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[netCDF #JAF-118152]: error in the path of netcdf in compiling

Hi,

> I downloaded netcdf 4.3.0 .tar.gz and tried to install it in  /home/fedora/sof
> tware/netcdf/netcdf4.3.0.tar.gz  and I entered the same address in  
> ./configure
>  --prefix=/home/fedora/software/netcdf/netcdf4.3.0.tar.gz --disable-netcdf-4 a
> nd then I typed:
> make check install
> 
> but there are some errors that I  don't undrestand:
> 3 of 9 tests failed
> Please report to address@hidden
> ================================================
> make[4]: *** [check-TESTS] Error 1
> make[4]: Leaving directory `/home/fedora/software/netcdf/netcdf-4.3.0/ncdap_t
> est'
> make[3]: *** [check-am] Error 2
> make[3]: Leaving directory `/home/fedora/software/netcdf/netcdf-4.3.0/ncdap_t
> est'
> make[2]: *** [check-recursive] Error 1
> make[2]: Leaving directory `/home/fedora/software/netcdf/netcdf-4.3.0/ncdap_t
> est'
> make[1]: *** [check] Error 2
> make[1]: Leaving directory `/home/fedora/software/netcdf/netcdf-4.3.0/ncdap_t
> est'
> make: *** [check-recursive] Error 1

Unfortunately, those are problems with the configuration of our test
server, which we are in the process of changing.  You could ignore them,
except they prevent your "make check" from completing.

Until we complete our test server reconfiguration (which might not get
done this week), you'll have to use the option
"--disable-dap-remote-tests" when you invoke the configure script.

Sorry about that!

