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[netCDF #PSS-815442]: error building netcdf 4.3.0 with gfortran 4.7.2

Hans,

> Hereby I send you the requested log files, config.log and  
> fortran/nfconfig.inc.

Oops, I wasn't clear enough.  I need the config.log from running the 
netcdf-fortran-4.2 configure script,
which should be in the top-level of the netcdf-fortran-4.2 directory.

The one you sent was from the netcdf-4.3.0 C library build, which seemed to 
have been successful.

--Russ

> Regards,
> Hans Malschaert
> 
> -----Original Message-----
> From: Unidata netCDF Support [mailto:address@hidden]
> Sent: Wednesday, June 26, 2013 4:44 PM
> To: Hans Malschaert
> Cc: address@hidden
> Subject: [netCDF #PSS-815442]: error building netcdf 4.3.0 with gfortran 4.7.2
> 
> Hans,
> 
> > Thank you for your response. We followed the instructions you described 
> > with as result the same error as mentioned before.
> > I also noticed that I sent you the wrong definitions of the
> > environmental variables but hereby I sent you  in detail the steps we 
> > followed; 1. First the gcc build.
> >
> > cd /opt/netcdf-work/netcdf-4.3.0
> > make distclean
> > ./configure --prefix=/opt/netcdf-4.3.0-gf --disable-netcdf-4
> > --disable-dap make check make install
> >
> > The result is successfull.  The following files are now created;
> >
> > /opt/netcdf-4.3.0-gf/bin:
> > drwxr-xr-x. 2 root root   4096 Jun 26 15:13 .
> > drwxr-xr-x. 6 root root   4096 Jun 26 15:13 ..
> > -rwxr-xr-x. 1 root root   5006 Jun 26 15:13 nc-config
> > -rwxr-xr-x. 1 root root 118026 Jun 26 15:13 nccopy -rwxr-xr-x. 1 root
> > root 221658 Jun 26 15:13 ncdump -rwxr-xr-x. 1 root root 679918 Jun 26
> > 15:13 ncgen -rwxr-xr-x. 1 root root 204029 Jun 26 15:13 ncgen3
> >
> > /opt/netcdf-4.3.0-gf/include:
> > total 68
> > drwxr-xr-x. 2 root root  4096 Jun 26 15:13 .
> > drwxr-xr-x. 6 root root  4096 Jun 26 15:13 ..
> > -rw-r--r--. 1 root root 58489 Jun 26 15:13 netcdf.h
> >
> > /opt/netcdf-4.3.0-gf/lib:
> > total 4732
> > drwxr-xr-x. 3 root root    4096 Jun 26 15:13 .
> > drwxr-xr-x. 6 root root    4096 Jun 26 15:13 ..
> > -rw-r--r--. 1 root root 2799068 Jun 26 15:13 libnetcdf.a
> > -rwxr-xr-x. 1 root root     945 Jun 26 15:13 libnetcdf.la
> > lrwxrwxrwx. 1 root root      18 Jun 26 15:13 libnetcdf.so -> 
> > libnetcdf.so.7.2.0
> > lrwxrwxrwx. 1 root root      18 Jun 26 15:13 libnetcdf.so.7 -> 
> > libnetcdf.so.7.2.0
> > -rwxr-xr-x. 1 root root 2026296 Jun 26 15:13 libnetcdf.so.7.2.0
> > drwxr-xr-x. 2 root root    4096 Jun 26 15:13 pkgconfig
> >
> >
> > 2. The fortran build
> >
> > CPPFLAGS=-I/opt/netcdf-4.3.0-gf/include;export CPPFLAGS
> > LDFLAGS=-L/opt/netcdf-4.3.0-gf/lib;export LDFLAGS export
> > LD_LIBRARY_PATH=/opt/netcdf-4.3.0-gf/lib:${LD_LIBRARY_PATH}
> >
> > cd netcdf-fortran-4.2
> > make distclean
> > ./configure --prefix=/opt/netcdf-4.3.0-gf make check
> >
> > which results in the error :
> > ncfortran.h:24:42: fatal error: NF_INT_IS_C_... not defined: No such
> >
> > We would really appreciate your advice in this case.
> 
> I don't see the cause of the error, so will need more information.  Could you 
> please send the complete config.log file, as well as the file 
> fortran/nfconfig.inc that was generated when the configure script was run?
> 
> Thanks!
> 
> --Russ
> 
> > -----Original Message-----
> > From: Unidata netCDF Support [mailto:address@hidden]
> > Sent: Tuesday, June 25, 2013 9:26 PM
> > To: Hans Malschaert
> > Cc: address@hidden
> > Subject: [netCDF #PSS-815442]: error building netcdf 4.3.0 with
> > gfortran 4.7.2
> >
> > Hi Hans,
> >
> >
> > > We met an error message building netcdf 4.3.0 in a Centos 6.2 environment 
> > > with a gfortran 4.7.2 compiler.
> > >
