The command That gave the NPE was using a relative path to "tdm-4.6.jar"
Sor right~ who knows what jar It might have been using.
Chaning to absolute:
java -classpath /home/tomcat/dans-tdm-content/content/tdm/tdm-4.6.jar
thredds.tdm.GCpass1 -regexp "\d{6}/\d{8}/YTU..._KWBN_\d*$" -rootDir
'/global/dataset/model/ndfd/' -useCacheDir
'/raid/tomcat/tdm45/cache-dev/GribIndex' -isGrib2
Where: md5sum /home/tomcat/dans-tdm-content/content/tdm/tdm-4.6.jar =
c97a881c1a7960df2c366d04e9ea5f1b
Is now initiating successfully.
Thanks.
On Wed, Nov 11, 2015 at 5:45 PM, Christian Ward-Garrison <cwardgar@xxxxxxxx>
wrote:
> Oops, that link should be:
> ftp://ftp.unidata.ucar.edu/pub/thredds/4.6/current/tdm-4.6.jar
>
> On Wed, Nov 11, 2015 at 3:44 PM, Christian Ward-Garrison <
> cwardgar@xxxxxxxx> wrote:
>
>> Hi Dan,
>>
>> I cannot recreate this issue in the latest release of tdm (v4.6.3).
>> That's really weird because the hash you gave for tdm-4.6.jar is the same
>> one I have (c97a881c1a7960df2c366d04e9ea5f1b), and yet the line numbers in
>> the stack trace don't make sense (many of them correspond to lines that
>> aren't even executable).
>>
>> This may be a dumb question, but are you absolutely sure that you're
>> using the latest version [1]? As a sanity check, it might help to download
>> a fresh copy and try again.
>>
>> Cheers,
>> Christian
>>
>> [1] ftp://ftp.unidata.ucar.edu/pub/thredds/4.6/current/thredds.war
>>
>> On Wed, Nov 4, 2015 at 8:03 AM, Dan Swank - NOAA Affiliate <
>> dan.swank@xxxxxxxx> wrote:
>>
>>> Right, I thought that would do it, but now:
>>>
>>> java -Xmx4g -classpath tdm-4.6.jar thredds.tdm.GCpass1 -isGrib2 -regexp
>>> "\d{6}/\d{8}/YTU..._KWBN_\d*$" -rootDir "/global/dataset/model/ndfd/"
>>> -useCacheDir "/raid/tomcat/tdm45/cache-dev/GribIndex" > gcpass1.outfile
>>>
>>>
>>> Exception in thread "main" java.lang.NullPointerException
>>> at
>>> thredds.inventory.CollectionSpecParser.<init>(CollectionSpecParser.java:81)
>>> at thredds.tdm.GCpass1.scanAndReport(GCpass1.java:218)
>>> at thredds.tdm.GCpass1.main(GCpass1.java:75)
>>>
>>> Not sure if this is more with the argument parser
>>> or a problem diving into the actual process.
>>>
>>>
>>> On Tue, Nov 3, 2015 at 5:00 PM, Christian Ward-Garrison <
>>> cwardgar@xxxxxxxx> wrote:
>>>
>>>> Hi Dan,
>>>>
>>>> Have you tried "-regexp" instead of "-regExp"? The CLI parser is
>>>> really picky about case.
>>>>
>>>> Cheers,
>>>> Christian
>>>>
>>>> On Tue, Nov 3, 2015 at 11:20 AM, Dan Swank - NOAA Affiliate <
>>>> dan.swank@xxxxxxxx> wrote:
>>>>
>>>>> I am attempting to use latest
>>>>> md5(c97a881c1a7960df2c366d04e9ea5f1b) tdm-4.6.jar
>>>>>
>>>>> According to :
>>>>>
>>>>> https://www.unidata.ucar.edu/software/thredds/current/tds/reference/collections/TDM.html
>>>>> (gcpass section) The -regExp & -rootDir options should be supported,
>>>>> but this particular
>>>>> .jar seems to only know the older spec method, which I cannot use here.
