Hello all netCDFgroup,
I 'm trying to install the soft Magics++-2.6.4 in my Ubuntu 9.04 PC.
I have been follow the manual "Magics++ Installation Guide", and I have
netcdf-4.0.1, hdf5 and hdf5_hl successfully installed in my PC (I guess).
When I try to configure the Magics++ I used these compiler flags:
$ *sudo ./configure --prefix=/usr/local/magic3 --enable-32bit
--enable-raster --with-grib-api=/usr/local --with-netcdf=/usr/local/netcdf3
--enable-static*
...and I have the next error:
*“checking for ncvarid in -lnetcdf... no
configure: error: netcdf library not found. *” BUT I HAVE IT!! in
/usr/local/netcdf3
I have been trying with other flags always obtain the same error.
Someone knows what is the problem???
In the attach files I send the config.log from Magicss++, netcdf and HDF5
instalation.
I hope you can help me!
Thanks in advance!
Javier.
*Aditional information:*
When I compiled the netcdf, I included the hdf5 library in the compiler
flags:
*NETCDF Flags:*
*$ sudo ./configure --prefix=/usr/local/netcdf3 --enable-netcdf-4
--with-hdf5=/usr/local/hdf5_20 --with-zlib=/usr/local --enable-dap
--with-curl=/usr/local
*
*HDF5 Flags:*
*sudo ./configure --prefix=/usr/local/hdf5_20 --with-zlib=/usr/local*
Thanks!
Javier.
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by configure, which was
generated by GNU Autoconf 2.61. Invocation command line was
$ ./configure --prefix=/usr/local/magics3 --enable-32bit --enable-raster
--with-grib-api=/usr/local --with-netcdf=/usr/local/netcdf3 --enable-static
## --------- ##
## Platform. ##
## --------- ##
hostname = javier-laptop
uname -m = i686
uname -r = 2.6.28-14-generic
uname -s = Linux
uname -v = #47-Ubuntu SMP Sat Jul 25 00:28:35 UTC 2009
/usr/bin/uname -p = unknown
/bin/uname -X = unknown
/bin/arch = unknown
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = unknown
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /usr/local/sbin
PATH: /usr/local/bin
PATH: /usr/sbin
PATH: /usr/bin
PATH: /sbin
PATH: /bin
PATH: /usr/X11R6/bin
## ----------- ##
## Core tests. ##
## ----------- ##
configure:2140: checking for a BSD-compatible install
configure:2196: result: /usr/bin/install -c
configure:2207: checking whether build environment is sane
configure:2250: result: yes
configure:2315: checking for gawk
configure:2345: result: no
configure:2315: checking for mawk
configure:2331: found /usr/bin/mawk
configure:2342: result: mawk
configure:2353: checking whether make sets $(MAKE)
configure:2374: result: yes
configure:2604: checking for xlc_r
configure:2634: result: no
configure:2604: checking for icc
configure:2634: result: no
configure:2604: checking for aCC
configure:2634: result: no
configure:2604: checking for gcc
configure:2620: found /usr/bin/gcc
configure:2631: result: gcc
configure:2667: checking for C compiler version
configure:2674: gcc --version >&5
gcc (Ubuntu 4.3.3-5ubuntu4) 4.3.3
Copyright (C) 2008 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:2677: $? = 0
configure:2684: gcc -v >&5
Using built-in specs.
