILD_F77_TRUE=''
> BUILD_F90_FALSE='#'
> BUILD_F90_TRUE=''
> BUILD_LIBCF_FALSE=''
> BUILD_LIBCF_TRUE=''
> BUILD_PARALLEL_FALSE=''
> BUILD_PARALLEL_TRUE=''
> BUILD_SEPARATE_FORTRAN_FALSE='#'
> BUILD_SEPARATE_FORTRAN_TRUE=''
> BUILD_UDUNITS_FALSE=''
> BUILD_UDUNITS_TRUE=''
> BUILD_UTILITIES_FALSE='#'
> BUILD_UTILITIES_TRUE=''
> BUILD_V2_FALSE='#'
> BUILD_V2_TRUE=''
> CC='cc'
> CCDEPMODE='depmode=gcc3'
> CFLAGS='-g -O2'
> CPP='cc -E'
> CPPFLAGS=''
> CROSS_COMPILING_FALSE=''
> CROSS_COMPILING_TRUE=''
> CURLDIR='/usr'
> CURL_CFLAGS=''
> CURL_FCFLAGS=''
> CURL_FFLAGS=''
> CURL_LIBS='-lcurl'
> CXX='g++'
> CXXCPP='g++ -E'
> CXXDEPMODE='depmode=gcc3'
> CXXFLAGS='-g -O2'
> CYGPATH_W='echo'
> DEFS=''
> DEPDIR='.deps'
> DLLTOOL='false'
> DSYMUTIL='dsymutil'
> DUMPBIN=''
> ECHO_C='\c'
> ECHO_N=''
> ECHO_T=''
> EGREP='/usr/bin/grep -E'
> ENABLE_DAP_LONG_TESTS_FALSE=''
> ENABLE_DAP_LONG_TESTS_TRUE=''
> ENABLE_DAP_REMOTE_TESTS_FALSE=''
> ENABLE_DAP_REMOTE_TESTS_TRUE=''
> EXEEXT=''
> EXTERN_CFLAGS=''
> EXTERN_CPPFLAGS=''
> EXTERN_LDFLAGS=''
> EXTRA_EXAMPLE_TESTS_FALSE=''
> EXTRA_EXAMPLE_TESTS_TRUE=''
> EXTRA_TESTS_FALSE=''
> EXTRA_TESTS_TRUE='#'
> F77='gfortran'
> FC='gfortran'
> FCFLAGS='-g -O2'
> FCFLAGS_f90=''
> FFLAGS='-g -O2'
> FGREP='/usr/bin/grep -F'
> FTPBINDIR=''
> GREP='/usr/bin/grep'
> HAS_CXX=''
> HAS_DAP=''
> HAS_F77=''
> HAS_F90=''
> HAS_HDF4=''
> HAS_HDF5=''
> HAS_NC2=''
> HAS_NC4=''
> HAS_PNETCDF=''
> HAS_SZLIB=''
> HDF4DIR=''
> HDF5DIR=''
> INSTALL_DATA='${INSTALL} -m 644'
> INSTALL_PROGRAM='${INSTALL}'
> INSTALL_SCRIPT='${INSTALL}'
> INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
> INTERNAL_OCLIB_FALSE='#'
> INTERNAL_OCLIB_TRUE=''
> LARGE_FILE_TESTS_FALSE=''
> LARGE_FILE_TESTS_TRUE='#'
> LD='/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld'
> LDFLAGS=''
> LIBOBJS=''
> LIBS=''
> LIBTOOL='$(SHELL) $(top_builddir)/libtool'
> LIPO='lipo'
> LN_S='ln -s'
> LTLIBOBJS=''
> MAKEINFO='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/missing --run makeinfo'
> MAKEWHATIS_CMD=''
> MANIFEST_TOOL=':'
> MKDIR_P='./install-sh -c -d'
> MOD_FLAG='-I'
> NC_FLIBS=''
> NC_LIBS=''
> NETCDF_C_LIB=''
> NM='/usr/bin/nm'
> NMEDIT='nmedit'
> NMFLAGS=''
> OBJDUMP='false'
> OBJEXT='o'
> OTOOL64=':'
> OTOOL='otool'
> PACKAGE='netcdf'
> PACKAGE_BUGREPORT='support-netcdf@xxxxxxxxxxxxxxxx'
> PACKAGE_NAME='netCDF'
> PACKAGE_STRING='netCDF 4.1.2'
> PACKAGE_TARNAME='netcdf'
> PACKAGE_URL=''
> PACKAGE_VERSION='4.1.2'
> PATH_SEPARATOR=':'
> PNETCDFDIR=''
> RANLIB='ranlib'
> SED='/usr/bin/sed'
> SET_MAKE=''
> SHELL='/bin/sh'
> STRIP='strip'
> SZLIBDIR=''
> TEST_F77_FALSE='#'
> TEST_F77_TRUE=''
> TEST_PARALLEL_FALSE=''
> TEST_PARALLEL_TRUE=''
> UPPER_CASE_MOD_FALSE=''
> UPPER_CASE_MOD_TRUE=''
> USE_DAP_FALSE=''
> USE_DAP_TRUE=''
> USE_DISPATCH_FALSE=''
> USE_DISPATCH_TRUE=''
> USE_FFIO_FALSE=''
> USE_FFIO_TRUE='#'
> USE_HDF4_DIR_FALSE=''
> USE_HDF4_DIR_TRUE=''
> USE_HDF4_FALSE=''
> USE_HDF4_FILE_TESTS_FALSE=''
> USE_HDF4_FILE_TESTS_TRUE=''
> USE_HDF4_TRUE=''
> USE_HDF5_DIR_FALSE=''
> USE_HDF5_DIR_TRUE=''
> USE_LOGGING_FALSE=''
> USE_LOGGING_TRUE=''
> USE_NETCDF4_FALSE=''
> USE_NETCDF4_TRUE=''
> USE_NETCDF_C_LIB_DIR_FALSE=''
> USE_NETCDF_C_LIB_DIR_TRUE='#'
> USE_PNETCDF_DIR_FALSE=''
> USE_PNETCDF_DIR_TRUE=''
> USE_PNETCDF_FALSE=''
> USE_PNETCDF_TRUE=''
> USE_RENAMEV3_FALSE=''
> USE_RENAMEV3_TRUE=''
> USE_SZIP_FALSE=''
> USE_SZIP_TRUE=''
> USE_SZLIB_DIR_FALSE=''
> USE_SZLIB_DIR_TRUE=''
> USE_VALGRIND_TESTS_FALSE=''
