Hi Momme,
On Jun 29, 2008, at 1:00 PM, netcdfgroup-request@xxxxxxxxxxxxxxxx wrote:
Date: Sun, 29 Jun 2008 16:20:55 +0100
From: Momme Butensch?n <mommebu@xxxxxxxx>
Subject: [netcdfgroup] problems with compilation: H5DS routines
undefined
To: netcdfgroup@xxxxxxxxxxxxxxxx
Message-ID: <4867A857.4020306@xxxxxxxx>
Content-Type: text/plain; charset=ISO-8859-1; format=flowed
When compiling a program linking with netcdf4, hdf5 I get the
following
error:
ifort -r8 -O2 -o ../../../bin/opa model.o ../../../lib/oce/libopa.a
.../../../lib/libioipsl.a -L/opt/netCDF-4/lib -lnetcdff -lnetcdf
-L/opt/hdf5/lib -lhdf5
/opt/netCDF-4/lib/libnetcdf.so: undefined reference to
`H5DSget_num_scales'
/opt/netCDF-4/lib/libnetcdf.so: undefined reference to `H5DSset_scale'
/opt/netCDF-4/lib/libnetcdf.so: undefined reference to `H5DSis_scale'
/opt/netCDF-4/lib/libnetcdf.so: undefined reference to
`H5DSiterate_scales'
/opt/netCDF-4/lib/libnetcdf.so: undefined reference to
`H5DSget_scale_name'
/opt/netCDF-4/lib/libnetcdf.so: undefined reference to
`H5DSattach_scale'
/opt/netCDF-4/lib/libnetcdf.so: undefined reference to
`H5DSdetach_scale'
gmake[1]: *** [../../../bin/opa] Error 1
nm of libnetcdf.a and libnetcdf.so gives
U H5DSget_num_scales
Any ideas what's going wrong?
Hmm, are you compiling against an older version of the HDF5 library
(i.e. not the 1.8.1 or later that the netCDF-4 release wants), or one
that was built with the "--disable-hl" configure flag?
Quincey