Target: i486-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 4.3.3-5ubuntu4'
--with-bugurl=file:///usr/share/doc/gcc-4.3/README.Bugs
--enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --enable-shared
--with-system-zlib --libexecdir=/usr/lib --without-included-gettext
--enable-threads=posix --enable-nls --with-gxx-include-dir=/usr/include/c++/4.3
--program-suffix=-4.3 --enable-clocale=gnu --enable-libstdcxx-debug
--enable-objc-gc --enable-mpfr --enable-targets=all --with-tune=generic
--enable-checking=release --build=i486-linux-gnu --host=i486-linux-gnu
--target=i486-linux-gnu
Thread model: posix
gcc version 4.3.3 (Ubuntu 4.3.3-5ubuntu4)
configure:2687: $? = 0
configure:2694: gcc -V >&5
gcc: '-V' option must have argument
configure:2697: $? = 1
configure:2720: checking for C compiler default output file name
configure:2747: gcc conftest.c >&5
configure:2750: $? = 0
configure:2788: result: a.out
configure:2805: checking whether the C compiler works
configure:2815: ./a.out
configure:2818: $? = 0
configure:2835: result: yes
configure:2842: checking whether we are cross compiling
configure:2844: result: no
configure:2847: checking for suffix of executables
configure:2854: gcc -o conftest conftest.c >&5
configure:2857: $? = 0
configure:2881: result:
configure:2887: checking for suffix of object files
configure:2913: gcc -c conftest.c >&5
configure:2916: $? = 0
configure:2939: result: o
configure:2943: checking whether we are using the GNU C compiler
configure:2972: gcc -c conftest.c >&5
configure:2978: $? = 0
configure:2995: result: yes
configure:3000: checking whether gcc accepts -g
configure:3030: gcc -c -g conftest.c >&5
configure:3036: $? = 0
configure:3135: result: yes
configure:3152: checking for gcc option to accept ISO C89
configure:3226: gcc -c -g -O2 conftest.c >&5
configure:3232: $? = 0
configure:3255: result: none needed
configure:3284: checking for style of include used by make
configure:3312: result: GNU
configure:3340: checking dependency style of gcc
configure:3430: result: gcc3
configure:3505: checking for xlC_r
configure:3535: result: no
configure:3505: checking for icpc
configure:3535: result: no
configure:3505: checking for aC++
configure:3535: result: no
configure:3505: checking for g++
configure:3521: found /usr/bin/g++
configure:3532: result: g++
configure:3563: checking for C++ compiler version
configure:3570: g++ --version >&5
g++ (Ubuntu 4.3.3-5ubuntu4) 4.3.3
Copyright (C) 2008 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:3573: $? = 0
configure:3580: g++ -v >&5
Using built-in specs.
Target: i486-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 4.3.3-5ubuntu4'
--with-bugurl=file:///usr/share/doc/gcc-4.3/README.Bugs
--enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --enable-shared
--with-system-zlib --libexecdir=/usr/lib --without-included-gettext
--enable-threads=posix --enable-nls --with-gxx-include-dir=/usr/include/c++/4.3
--program-suffix=-4.3 --enable-clocale=gnu --enable-libstdcxx-debug
--enable-objc-gc --enable-mpfr --enable-targets=all --with-tune=generic
--enable-checking=release --build=i486-linux-gnu --host=i486-linux-gnu
--target=i486-linux-gnu
Thread model: posix
gcc version 4.3.3 (Ubuntu 4.3.3-5ubuntu4)
configure:3583: $? = 0
configure:3590: g++ -V >&5
g++: '-V' option must have argument
configure:3593: $? = 1
configure:3596: checking whether we are using the GNU C++ compiler
configure:3625: g++ -c conftest.cpp >&5
configure:3631: $? = 0
configure:3648: result: yes
configure:3653: checking whether g++ accepts -g
configure:3683: g++ -c -g conftest.cpp >&5
configure:3689: $? = 0
configure:3788: result: yes
configure:3813: checking dependency style of g++
configure:3903: result: gcc3
configure:3973: checking for f90
configure:4003: result: no
configure:3973: checking for gfortran
configure:3989: found /usr/bin/gfortran
configure:4000: result: gfortran
configure:4030: checking for Fortran 77 compiler version
configure:4037: gfortran --version >&5
GNU Fortran (Ubuntu 4.3.3-5ubuntu4) 4.3.3
Copyright (C) 2008 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:4040: $? = 0
configure:4047: gfortran -v >&5
Using built-in specs.
