Re: 20050414: IDV - Error reading GRIB file

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To: Dave Santek <dave.santek@xxxxxxxxxxxxx>
Subject: Re: 20050414: IDV - Error reading GRIB file
From: Robb Kambic <rkambic@xxxxxxxxxxxxxxxx>
Date: Thu, 12 May 2005 11:10:24 -0600 (MDT)
On Thu, 12 May 2005, Dave Santek wrote:

> The gribsimp program is part of the MEL package:
>
> https://mel.dmso.mil/mel_tools/grib.jsp
>

thanks for the info.


> I wonder if using 'cat' to glue them together is the problem. Do you
> know which grid is bad [or the one before?]. I think the 43rd grid is a
> 400mb temperature....
>

i don't thing so at looking at the index file. i'll attach the index file,
the 4th column is the parm #, next level indication, level, etc. i'll also
send a file explaning the index itself.

robb...


> dave
>
> Robb Kambic wrote:
>
> > On Tue, 10 May 2005, Dave Santek wrote:
> >
> >
> >>Hi Robb,
> >>
> >>Don got back to me with this:
> >>
> >>"Thanks for the report. We'll look into this and get back to you.
> >>It's great to have users fully exercise the GRIB stuff in ways that
> >>we don't normally do this. "
> >>
> >>but, I haven't heard from him since [at least I don't have a record of it].
> >>
> >>I put the file back at:
> >>
> >>ftp://ftp.ssec.wisc.edu/pub/incoming/grib.test
> >>
> >
> >
> > i got the file and ran some test on it. the problem was record 43 was
> > somewhat corrupt, length was wrong in the PDS section of the file. this
> > cause my code to barf, so i added a check for the length of the PDS
> > section and to skip that record if it didn't match amount of data read.
> > next release you should be able to read these type of files.
> >
> >
> > could you point me to the utility that you used to split the file into
> > individual records? is this utility widely used?
> >
> > robb...
> >
> >
> >
> >
> >
> >
> >>it will only stay there for a week....
> >>
> >>Thanx!
> >>dave
> >>
> >>Robb Kambic wrote:
> >>
> >>
> >>>dave,
> >>>
> >>>did you every get back a response to your question?  i was cleaning out my
> >>>mail box and i saw you message.  also, i tried to download you grib.test
> >>>file but could not locate it.
> >>>
> >>>robb...
> >>>
> >>>
> >>>
> >>>
> >>>On Thu, 14 Apr 2005, Unidata Support wrote:
> >>>
> >>>
> >>>
> >>>>>To: support-idv@xxxxxxxxxxxxxxxx
> >>>>>From: "Dave Santek" <daves@xxxxxxxxxxxxx>
> >>>>>Subject: IDV - Error reading GRIB file
> >>>>>Organization: SSEC
> >>>>>Keywords: 200504140356.j3E3ujJ9004059
> >>>>
> >>>>Institution: SSEC
> >>>>Package Version: 1.2b2
> >>>>Operating System: os.name:Windows XP; os.arch:x86; os.version:5.1;
> >>>>Hardware Information: java.vendor:Sun Microsystems Inc.; 
> >>>>java.version:1.4.2_01; java.home:C:\\Program Files\\IDV_1.2a2\\jre;
> >>>>Inquiry: Hi,
> >>>>
> >>>>I pasted in the entire error message below. I'm trying to read a GRIB 
> >>>>file that contains
> >>>>300 grids from 2 or 3 forecasts times. I created this file by using 
> >>>>gribsimp to break a
> >>>>GRIB file into separate files, then using 'cat' to concatenate the ones I 
