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[IDV #WRE-134204]: Error reading received from .netCDF file

Hi Ryan-

> Do you think the software , VAPOR, would have similar volume display
> problems due to the missing lat/long points?

I don't know.  The problem on the IDV side is that the missing lat/lon values
make it impossible to efficiently resample the grid for displaying in
alternate projections, doing calculations, etc.  With a dimensionless
vertical coordinate, we need to do a look between the sigma coordinates
and the corresponding lat/lon/alt locations for the display. Since you can't 
reproject data in VAPOR, perhaps it will work.  I'm not sure if they
handle the sigma coordinates.

> Yes, I finished at Kean in 2007.  I won't be able to make it to this
> year's NE Storms Conference.  I will aim to present at next year's AMS
> and NE Storms Conferences, as the research will begin shortly.

Good luck on the research and perhaps I'll see you at AMS next year.

Don Murray

> Unidata IDV Support wrote:
> 
> 
> >Hi Ryan-
> >
> >I've been swamped this week, but am looking into it.  The basic
> >problem is that the 2D slices don't care about missing lat/lon points,
> >but the 3D volumes do.  I'm looking into ways around this.
> >
> >Don
> >
> >> http://raritan.dl.stevens-tech.edu/NYHOPS/nyhops_today.ncml
> >>
> >> By the way, we've met at the Northeastern Storms Conference in
> >> Springfield, MA.
> >
> >I remember - you went to Kean.  Are you going to this year's?  I'll be
> there.
> >
> >Don
> >
> >> Unidata IDV Support wrote:
> >>
> >>
> >> >Hi Ryan-
> >> >
> >> >> Full Name: Ryan Kelly
> >> >> Email Address: address@hidden
> >> >> Organization: Stevens Institute of Technology
> >> >> Package Version: 2.5 build date:2008-05-08 07:05 UTC
> >> >> Operating System: Windows XP
> >> >> Hardware: Java: home: C:\Program Files\IDV_2.5\jre version: 1.5.0_11
> >> j3d:1.3.2 fcs (build12)
> >> >> Description of problem: Hello,
> >> >
> >> >> We have an ocean model which contains 11 sigma levels, curvilinear
> >> grid.  We output in netCDF files, but we are having trouble with
> >> displaying in 3D with IDV.  We are unable to produce volume slices.
> >> IDV has displayed each sigma level as a surface, but no volume can be
> >> generated.
> >> >>
> >> >> This is the message we receive:
> >> >>
> >> >> Couldn't get data
> >> >> Gridded3DSet: samples values may not be missing
> >> >>
> >> >> Any comments or suggestions would be appreciated.
> >> >> Thank You
> >> >
> >> >Can you send us a pointer to the file or put the file on an
> >> >server so we can take a look?
> >> >
> >> >The error indicates that there are missing values in the domain.
> >> >
> >> >Don Murray
> >> >
> >> >> ******************
> >> >> Stack trace:
> >> >> visad.SetException: Gridded3DSet: samples values may not be missing
> >> >> at visad.Gridded3DSet.<init>(Gridded3DSet.java:96)
> >> >> at visad.GriddedSet.create(GriddedSet.java:218)
> >> >> at
> >>
> ucar.unidata.data.grid.GeoGridAdapter.getInitialSpatialDomain(GeoGridAda
> >> pter.java:858)
> >> >> at
> >>
> ucar.unidata.data.grid.GeoGridAdapter.getSpatialDomainSet(GeoGridAdapter
> >> .java:387)
> >> >> at
> >>
> ucar.unidata.data.grid.GeoGridAdapter.getFlatField(GeoGridAdapter.java:1