Target: i486-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 4.3.3-5ubuntu4'
--with-bugurl=file:///usr/share/doc/gcc-4.3/README.Bugs
--enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --enable-shared
--with-system-zlib --libexecdir=/usr/lib --without-included-gettext
--enable-threads=posix --enable-nls --with-gxx-include-dir=/usr/include/c++/4.3
--program-suffix=-4.3 --enable-clocale=gnu --enable-libstdcxx-debug
--enable-objc-gc --enable-mpfr --enable-targets=all --with-tune=generic
--enable-checking=release --build=i486-linux-gnu --host=i486-linux-gnu
--target=i486-linux-gnu
Thread model: posix
gcc version 4.3.3 (Ubuntu 4.3.3-5ubuntu4)
configure:4050: $? = 0
configure:4057: gfortran -V >&5
gfortran: '-V' option must have argument
configure:4060: $? = 1
configure:4068: checking whether we are using the GNU Fortran 77 compiler
configure:4087: gfortran -c conftest.F >&5
configure:4093: $? = 0
configure:4110: result: yes
configure:4116: checking whether gfortran accepts -g
configure:4133: gfortran -c -g conftest.f >&5
configure:4139: $? = 0
configure:4155: result: yes
configure:4186: checking how to run the C preprocessor
configure:4226: gcc -E conftest.c
configure:4232: $? = 0
configure:4263: gcc -E conftest.c
conftest.c:13:28: error: ac_nonexistent.h: No such file or directory
configure:4269: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME ""
| #define PACKAGE_TARNAME ""
| #define PACKAGE_VERSION ""
| #define PACKAGE_STRING ""
| #define PACKAGE_BUGREPORT ""
| #define MAGICS_VERSION "2.6.4"
| #define MAGICS_NAME "Magics++"
| #define MAGICS_RELEASE_DATE "03-August-2009"
| #define MAGICS_INSTALL_PATH "/usr/local/magics3"
| #define MAGICS_SITE "outside"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:4302: result: gcc -E
configure:4331: gcc -E conftest.c
configure:4337: $? = 0
configure:4368: gcc -E conftest.c
conftest.c:13:28: error: ac_nonexistent.h: No such file or directory
configure:4374: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME ""
| #define PACKAGE_TARNAME ""
| #define PACKAGE_VERSION ""
| #define PACKAGE_STRING ""
| #define PACKAGE_BUGREPORT ""
| #define MAGICS_VERSION "2.6.4"
| #define MAGICS_NAME "Magics++"
| #define MAGICS_RELEASE_DATE "03-August-2009"
| #define MAGICS_INSTALL_PATH "/usr/local/magics3"
| #define MAGICS_SITE "outside"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:4412: checking for grep that handles long lines and -e
configure:4486: result: /bin/grep
configure:4491: checking for egrep
configure:4569: result: /bin/grep -E
configure:4575: checking for AIX
configure:4597: result: no
configure:4688: checking build system type
configure:4706: result: i686-pc-linux-gnu
configure:4728: checking host system type
configure:4743: result: i686-pc-linux-gnu
configure:4765: checking for a sed that does not truncate output
configure:4821: result: /bin/sed
configure:4835: checking for ld used by gcc
configure:4902: result: /usr/bin/ld
configure:4911: checking if the linker (/usr/bin/ld) is GNU ld
configure:4926: result: yes
configure:4931: checking for /usr/bin/ld option to reload object files
configure:4938: result: -r
configure:4956: checking for BSD-compatible nm
configure:5005: result: /usr/bin/nm -B
configure:5009: checking whether ln -s works
configure:5013: result: yes
configure:5020: checking how to recognize dependent libraries
configure:5206: result: pass_all
configure:5441: checking for ANSI C header files
configure:5471: gcc -c -g -O2 conftest.c >&5
configure:5477: $? = 0
configure:5576: gcc -o conftest -g -O2 conftest.c >&5
configure:5579: $? = 0
configure:5585: ./conftest
configure:5588: $? = 0
configure:5605: result: yes
configure:5629: checking for sys/types.h
configure:5650: gcc -c -g -O2 conftest.c >&5
configure:5656: $? = 0
configure:5672: result: yes
configure:5629: checking for sys/stat.h
configure:5650: gcc -c -g -O2 conftest.c >&5
configure:5656: $? = 0
configure:5672: result: yes
configure:5629: checking for stdlib.h
configure:5650: gcc -c -g -O2 conftest.c >&5
configure:5656: $? = 0
configure:5672: result: yes
configure:5629: checking for string.h
configure:5650: gcc -c -g -O2 conftest.c >&5
configure:5656: $? = 0
configure:5672: result: yes
configure:5629: checking for memory.h
configure:5650: gcc -c -g -O2 conftest.c >&5
configure:5656: $? = 0
configure:5672: result: yes
