Ahhh! Very good. Should have known to try the simple solution first.
When trying this file with your recommendation but using v4.3, I'm getting
the following error:
[manross@albion HRRR]$ java -Xmx512m -classpath
/mnt/home/manross/Programming/Java/toolsUI-4.3.jar
ucar.nc2.dataset.NetcdfDataset -in hrrr_20111212-1200F0000.grib2 -out
out_43.nc -isLargeFile
Exception in thread "main" java.io.IOException:
java.lang.StringIndexOutOfBoundsException: String index out of range: -1
at
ucar.nc2.grib.grib2.Grib2CollectionBuilder.<init>(Grib2CollectionBuilder.java:107)
at
ucar.nc2.grib.grib2.Grib2CollectionBuilder.createFromSingleFile(Grib2CollectionBuilder.java:64)
at ucar.nc2.grib.GribIndex.makeCollection(GribIndex.java:77)
at ucar.nc2.grib.grib2.Grib2Iosp.open(Grib2Iosp.java:225)
at ucar.nc2.NetcdfFile.<init>(NetcdfFile.java:1458)
at ucar.nc2.NetcdfFile.open(NetcdfFile.java:860)
at ucar.nc2.NetcdfFile.open(NetcdfFile.java:497)
at ucar.nc2.dataset.NetcdfDataset.openOrAcquireFile(NetcdfDataset.java:694)
at ucar.nc2.dataset.NetcdfDataset.openFile(NetcdfDataset.java:566)
at ucar.nc2.dataset.NetcdfDataset.main(NetcdfDataset.java:1678)
Caused by: java.lang.StringIndexOutOfBoundsException: String index out of
range: -1
at java.lang.String.substring(String.java:1937)
at
thredds.inventory.CollectionSpecParser.<init>(CollectionSpecParser.java:93)
at
thredds.inventory.DatasetCollectionMFiles.<init>(DatasetCollectionMFiles.java:112)
at
thredds.inventory.DatasetCollectionMFiles.open(DatasetCollectionMFiles.java:85)
at
ucar.nc2.grib.grib2.Grib2CollectionBuilder.<init>(Grib2CollectionBuilder.java:99)
... 9 more
-kevin.
On Mon, Dec 12, 2011 at 12:57 PM, John Caron <caron@xxxxxxxxxxxxxxxx> wrote:
> Hi Kevin:
>
> 1) in general, use
>
> java -Xmx512m -classpath netdfAll-<version>.jar
> ucar.nc2.dataset.NetcdfDataset -in <fileIn> -out <fileOut> [-isLargeFile]
>
> see:
>
>
> http://www.unidata.ucar.edu/software/netcdf-java/reference/Cookbook.html#writeClasssic
>
> 2) it appears you are exceeding the 2G limit, so be sure to use
> -isLargeFile flag
>
> 3) check to see if the variables are correct, since the tables may need
> updating. Let me know if you see any problems
>
>
>
> John
>
> On 12/12/2011 10:44 AM, Kevin Manross wrote:
>
>
> Greetings!
>
> I have been using the utility ucar.nc2.iosp.grib.Grib2Netcdf in
> toolsUI-4.1 successfully to convert High Resolution Rapid Refresh (HRRR)
> GRIB2 files to netcdf-3.
>
> When trying to use this utility in toolsUI-4.2, I am unable to write out
> the file:
>
> [manross@albion HRRR]$ java -Xmx512m -classpath
> /mnt/home/manross/Programming/Java/toolsUI-4.2.jar
> ucar.nc2.iosp.grib.Grib2Netcdf hrrr_20111212-1200F0000.grib2 out_42.nc
> Mon Dec 12 17:20:44 GMT 2011 ... Start of Grib2Netcdf
> read grib file=hrrr_20111212-1200F0000.grib2 write to netCDF file=
> out_42.nc
> Dec 12, 2011 5:20:44 PM ucar.nc2.iosp.grid.GridVariable makeVariable
> WARNING: Duplicate record for hrrr_20111212-1200F0000.grib2
> GribGridRecord{param=Total_precipitation, levelType1=1, levelValue1=0.0,
> forecastTime=0, pdsOffset=369269359}
> GribGridRecord{param=Total_precipitation, levelType1=1, levelValue1=0.0,
> forecastTime=0, pdsOffset=369268399}
> Dec 12, 2011 5:20:44 PM ucar.nc2.iosp.grid.GridVariable makeVariable
> WARNING: Duplicate record for hrrr_20111212-1200F0000.grib2
> GribGridRecord{param=Water_equivalent_of_accumulated_snow_depth,
> levelType1=1, levelValue1=0.0, forecastTime=0, pdsOffset=369270079}
> GribGridRecord{param=Water_equivalent_of_accumulated_snow_depth,
> levelType1=1, levelValue1=0.0, forecastTime=0, pdsOffset=369269119}
> Dec 12, 2011 5:20:44 PM ucar.nc2.iosp.grid.GridVariable makeVariable
> WARNING: Duplicate record for hrrr_20111212-1200F0000.grib2
> GribGridRecord{param=Convective_precipitation, levelType1=1,
> levelValue1=0.0, forecastTime=0, pdsOffset=369269599}
> GribGridRecord{param=Convective_precipitation, levelType1=1,
> levelValue1=0.0, forecastTime=0, pdsOffset=369268639}
> Dec 12, 2011 5:20:44 PM ucar.nc2.iosp.grid.GridVariable makeVariable
> WARNING: Duplicate record for hrrr_20111212-1200F0000.grib2
> GribGridRecord{param=Large_scale_precipitation_non-convective,
> levelType1=1, levelValue1=0.0, forecastTime=0, pdsOffset=369269839}
> GribGridRecord{param=Large_scale_precipitation_non-convective,
> levelType1=1, levelValue1=0.0, forecastTime=0, pdsOffset=369268879}
> Exception in thread "main" java.lang.IllegalArgumentException: Variable
> starting pos=2164328984 may not exceed 2147483647
> at ucar.nc2.iosp.netcdf3.N3header.writeHeader(N3header.java:671)
> at ucar.nc2.iosp.netcdf3.N3header.create(N3header.java:602)
> at ucar.nc2.iosp.netcdf3.N3iosp.create(N3iosp.java:641)
> at ucar.nc2.NetcdfFileWriteable.create(NetcdfFileWriteable.java:605)
> at ucar.nc2.FileWriter.writeToFile(FileWriter.java:225)
> at ucar.nc2.FileWriter.writeToFile(FileWriter.java:96)
> at ucar.nc2.iosp.grib.Grib2Netcdf.main(Grib2Netcdf.java:125)
>
>
> Unfortunately, I can't even find the Grib2Netcdf utility in toolsUI-4.3.
>
> Is this utility no longer available or supported? Is there anything
> like it in 4.3? If not, is there a chance that I could get this fixed in
> v4.2?
>
> I'd be happy to supply the GRIB2 file if people want to test this.
>
> Many thanks!!
>
> -kevin.
>
>
> --
>
> +-----------------------------------------------------+
> Kevin L. Manross | ** New Address **
> CIMMS Research Associate | 120 David L. Boren Bvd
> NSSL : WRDD : SWAT | Rm 3923<kevin.manross@xxxxxxxx>
> <https://hedwig.nssl.noaa.gov/frame.html?&security=false&lang=en> |
> 405.325.6385www.cimms.ou.edu/~kmanross <http://www.cimms.ou.edu/%7Ekmanross> |
> "My opinions are my own and not representative of
> CIMMS, NSSL, NOAA or any affiliates"
> +-----------------------------------------------------+
>
>
>
>
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