Re: [netcdfgroup] Configure error while installing netCDF with Hdf5

Many thanks Dr. Bhupendra, I have finally got the Congratulations message !!

On Fri, Jul 10, 2015 at 6:21 AM, Bhupendra Raut <bhupendraraut@xxxxxxxxx>
wrote:

> Hi
> I am attaching my notes on netcdf installation with hdf5. Have a look at
> it and see if your issue gets resolve. These are not perfect expert notes
> but may help you.
>
> *INSTALLATION*
> I made two directories as follow
> /opt/hdf5/ and /opt/netcdf/
>
> 1. *Install zlib in hdf5 directory:*
> cd  /source/code/folder
> ./configure  --prefix=/opt/hdf5
>
> 2. *Get source code from hdf website and un-tar it (**Don't use binaries)*
> $ cd hdf5-X.Y.Z
>
> Do this only if you get an error.
>        -For Mac OSX Snow Leopard, Lion and Mountain Lion (before Mavericks)
>                 vi ./config/gnu-flags/
>           change following line
>                  gcc-4.*)
>                  PROD_CFLAGS="-O0”
>                     OR (if gnu-flags file is missing)
>                   CFLAGS=-O0 ./configure
> For Linux and Mac OSX Mavericks it worked without above changes
>
> 3.   *For fortran & cpp support with compression*
>                ./configure --prefix=/opt/hdf5/ --enable-fortran
> --enable-cxx --with-zlib=/opt/hdf5/
>
> These check-tests should not be failed!
> Always run these commands in the same order as below.
>    $ sudo make
>    $ sudo make check                # run test suite.
>    $ sudo make install               #install the library
>    $ sudo make check-install        # verify installation.
>
>
> *4. In netcdf source directory*
> CPPFLAGS=-I/opt/hdf5/include/ LDFLAGS=-L/opt/hdf5/lib/ ./configure
> --prefix=/opt/netcdf/ --enable-netcdf-4
> sudo make check install
> If successful it will show a congratulatory message.
>
>
> Bhupendra Raut
> (Research Fellow)
> School of Earth, Atmosphere and Environment
> 9, Rainforest Walk
> Monash University
> Clayton 3800
> Victoria, Australia
> Website: www.baraut.info
>
> On Fri, Jul 10, 2015 at 3:32 AM, jv sharma <jvnanoman@xxxxxxxxx> wrote:
>
>> Dear Experts,
>>
>> I get the below error:
>>
>> configure: error: Compiling a test with HDF5 failed.  Either hdf5.h
>> cannot be found, or config.log should be checked for other reason.
>> jv@jv-desktop:~/netcdf-c-4.3.3.1$
>>
>> Attached here the config.log file. I have installed hdf5-1.8.15-patch1.
>>
>> Please help me to get out of this.
>> Many thanks.
>>
>> Best regards,
>> JVN Sarma.
>>
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>>
>
>
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