configure:5629: checking for strings.h
configure:5650: gcc -c -g -O2 conftest.c >&5
configure:5656: $? = 0
configure:5672: result: yes
configure:5629: checking for inttypes.h
configure:5650: gcc -c -g -O2 conftest.c >&5
configure:5656: $? = 0
configure:5672: result: yes
configure:5629: checking for stdint.h
configure:5650: gcc -c -g -O2 conftest.c >&5
configure:5656: $? = 0
configure:5672: result: yes
configure:5629: checking for unistd.h
configure:5650: gcc -c -g -O2 conftest.c >&5
configure:5656: $? = 0
configure:5672: result: yes
configure:5699: checking dlfcn.h usability
configure:5716: gcc -c -g -O2 conftest.c >&5
configure:5722: $? = 0
configure:5736: result: yes
configure:5740: checking dlfcn.h presence
configure:5755: gcc -E conftest.c
configure:5761: $? = 0
configure:5775: result: yes
configure:5803: checking for dlfcn.h
configure:5811: result: yes
configure:5834: checking how to run the C++ preprocessor
configure:5870: g++ -E conftest.cpp
configure:5876: $? = 0
configure:5907: g++ -E conftest.cpp
conftest.cpp:24:28: error: ac_nonexistent.h: No such file or directory
configure:5913: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME ""
| #define PACKAGE_TARNAME ""
| #define PACKAGE_VERSION ""
| #define PACKAGE_STRING ""
| #define PACKAGE_BUGREPORT ""
| #define MAGICS_VERSION "2.6.4"
| #define MAGICS_NAME "Magics++"
| #define MAGICS_RELEASE_DATE "03-August-2009"
| #define MAGICS_INSTALL_PATH "/usr/local/magics3"
| #define MAGICS_SITE "outside"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:5946: result: g++ -E
configure:5975: g++ -E conftest.cpp
configure:5981: $? = 0
configure:6012: g++ -E conftest.cpp
conftest.cpp:24:28: error: ac_nonexistent.h: No such file or directory
configure:6018: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME ""
| #define PACKAGE_TARNAME ""
| #define PACKAGE_VERSION ""
| #define PACKAGE_STRING ""
| #define PACKAGE_BUGREPORT ""
| #define MAGICS_VERSION "2.6.4"
| #define MAGICS_NAME "Magics++"
| #define MAGICS_RELEASE_DATE "03-August-2009"
| #define MAGICS_INSTALL_PATH "/usr/local/magics3"
| #define MAGICS_SITE "outside"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:6063: checking the maximum length of command line arguments
configure:6175: result: 1572864
configure:6187: checking command to parse /usr/bin/nm -B output from gcc object
configure:6292: g++ -c -g -O2 conftest.cpp >&5
configure:6295: $? = 0
configure:6299: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[
]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][
]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' \> conftest.nm
configure:6302: $? = 0
configure:6354: g++ -o conftest -g -O2 conftest.cpp conftstm.o >&5
configure:6357: $? = 0
configure:6395: result: ok
configure:6399: checking for objdir
configure:6414: result: .libs
configure:6506: checking for ar
configure:6522: found /usr/bin/ar
configure:6533: result: ar
configure:6602: checking for ranlib
configure:6618: found /usr/bin/ranlib
configure:6629: result: ranlib
configure:6698: checking for strip
configure:6714: found /usr/bin/strip
configure:6725: result: strip
configure:7011: checking if gcc supports -fno-rtti -fno-exceptions
configure:7029: gcc -c -g -O2 -fno-rtti -fno-exceptions conftest.c >&5
cc1: warning: command line option "-fno-rtti" is valid for C++/ObjC++ but not
for C
configure:7033: $? = 0
configure:7046: result: no
configure:7061: checking for gcc option to produce PIC
configure:7293: result: -fPIC
configure:7301: checking if gcc PIC flag -fPIC works
configure:7319: gcc -c -g -O2 -fPIC -DPIC conftest.c >&5
configure:7323: $? = 0
configure:7336: result: yes
configure:7364: checking if gcc static flag -static works
configure:7392: result: yes
configure:7402: checking if gcc supports -c -o file.o
configure:7423: gcc -c -g -O2 -o out/conftest2.o conftest.c >&5
configure:7427: $? = 0
configure:7449: result: yes
configure:7475: checking whether the gcc linker (/usr/bin/ld) supports shared
libraries
configure:8455: result: yes
configure:8476: checking whether -lc should be explicitly linked in
configure:8481: gcc -c -g -O2 conftest.c >&5
configure:8484: $? = 0
configure:8499: gcc -shared conftest.o -v -Wl,-soname -Wl,conftest -o conftest
2\>\&1 \| grep -lc \>/dev/null 2\>\&1
configure:8502: $? = 0
configure:8514: result: no
configure:8522: checking dynamic linker characteristics