> >>>>want into a
> >>>>single file. I was able to do this with some other files that contained 
> >>>>only one
> >>>>forecast time [although it was output from a different model]. But, now I 
> >>>>want to
> >>>>get a time sequence together. Is it the multiple times causing the 
> >>>>problem?
> >>>>
> >>>>If you're interested in looking at the GRIB file, it's at:
> >>>>
> >>>>ftp://ftp.ssec.wisc.edu/pub/incoming/grib.test
> >>>>
> >>>>Thanks!
> >>>>dave
> >>>>
> >>>>An error has occurred:
> >>>>There was an error loading the data:
> >>>>
> >>>>java.lang.NegativeArraySizeException
> >>>>  at 
> >>>> ucar.grib.grib1.Grib1GridDefinitionSection.<init>(Grib1GridDefinitionSection.java:160)
> >>>>  at ucar.grib.grib1.Grib1Input.scan(Grib1Input.java:92)
> >>>>  at ucar.grib.grib1.Grib1Indexer.writeFileIndex(Grib1Indexer.java:74)
> >>>>  at 
> >>>> ucar.nc2.iosp.grib.GribServiceProvider.writeIndex(GribServiceProvider.java:91)
> >>>>  at 
> >>>> ucar.nc2.iosp.grib.GribServiceProvider.getIndex(GribServiceProvider.java:68)
> >>>>  at 
> >>>> ucar.nc2.iosp.grib.Grib1ServiceProvider.open(Grib1ServiceProvider.java:69)
> >>>>  at ucar.nc2.NetcdfFile.<init>(NetcdfFile.java:640)
> >>>>  at ucar.nc2.NetcdfFile.open(NetcdfFile.java:258)
> >>>>  at ucar.nc2.NetcdfFile.open(NetcdfFile.java:207)
> >>>>  at ucar.nc2.dataset.NetcdfDataset.openFile(NetcdfDataset.java:227)
> >>>>  at ucar.nc2.dataset.NetcdfDataset.openDataset(NetcdfDataset.java:125)
> >>>>  at ucar.nc2.dataset.grid.GridDataset.open(GridDataset.java:65)
> >>>>  at ucar.nc2.dataset.grid.GridDataset.factory(GridDataset.java:74)
> >>>>  at 
> >>>> ucar.unidata.data.grid.GeoGridDataSource.doMakeDataSet(GeoGridDataSource.java:266)
> >>>>  at 
> >>>> ucar.unidata.data.grid.GeoGridDataSource.getDataset(GeoGridDataSource.java:283)
> >>>>  at 
> >>>> ucar.unidata.data.grid.GeoGridDataSource.doMakeDataChoices(GeoGridDataSource.java:297)
> >>>>  at 
> >>>> ucar.unidata.data.DataSourceImpl.getDataChoices(DataSourceImpl.java:958)
> >>>>  at ucar.unidata.data.DataManager.createDataSource(DataManager.java:842)
> >>>>  at 
> >>>> ucar.unidata.idv.IntegratedDataViewer.createDataSource(IntegratedDataViewer.java:1270)
> >>>>  at 
> >>>> ucar.unidata.idv.IntegratedDataViewer.makeDataSource(IntegratedDataViewer.java:1208)
> >>>>  at 
> >>>> ucar.unidata.idv.IntegratedDataViewer.makeDataSource(IntegratedDataViewer.java:1189)
> >>>>  at 
> >>>> ucar.unidata.idv.chooser.IdvChooser.makeDataSource(IdvChooser.java:334)
> >>>>  at 
> >>>> ucar.unidata.idv.chooser.FileChooser.selectFileInner(FileChooser.java:382)
> >>>>  at ucar.unidata.idv.chooser.FileChooser.selectFile(FileChooser.java:262)
> >>>>  at ucar.unidata.idv.chooser.FileChooser.doLoad(FileChooser.java:278)
> >>>>  at ucar.unidata.ui.ChooserPanel.actionPerformed(ChooserPanel.java:130)
> >>>>  at javax.swing.AbstractButton.fireActionPerformed(Unknown Source)
> >>>>  at 
> >>>> javax.swing.AbstractButton$ForwardActionEvents.actionPerformed(Unknown 
> >>>> Source)
> >>>>  at javax.swing.DefaultButtonModel.fireActionPerformed(Unknown Source)
