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[netCDF #ROO-864724]: installing netCDF for matlab-cdi

Hello,

I'm glad you were able to get your netCDF issue resolved! Unfortunately, we are 
not involved with matlab or CDI/MX.  Your best bet may be to contact the 
maintainer of those packages and see if they can suggest anything.

I'm sorry I can't provide more helpful information, but these errors do not 
mean anything to me, and I am unfamiliar with those packages. I'm sure the 
maintainers will be able to help you.

Have a great day,

-Ward

> actually I think I ve fixed that error but now I have a serious one...
> running the compile.m I get
> 
> Error using mex
> /tmp/mex_2834375024681874_8443/cdi_mx.o: In function `getLevel':
> cdi_mx.c:(.text+0x84d): undefined reference to `Warning'
> /tmp/mex_2834375024681874_8443/cdi_mx.o: In function `readmeta':
> cdi_mx.c:(.text+0x1452): undefined reference to `mxErrMsgIdAndTxt'
> cdi_mx.c:(.text+0x14df): undefined reference to `mxErrMsgIdAndTxt'
> cdi_mx.c:(.text+0x14fd): undefined reference to `gridIsRotated'
> cdi_mx.c:(.text+0x1508): undefined reference to `gridInqXpole'
> cdi_mx.c:(.text+0x152a): undefined reference to `gridInqYpole'
> collect2: error: ld returned 1 exit status
> 
> any feedback highly appreciated
> 
> Thank you
> 
> Thalia
> 
> 
> On 17-May-17 2:52 PM, Thalia Nikolaidou wrote:
> > Dear Sir/Madam
> >
> > I am trying to compile matlab-cdi mex files but I m running to the
> > following error which I cannot solve
> >
> > Error using mex
> > /../../matlab-cdi/cdi_mx.c:10:18: fatal error: grib.h: No such file or
> > directory
> > compilation terminated.
> >
> > I know I dont have the grib.h file in the include folder but I don't
> > know how to create it..
> >
> > I followed the instructions and install the netcdf, cdi  as suggested
> > in the README and ISTALL files of matlab-cdi
> >
> > however I dont have a libnetdcf.a or .so file in my usr/local/include
> > folder
> >
> > Here is what I have:
> >
> > goofy@thalia-ubuntu:/usr/local/lib$ ls -l
> > total 3000
> > -rw-r--r-- 1 root root  1641642 May 17 14:25 libcdi.a
> > -rwxr-xr-x 1 root root      923 May 17 14:25 libcdi.la
> > lrwxrwxrwx 1 root root       15 May 17 14:25 libcdi.so -> libcdi.so.0.0.0
> > lrwxrwxrwx 1 root root       15 May 17 14:25 libcdi.so.0 ->
> > libcdi.so.0.0.0
> > -rwxr-xr-x 1 root root  1147184 May 17 14:25 libcdi.so.0.0.0
> > -rw-r--r-- 1 root root   146542 May 16 21:14 libz.a
> > lrwxrwxrwx 1 root root       13 May 16 21:14 libz.so -> libz.so.1.2.8
> > lrwxrwxrwx 1 root root       13 May 16 21:14 libz.so.1 -> libz.so.1.2.8
> > -rwxr-xr-x 1 root root   113408 May 16 21:14 libz.so.1.2.8
> > drwxr-xr-x 2 root root     4096 May 17 14:25 pkgconfig
> > drwxrwsr-x 4 root staff    4096 Apr 25 10:57 python2.7
> > drwxrwsr-x 3 root staff    4096 Apr 25 10:12 python3.5
> >
> > goofy@thalia-ubuntu:/usr/local/include$ ls -l
> > total 256
> > -rw-r--r-- 1 root root  53164 May 17 14:25 cdi.h
> > -rw-r--r-- 1 root root 101320 May 17 14:25 cdi.inc
> > -rw-r--r-- 1 root root  15472 May 16 21:14 zconf.h
> > -rw-r--r-- 1 root root  87883 May 16 21:14 zlib.h
> >
> >
> > and here is my script for installing the netcdf (from a script I found
> > online, modified)
> >
> > # Install Netcdf
> > v=4.4.1.1
> > wget ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-${v}.tar.gz
> > tar -xf netcdf-${v}.tar.gz && cd netcdf-${v}
> > prefix="/usr/local/"
> > if [ $NETCDF4_DIR != $prefix ]; then
> >     echo "Add NETCDF4_DIR=$prefix to .bashrc"
> >     echo "" >> $BASHRC
> >     echo "# NETCDF4 libraries for python" >> $BASHRC
> >     echo export NETCDF4_DIR=$prefix  >> $BASHRC
> > fi
> > CPPFLAGS=-I$HDF5_DIR/include LDFLAGS=-L$HDF5_DIR/lib ./configure
> > CFLAGS=-fPIC CPPFLAGS=-fPIC --enable-shared --enable-netcdf-4
> > --enable-dap --prefix=$NETCDF4_DIR
> > # make check
> > make
> > sudo make install
> > cd ..
> >
> >
> > I appreciate any help,
> > Thanks a lot
> > Thalia
> >
> 
> --
> ----------------------------
> Department of Geodesy and Geomatics Engineering
> University of New Brunswick
> P.O. Box 4400
> Fredericton, NB
> CANADA E3B 5A3
> 
> 


Ticket Details
===================
Ticket ID: ROO-864724
Department: Support netCDF
Priority: Normal
Status: Closed
===================
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