> > > Could you give some advice to solve the problem?
> >
> > First, you'll have trouble building netCDF 4.3.0 with a Fortran compiler, 
> > as it is only a C library.  You should be building it with gcc rather than 
> > gfortran, for example, according to these instructions:
> >
> > http://www.unidata.ucar.edu/netcdf/docs/building.html
> >
> > Once you have the netCDF C library built and installed, you can get and 
> > build the separate netCDF Fortran 4.2 libraries by following these 
> > instructions:
> >
> > http://www.unidata.ucar.edu/netcdf/docs/netcdf-fortran-install.html
> >
> > --Russ
> >
> > > The environment variables are set as follows ;
> > > LDFLAGS=-L/opt/shared/tools/gcc/4.7.2/rtf/lib
> > > CPPFLAGS=-I/opt/shared/tools/gcc/4.7.2/rtf/include
> > > -I/opt/netcdf-4.3.0-gf/include
> > > LD_LIBRARY_PATH=/opt/shared/tools/gcc/4.7.2/rtf/lib
> > >
> > > ./configure --prefix=/opt/netcdf-4.3.0-gf make check
> > >
> > > which generate the following error..
> > > Making check in fortran
> > > make[1]: Entering directory `/opt/netcdf-4.1.3/fortran'
> > > echo '!     NetCDF-3.' > netcdf.inc
> > > cat ../fortran/netcdf3.inc >> netcdf.inc echo >> netcdf.inc
> > > echo '!     NetCDF-2.' >> netcdf.inc
> > > cat ../fortran/netcdf2.inc >> netcdf.inc make  check-am
> > > make[2]: Entering directory `/opt/netcdf-4.1.3/fortran'
> > > depbase=`echo fort-attio.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
> > > /bin/sh ../libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. 
> > >  -I../include     -g -O2 -MT fort-attio.lo -MD -MP -MF $depbase.Tpo -c -o 
> > > fort-attio.lo fort-attio.c &&\
> > > mv -f $depbase.Tpo $depbase.Plo
> > > libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -I../include -g -O2
> > > -MT fort-attio.lo -MD -MP -MF .deps/fort-attio.Tpo -c fort-attio.c  -fPIC 
> > > -DPIC -o .libs/fort-attio.o In file included from fort-attio.c:8:0:
> > > ncfortran.h:24:42: fatal error: NF_INT_IS_C_... not defined: No such
> > > file or directory compilation terminated.
> > > make[2]: *** [fort-attio.lo] Error 1
> > > make[2]: Leaving directory `/opt/netcdf-4.1.3/fortran'
> > > make[1]: *** [check] Error 2
> > > make[1]: Leaving directory `/opt/netcdf-4.1.3/fortran'
> > > make: *** [check-recursive] Error 1
> > >
> > >
> > > Best regards,
> > > Hans Malschaert
> > > System/Network administrator
> > >
> > > Information and Presentation Centre (IPC) Royal Netherlands
> > > Institute for Sea Research (Koninklijk Nederlands Instituut voor
> > > Zeeonderzoek) Landsdiep 4 -  1797 SZ Den Hoorn  - Netherlands
> > > *  mailto: address@hidden<mailto:address@hidden>
> > > ? tel   : +31 222 369377
> > > ? fax   : +31 222 319674
> > > *   ftp    : http://nioz.wetransfer.com<http://nioz.wetransfer.com/>
> > > *   web : http://www.nioz.nl<http://www.nioz.nl/>
> > > [Description: cid:image001.gif@01CBEAF1.BA49FCA0]
> > >
> > >
> > >
> > Russ Rew                                         UCAR Unidata Program
> > address@hidden                      http://www.unidata.ucar.edu
> >
> >
> >
> > Ticket Details
> > ===================
> > Ticket ID: PSS-815442
> > Department: Support netCDF
> > Priority: Normal
> > Status: Closed
> >
> >
> 
> Russ Rew                                         UCAR Unidata Program
> address@hidden                      http://www.unidata.ucar.edu
> 
> 
> 
> Ticket Details
> ===================
> Ticket ID: PSS-815442
> Department: Support netCDF
> Priority: Normal
> Status: Closed
> 
> 

Russ Rew                                         UCAR Unidata Program
address@hidden                      http://www.unidata.ucar.edu



Ticket Details
===================
Ticket ID: PSS-815442
Department: Support netCDF
Priority: Normal
Status: Closed