> >> 105)
> >> >> at
> >>
> ucar.unidata.data.grid.GeoGridAdapter.makeSequence(GeoGridAdapter.java:1
> >> 297)
> >> >> at
> >>
> ucar.unidata.data.grid.GeoGridAdapter.getSequence(GeoGridAdapter.java:10
> >> 47)
> >> >> at
> >>
> ucar.unidata.data.grid.GeoGridDataSource.makeFieldImpl(GeoGridDataSource
> >> .java:1431)
> >> >> at
> >>
> ucar.unidata.data.grid.GeoGridDataSource.getDataInner(GeoGridDataSource.
> >> java:1144)
> >> >> at
> ucar.unidata.data.DataSourceImpl.getData(DataSourceImpl.java:2063)
> >> >> at
> >> ucar.unidata.data.DirectDataChoice.getData(DirectDataChoice.java:333)
> >> >> at
> >> ucar.unidata.data.DerivedDataChoice.setData(DerivedDataChoice.java:610)
> >> >> at
> >>
> ucar.unidata.data.DerivedDataChoice.collectOperands(DerivedDataChoice.ja
> >> va:537)
> >> >> at
> >> ucar.unidata.data.DerivedDataChoice.getData(DerivedDataChoice.java:709)
> >> >> at ucar.unidata.data.DataChoice.getData(DataChoice.java:620)
> >> >> at ucar.unidata.data.DataInstance.getData(DataInstance.java:239)
> >> >> at ucar.unidata.data.DataInstance.getData(DataInstance.java:203)
> >> >> at
> >> ucar.unidata.data.grid.GridDataInstance.init(GridDataInstance.java:204)
> >> >> at
> >>
> ucar.unidata.data.grid.GridDataInstance.<init>(GridDataInstance.java:161
> >> )
> >> >> at
> >>
> ucar.unidata.data.grid.GridDataInstance.<init>(GridDataInstance.java:142
> >> )
> >> >> at
> >>
> ucar.unidata.idv.control.PlanViewControl.doMakeDataInstance(PlanViewCont
> >> rol.java:1172)
> >> >> at
> >>
> ucar.unidata.idv.control.DisplayControlImpl.initializeDataInstance(Displ
> >> ayControlImpl.java:2903)
> >> >> at
> >>
> ucar.unidata.idv.control.DisplayControlImpl.setData(DisplayControlImpl.j
> >> ava:2885)
> >> >> at
> >>
> ucar.unidata.idv.control.PlanViewControl.setData(PlanViewControl.java:48
> >> 9)
> >> >> at
> >>
> ucar.unidata.idv.control.FlowPlanViewControl.setData(FlowPlanViewControl
> >> .java:171)
> >> >> at
> >> ucar.unidata.idv.control.PlanViewControl.init(PlanViewControl.java:398)
> >> >> at
> >>
> ucar.unidata.idv.control.DisplayControlImpl.init(DisplayControlImpl.java
> >> :1257)
> >> >> at
> >>
> ucar.unidata.idv.control.DisplayControlImpl.init(DisplayControlImpl.java
> >> :968)
> >> >> at
> >>
> ucar.unidata.idv.ControlDescriptor.initControl(ControlDescriptor.java:95
> >> 1)
> >> >> at
> ucar.unidata.idv.ControlDescriptor$1.run(ControlDescriptor.java:876)
> >> >> at ucar.unidata.util.Misc$3.run(Misc.java:1018)
> >> >>
> >> >>
> >> >>
> >> >
> >> >
> >> >Ticket Details
> >> >===================
> >> >Ticket ID: WRE-134204
> >> >Department: Support IDV
> >> >Priority: Normal
> >> >Status: Open
> >> >
> >> >
> >>
> >> -------------------------------
> >> Ryan Kelly
> >> Davidson Laboratory
> >> Stevens Institute of Technology
> >> Hoboken, NJ 07030
> >> O:+1(201)-216-5250
> >> C:+1(201)-394-6729
> >>
> >>
> >
> >
> >Ticket Details
> >===================
> >Ticket ID: WRE-134204
> >Department: Support IDV
> >Priority: High
> >Status: Open
> >
> >
> 
> -------------------------------
> Ryan Kelly
> Davidson Laboratory
> Stevens Institute of Technology
> Hoboken, NJ 07030
> O:+1(201)-216-5250
> C:+1(201)-394-6729
> 
> 


Ticket Details
===================
Ticket ID: WRE-134204
Department: Support IDV
Priority: Urgent
Status: Open