--Russ

> p.s. my fedora release is 15 that I wrongly wrote 14.
> 
> I really appreciate your help.
> best regards,
> Sara
> 
> 
> 
> On Monday, March 3, 2014 3:16 PM, Unidata netCDF Support <support-netcdf@unid
> ata.ucar.edu> wrote:
>  
> Hi Sara,
> 
> > I try to find the path where my netcdf is installed but I can't find it.
> 
> The default location for netCDF installation is /usr/local/lib for the
> libraries. /usr/local/bin for the utility programs, /usr/local/include
> for the header files, and /usr/local/share for the doumentation.
> 
> > my linux fedora 14 is installed on a VMplayer on windows 8.
> > and I downloaded netcdf 4.1.1.
> > 
> > find netcdf
> > No such file or directory
> > which netcdf
> > /usr/no netcdf in (/usr/lib64/ccache:/usr/local/bin:/usr/bin:/bin:/usr/loca
> l/sbin:/usr/sbin:/sbin:/home/fedora/bin)
> > 
> > locte netcdf
> > bash: locte: command not found...
> > 
> > whereis netcdf
> > netcdf:
> > 
> > 
> 
> It doesn't install a directory or file named "netcdf". Instead a number
> of files are installed for libraries, utility programs, header files,
> etc.  For example:
> 
> /usr/local:
>   total used in directory 24 available 125909712
>   drwxr-xr-x 98 russ ustaff 4096 Feb 26 10:56 ../
>   drwxr-xr-x  2 russ ustaff 4096 Nov 29  2010 bin/
>   drwxr-xr-x  2 russ ustaff 4096 Nov 29  2010 include/
>   drwxr-xr-x  3 russ ustaff 4096 Nov 29  2010 lib/
>   drwxr-xr-x  5 russ ustaff 4096 Jul 13  2010 share/
>   drwxr-xr-x  6 russ ustaff 4096 Jul 13  2010 ./
> 
> /usr/local/lib:
>   total used in directory 6928 available 125909712
>   drwxr-xr-x 2 russ ustaff    4096 Nov 29  2010 pkgconfig/
>   drwxr-xr-x 3 russ ustaff    4096 Nov 29  2010 ./
>   -rw-r--r-- 1 root root   1110144 Nov 29  2010 libnetcdf_c++.a
>   -rwxr-xr-x 1 root root      1129 Nov 29  2010 libnetcdf_c++.la*
>   -rw-r--r-- 1 root root   5957490 Nov 29  2010 libnetcdf.a
>   -rwxr-xr-x 1 root root      1075 Nov 29  2010 libnetcdf.la*
>   drwxr-xr-x 6 russ ustaff    4096 Jul 13  2010 ../
> 
> /usr/local/bin:
>   total used in directory 11304 available 125909712
>   drwxr-xr-x 2 russ ustaff    4096 Nov 29  2010 ./
>   -rwxr-xr-x 1 root root      4138 Nov 29  2010 nc-config*
>   -rwxr-xr-x 1 root root   2706061 Nov 29  2010 nccopy*
>   -rwxr-xr-x 1 root root   2867271 Nov 29  2010 ncdump*
>   -rwxr-xr-x 1 root root   3191470 Nov 29  2010 ncgen*
>   -rwxr-xr-x 1 root root   2783769 Nov 29  2010 ncgen3*
>   drwxr-xr-x 6 russ ustaff    4096 Jul 13  2010 ../
> 
> /usr/local/include:
>   total used in directory 468 available 125909712
>   drwxr-xr-x 2 russ ustaff   4096 Nov 29  2010 ./
>   -rw-r--r-- 1 root root    10123 Nov 29  2010 ncvalues.h
>   -rw-r--r-- 1 root root       23 Nov 29  2010 netcdf.hh
>   -rw-r--r-- 1 root root    18918 Nov 29  2010 netcdfcpp.h
>   -rw-r--r-- 1 root root    56774 Nov 29  2010 netcdf.h
>   -rw-r--r-- 1 root root    59387 Nov 29  2010 netcdf.inc
>   -rw-r--r-- 1 root root   308224 Nov 29  2010 netcdf.mod
>   -rw-r--r-- 1 root root     2408 Nov 29  2010 typesizes.mod
>   drwxr-xr-x 6 russ ustaff   4096 Jul 13  2010 ../
> 
> > but when I type:
> > which ncdump
> > /usr/bin/ncdump
> 
> That indicates the installation prefix for you is /usr instead 
> of /usr/local.
> 
> > I need to enter the correct path in gfortran part to compile a testcase and 
> > I
>  think as the path is not correct, this error comes up:
> > 
> > make linux-gfort
> > make coherens "FC=gfortran" "FCOPTS= -O3" "FCDEFS=" "FCDEBUG=" \
> > "CPP=" "CPPF=cpp" "CPPOPTS=-traditional-cpp" "CPPDEFS=-DALLOC -DCDF"
> > make[1]: Entering directory `/home/fedora/models/work'
> > gfortran -I/usr/local/bin/include -O3 -c cf90_routines.f90 -o cf90_routines
> .o
> > COHERENS/code/source/cf90_routines.F90:37.13:
> > 
> > USE netcdf
> > 1
> > Fatal Error: Can't open module file 'netcdf.mod' for reading at (1): No suc
> h file or directory
> > make[1]: *** [cf90_routines.o] Error 1
> > make[1]: Leaving directory `/home/fedora/models/work'
> > make: *** [linux-gfort] Error 2
> > 
> > could you please let me know what causes this error?and how to fix it?
> 
> Instead of "-I/usr/local/bin/include", use "-I/usr/include" in the
> above gfortran command line, and similarly for other cases.
> 
> You might also try the "nf-config" command that is supposed to
> make this simpler:
> 
>   gfortran cf90_routines.f90 -o cf90 `nf-config --fflags --flibs`
> 
> --Russ
> 
> Russ Rew                                         UCAR Unidata Program
> address@hidden                      http://www.unidata.ucar.edu
> 
> 
> 
> Ticket Details
> ===================
> Ticket ID: JAF-118152
> Department: Support netCDF
> Priority: Normal
> Status: Closed
> 
> 
> Ticket Details
> ===================
> Ticket ID: JAF-118152
> Department: Support netCDF
> Priority: Normal
> Status: Open
> Link:  https://www.unidata.ucar.edu/esupport/staff/index.php?_m=tickets&_a=vi
> ewticket&ticketid=23523



Ticket Details
===================
Ticket ID: JAF-118152
Department: Support netCDF
Priority: Normal
Status: Open