>>>>>
>>>>> I attempt:
>>>>> $ java -classpath
>>>>> /home/tomcat/dans-tdm-content/content/tdm/tdm-4.6.jar thredds.tdm.GCpass1
>>>>> -regExp "\d{6}/\d{8}/YTU..._KWBN_\d*$" -rootDir
>>>>> '/global/dataset/model/ndfd/' -useCacheDir
>>>>> '/raid/tomcat/tdm45/cache-dev/GribIndex' -isGrib2
>>>>>
>>>>> I get:
>>>>> Exception in thread "main" com.beust.jcommander.ParameterException:
>>>>> Unknown option: -regExp
>>>>> at
>>>>> com.beust.jcommander.JCommander.parseValues(JCommander.java:738)
>>>>> at com.beust.jcommander.JCommander.parse(JCommander.java:281)
>>>>> at com.beust.jcommander.JCommander.parse(JCommander.java:264)
>>>>> at com.beust.jcommander.JCommander.<init>(JCommander.java:209)
>>>>> at thredds.tdm.GCpass1$CommandLine.<init>(GCpass1.java:73)
>>>>> at thredds.tdm.GCpass1.main(GCpass1.java:87)
>>>>>
>>>>>
>>>>> What could be going on? Are my arguments out of order or the
>>>>> documentation not correct
>>>>> for this (latest) version of TDM jar?
>>>>> --
>>>>> Dan Swank
>>>>> NOMADS System Support, STG Inc. - Federal Government Contractor
>>>>> NOAA's National Centers for Environmental Information (NCEI)
>>>>> Data Stewardship Devision (DSD)
>>>>> 151 Patton Ave
>>>>> Asheville, NC 28801
>>>>> dan.swank@xxxxxxxx
>>>>> Phone: 828-271-4007
>>>>> Customer Support: 828-271-4800 or http://www.ncdc.noaa.gov/contact
>>>>>
>>>>> The newly formed NCEI merges the National Climatic Data Center (NCDC),
>>>>> the National Geophysical Data Center (NGDC), and the National
>>>>> Oceanographic
>>>>> Data Center (NODC).
>>>>>
>>>>> Facebook: http://www.facebook.com/NOAANationalClimaticDataCenter
>>>>> Twitter: @NOAANCDC @NOAAOceanData
>>>>>
>>>>> ======================= Disclaimer ===========
>>>>> I am not a Federal Employee.
>>>>> Any opinions expressed in this message are mine personally and
>>>>> do not represent official positions from STG Inc, ERT, NCEI, or NOAA
>>>>> ============================================
>>>>>
>>>>> _______________________________________________
>>>>> thredds mailing list
>>>>> thredds@xxxxxxxxxxxxxxxx
>>>>> For list information or to unsubscribe, visit:
>>>>> http://www.unidata.ucar.edu/mailing_lists/
>>>>>
>>>>
>>>>
>>>
>>>
>>> --
>>>
>>> Dan Swank
>>> NOMADS System Support, STG Inc. - Federal Government Contractor
>>> NOAA's National Centers for Environmental Information (NCEI)
>>> Data Stewardship Devision (DSD)
>>> 151 Patton Ave
>>> Asheville, NC 28801
>>> dan.swank@xxxxxxxx
>>> Phone: 828-271-4007
>>> Customer Support: 828-271-4800 or http://www.ncdc.noaa.gov/contact
>>>
>>> The newly formed NCEI merges the National Climatic Data Center (NCDC),
>>> the National Geophysical Data Center (NGDC), and the National Oceanographic
>>> Data Center (NODC).
>>>
>>> Facebook: http://www.facebook.com/NOAANationalClimaticDataCenter
>>> Twitter: @NOAANCDC @NOAAOceanData
>>>
>>> ======================= Disclaimer ===========
>>> I am not a Federal Employee.
>>> Any opinions expressed in this message are mine personally and
>>> do not represent official positions from STG Inc, ERT, NCEI, or NOAA
>>> ============================================
>>>
>>
>>
>
--
Dan Swank
NOMADS System Support, STG Inc. - Federal Government Contractor
NOAA's National Centers for Environmental Information (NCEI)
Data Stewardship Devision (DSD)
151 Patton Ave
Asheville, NC 28801
dan.swank@xxxxxxxx
Phone: 828-271-4007
Customer Support: 828-271-4800 or http://www.ncdc.noaa.gov/contact
The newly formed NCEI merges the National Climatic Data Center (NCDC), the
National Geophysical Data Center (NGDC), and the National Oceanographic
Data Center (NODC).
Facebook: http://www.facebook.com/NOAANationalClimaticDataCenter Twitter:
@NOAANCDC @NOAAOceanData
======================= Disclaimer ===========
I am not a Federal Employee.
Any opinions expressed in this message are mine personally and
do not represent official positions from STG Inc, ERT, NCEI, or NOAA
============================================