> USE_VALGRIND_TESTS_TRUE=''
> USE_ZLIB_DIR_FALSE=''
> USE_ZLIB_DIR_TRUE=''
> VERSION='4.1.2'
> WHATIS=''
> ZLIBDIR=''
> ac_ct_AR='ar'
> ac_ct_CC='cc'
> ac_ct_CXX='g++'
> ac_ct_DUMPBIN=''
> ac_ct_F77='gfortran'
> ac_ct_FC='gfortran'
> am__EXEEXT_FALSE=''
> am__EXEEXT_TRUE=''
> am__fastdepCC_FALSE='#'
> am__fastdepCC_TRUE=''
> am__fastdepCXX_FALSE='#'
> am__fastdepCXX_TRUE=''
> am__include='include'
> am__isrc=''
> am__leading_dot='.'
> am__quote=''
> am__tar='${AMTAR} chof - "$$tardir"'
> am__untar='${AMTAR} xf -'
> bindir='${exec_prefix}/bin'
> build='x86_64-apple-darwin10.7.3'
> build_alias=''
> build_cpu='x86_64'
> build_os='darwin10.7.3'
> build_vendor='apple'
> datadir='${datarootdir}'
> datarootdir='${prefix}/share'
> docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
> dvidir='${docdir}'
> exec_prefix='NONE'
> host='x86_64-apple-darwin10.7.3'
> host_alias=''
> host_cpu='x86_64'
> host_os='darwin10.7.3'
> host_vendor='apple'
> htmldir='${docdir}'
> includedir='${prefix}/include'
> infodir='${datarootdir}/info'
> install_sh='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/install-sh'
> libdir='${exec_prefix}/lib'
> libexecdir='${exec_prefix}/libexec'
> localedir='${datarootdir}/locale'
> localstatedir='${prefix}/var'
> mandir='${datarootdir}/man'
> mkdir_p='$(top_builddir)/./install-sh -c -d'
> oldincludedir='/usr/include'
> pdfdir='${docdir}'
> prefix='/lib'
> prog=''
> program_transform_name='s,x,x,'
> psdir='${docdir}'
> sbindir='${exec_prefix}/sbin'
> sharedstatedir='${prefix}/com'
> subdirs=''
> sysconfdir='${prefix}/etc'
> target='x86_64-apple-darwin10.7.3'
> target_alias=''
> target_cpu='x86_64'
> target_os='darwin10.7.3'
> target_vendor='apple'
>
> ## ----------- ##
> ## confdefs.h. ##
> ## ----------- ##
>
> /* confdefs.h */
> #define PACKAGE_NAME "netCDF"
> #define PACKAGE_TARNAME "netcdf"
> #define PACKAGE_VERSION "4.1.2"
> #define PACKAGE_STRING "netCDF 4.1.2"
> #define PACKAGE_BUGREPORT "support-netcdf@xxxxxxxxxxxxxxxx"
> #define PACKAGE_URL ""
> #define PACKAGE "netcdf"
> #define VERSION "4.1.2"
> #define NCIO_MINBLOCKSIZE 256
> #define USE_FSYNC 1
> #define DEFAULT_CHUNK_SIZE 4194304
> #define MAX_DEFAULT_CACHE_SIZE 67108864
> #define DEFAULT_CHUNKS_IN_CACHE 10
> #define CHUNK_CACHE_SIZE 4194304
> #define CHUNK_CACHE_NELEMS 1009
> #define CHUNK_CACHE_PREEMPTION 0.75
> #define USE_DAP 1
> #define ENABLE_DAP 1
> #define ENABLE_DAP_REMOTE_TESTS 1
> #define USE_EXTREME_NUMBERS 1
> #define TEMP_LARGE "."
> #define HAVE_CURLOPT_KEYPASSWD 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define pgiFortran 1
> #define NF_INT1_T byte
> #define NF_INT2_T integer*2
>
> configure: exit 1
> _______________________________________________
> netcdfgroup mailing list
> netcdfgroup@xxxxxxxxxxxxxxxx
> For list information or to unsubscribe, visit:
> http://www.unidata.ucar.edu/mailing_lists/
**********************
"The contents of this message do not reflect any position of the U.S.
Government or NOAA."
**********************
Roy Mendelssohn
Supervisory Operations Research Analyst
NOAA/NMFS
Environmental Research Division
Southwest Fisheries Science Center
1352 Lighthouse Avenue
Pacific Grove, CA 93950-2097
e-mail: Roy.Mendelssohn@xxxxxxxx (Note new e-mail address)
voice: (831)-648-9029
fax: (831)-648-8440
www: http://www.pfeg.noaa.gov/
"Old age and treachery will overcome youth and skill."
"From those who have been given much, much will be expected"