> >>>>  at javax.swing.DefaultButtonModel.setPressed(Unknown Source)
> >>>>  at javax.swing.plaf.basic.BasicButtonListener.mouseReleased(Unknown 
> >>>> Source)
> >>>>  at java.awt.AWTEventMulticaster.mouseReleased(Unknown Source)
> >>>>  at java.awt.Component.processMouseEvent(Unknown Source)
> >>>>  at java.awt.Component.processEvent(Unknown Source)
> >>>>  at java.awt.Container.processEvent(Unknown Source)
> >>>>  at java.awt.Component.dispatchEventImpl(Unknown Source)
> >>>>  at java.awt.Container.dispatchEventImpl(Unknown Source)
> >>>>  at java.awt.Component.dispatchEvent(Unknown Source)
> >>>>  at java.awt.LightweightDispatcher.retargetMouseEvent(Unknown Source)
> >>>>  at java.awt.LightweightDispatcher.processMouseEvent(Unknown Source)
> >>>>  at java.awt.LightweightDispatcher.dispatchEvent(Unknown Source)
> >>>>  at java.awt.Container.dispatchEventImpl(Unknown Source)
> >>>>  at java.awt.Window.dispatchEventImpl(Unknown Source)
> >>>>  at java.awt.Component.dispatchEvent(Unknown Source)
> >>>>  at java.awt.EventQueue.dispatchEvent(Unknown Source)
> >>>>  at java.awt.EventDispatchThread.pumpOneEventForHierarchy(Unknown Source)
> >>>>  at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)
> >>>>  at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
> >>>>  at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
> >>>>  at java.awt.EventDispatchThread.run(Unknown Source)
> >>>>
> >>>>
> >>>>******************
> >>>>Stack trace:
> >>>>java.lang.NegativeArraySizeException
> >>>>  at 
> >>>> ucar.grib.grib1.Grib1GridDefinitionSection.<init>(Grib1GridDefinitionSection.java:160)
> >>>>  at ucar.grib.grib1.Grib1Input.scan(Grib1Input.java:92)
> >>>>  at ucar.grib.grib1.Grib1Indexer.writeFileIndex(Grib1Indexer.java:74)
> >>>>  at 
> >>>> ucar.nc2.iosp.grib.GribServiceProvider.writeIndex(GribServiceProvider.java:91)
> >>>>  at 
> >>>> ucar.nc2.iosp.grib.GribServiceProvider.getIndex(GribServiceProvider.java:68)
> >>>>  at 
> >>>> ucar.nc2.iosp.grib.Grib1ServiceProvider.open(Grib1ServiceProvider.java:69)
> >>>>  at ucar.nc2.NetcdfFile.<init>(NetcdfFile.java:640)
> >>>>  at ucar.nc2.NetcdfFile.open(NetcdfFile.java:258)
> >>>>  at ucar.nc2.NetcdfFile.open(NetcdfFile.java:207)
> >>>>  at ucar.nc2.dataset.NetcdfDataset.openFile(NetcdfDataset.java:227)
> >>>>  at ucar.nc2.dataset.NetcdfDataset.openDataset(NetcdfDataset.java:125)
> >>>>  at ucar.nc2.dataset.grid.GridDataset.open(GridDataset.java:65)
> >>>>  at ucar.nc2.dataset.grid.GridDataset.factory(GridDataset.java:74)
> >>>>  at 
> >>>> ucar.unidata.data.grid.GeoGridDataSource.doMakeDataSet(GeoGridDataSource.java:266)
> >>>>  at 
> >>>> ucar.unidata.data.grid.GeoGridDataSource.getDataset(GeoGridDataSource.java:283)
> >>>>  at 
> >>>> ucar.unidata.data.grid.GeoGridDataSource.doMakeDataChoices(GeoGridDataSource.java:297)
> >>>>  at 
> >>>> ucar.unidata.data.DataSourceImpl.getDataChoices(DataSourceImpl.java:958)
> >>>>  at ucar.unidata.data.DataManager.createDataSource(DataManager.java:842)
> >>>>  at 
> >>>> ucar.unidata.idv.IntegratedDataViewer.createDataSource(IntegratedDataViewer.java:1270)
> >>>>  at 
> >>>> ucar.unidata.idv.IntegratedDataViewer.makeDataSource(IntegratedDataViewer.java:1208)
> >>>>  at 
> >>>> ucar.unidata.idv.IntegratedDataViewer.makeDataSource(IntegratedDataViewer.java:1189)
> >>>>  at 
> >>>> ucar.unidata.idv.chooser.IdvChooser.makeDataSource(IdvChooser.java:334)
> >>>>  at 
> >>>> ucar.unidata.idv.chooser.FileChooser.selectFileInner(FileChooser.java:382)
> >>>>  at ucar.unidata.idv.chooser.FileChooser.selectFile(FileChooser.java:262)
> >>>>  at ucar.unidata.idv.chooser.FileChooser.doLoad(FileChooser.java:278)
> >>>>  at ucar.unidata.ui.ChooserPanel.actionPerformed(ChooserPanel.java:130)
> >>>>  at javax.swing.AbstractButton.fireActionPerformed(Unknown Source)
> >>>>  at 
> >>>> javax.swing.AbstractButton$ForwardActionEvents.actionPerformed(Unknown 
> >>>> Source)
> >>>>  at javax.swing.DefaultButtonModel.fireActionPerformed(Unknown Source)
> >>>>  at javax.swing.DefaultButtonModel.setPressed(Unknown Source)
> >>>>  at javax.swing.plaf.basic.BasicButtonListener.mouseReleased(Unknown 
> >>>> Source)
> >>>>  at java.awt.AWTEventMulticaster.mouseReleased(Unknown Source)
> >>>>  at java.awt.Component.processMouseEvent(Unknown Source)
> >>>>  at java.awt.Component.processEvent(Unknown Source)
> >>>>  at java.awt.Container.processEvent(Unknown Source)
> >>>>  at java.awt.Component.dispatchEventImpl(Unknown Source)
> >>>>  at java.awt.Container.dispatchEventImpl(Unknown Source)
> >>>>  at java.awt.Component.dispatchEvent(Unknown Source)
> >>>>  at java.awt.LightweightDispatcher.retargetMouseEvent(Unknown Source)
> >>>>  at java.awt.LightweightDispatcher.processMouseEvent(Unknown Source)
> >>>>  at java.awt.LightweightDispatcher.dispatchEvent(Unknown Source)
> >>>>  at java.awt.Container.dispatchEventImpl(Unknown Source)
> >>>>  at java.awt.Window.dispatchEventImpl(Unknown Source)
> >>>>  at java.awt.Component.dispatchEvent(Unknown Source)
> >>>>  at java.awt.EventQueue.dispatchEvent(Unknown Source)
> >>>>  at java.awt.EventDispatchThread.pumpOneEventForHierarchy(Unknown Source)
> >>>>  at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)
> >>>>  at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
> >>>>  at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
> >>>>  at java.awt.EventDispatchThread.run(Unknown Source)
> >>>>
> >>>>
> >>>>
> >>>>NOTE: All email exchanges with Unidata User Support are recorded in the
> >>>>Unidata inquiry tracking system and then made publicly available
> >>>>through the web.  If you do not want to have your interactions made
> >>>>available in this way, you must let us know in each email you send to us.
> >>>>

==============================================================================
Robb Kambic                                Unidata Program Center
Software Engineer III                      Univ. Corp for Atmospheric Research
rkambic@xxxxxxxxxxxxxxxx                   WWW: http://www.unidata.ucar.edu/
==============================================================================
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