configure:9124: result: GNU/Linux ld.so
configure:9133: checking how to hardcode library paths into programs
configure:9158: result: immediate
configure:9172: checking whether stripping libraries is possible
configure:9177: result: yes
configure:9979: checking if libtool supports shared libraries
configure:9981: result: yes
configure:9984: checking whether to build shared libraries
configure:10005: result: yes
configure:10008: checking whether to build static libraries
configure:10012: result: yes
configure:10105: creating libtool
configure:10693: checking for ld used by g++
configure:10760: result: /usr/bin/ld
configure:10769: checking if the linker (/usr/bin/ld) is GNU ld
configure:10784: result: yes
configure:10835: checking whether the g++ linker (/usr/bin/ld) supports shared
libraries
configure:11809: result: yes
configure:11827: g++ -c -g -O2 conftest.cpp >&5
configure:11830: $? = 0
configure:11982: checking for g++ option to produce PIC
configure:12266: result: -fPIC
configure:12274: checking if g++ PIC flag -fPIC works
configure:12292: g++ -c -g -O2 -fPIC -DPIC conftest.cpp >&5
configure:12296: $? = 0
configure:12309: result: yes
configure:12337: checking if g++ static flag -static works
configure:12365: result: yes
configure:12375: checking if g++ supports -c -o file.o
configure:12396: g++ -c -g -O2 -o out/conftest2.o conftest.cpp >&5
configure:12400: $? = 0
configure:12422: result: yes
configure:12448: checking whether the g++ linker (/usr/bin/ld) supports shared
libraries
configure:12473: result: yes
configure:12540: checking dynamic linker characteristics
configure:13090: result: GNU/Linux ld.so
configure:13099: checking how to hardcode library paths into programs
configure:13124: result: immediate
configure:13658: checking if libtool supports shared libraries
configure:13660: result: yes
configure:13663: checking whether to build shared libraries
configure:13683: result: yes
configure:13686: checking whether to build static libraries
configure:13690: result: yes
configure:13700: checking for gfortran option to produce PIC
configure:13932: result: -fPIC
configure:13940: checking if gfortran PIC flag -fPIC works
configure:13958: gfortran -c -g -O2 -fPIC conftest.f >&5
configure:13962: $? = 0
configure:13975: result: yes
configure:14003: checking if gfortran static flag -static works
configure:14031: result: yes
configure:14041: checking if gfortran supports -c -o file.o
configure:14062: gfortran -c -g -O2 -o out/conftest2.o conftest.f >&5
configure:14066: $? = 0
configure:14088: result: yes
configure:14114: checking whether the gfortran linker (/usr/bin/ld) supports
shared libraries
configure:15074: result: yes
configure:15141: checking dynamic linker characteristics
configure:15691: result: GNU/Linux ld.so
configure:15700: checking how to hardcode library paths into programs
configure:15725: result: immediate
configure:19462: gcc -c -g -O2 -m32 -ansi -std=c99 -I/usr/include/freetype2
-I/usr/include -I/usr/X11R6/include -I/usr/local/include conftest.c >&5
configure:19468: $? = 0
configure:19483: result: Test if GCC 4 yes
configure:19909: checking gd.h usability
configure:19926: gcc -c -g -O2 -m32 -ansi -std=c99 -I/usr/include/freetype2
-I/usr/include -I/usr/X11R6/include -I/usr/local/include conftest.c >&5
configure:19932: $? = 0
configure:19946: result: yes
configure:19950: checking gd.h presence
configure:19965: gcc -E -I/usr/include/freetype2 -I/usr/include
-I/usr/X11R6/include -I/usr/local/include conftest.c
configure:19971: $? = 0
configure:19985: result: yes
configure:20013: checking for gd.h
configure:20020: result: yes
configure:20177: checking ft2build.h usability
configure:20194: g++ -c -g -O2 -m32 -fno-gnu-keywords -ansi -std=c++98
-Wno-deprecated -I/usr/include/freetype2 -I/usr/include -I/usr/X11R6/include
-I/usr/local/include conftest.cpp >&5
conftest.cpp:61:22: error: ft2build.h: No such file or directory
configure:20200: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME ""
| #define PACKAGE_TARNAME ""
| #define PACKAGE_VERSION ""
| #define PACKAGE_STRING ""
| #define PACKAGE_BUGREPORT ""
| #define MAGICS_VERSION "2.6.4"
| #define MAGICS_NAME "Magics++"
| #define MAGICS_RELEASE_DATE "03-August-2009"
| #define MAGICS_INSTALL_PATH "/usr/local/magics3"
| #define MAGICS_SITE "outside"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define MAGICS_TTF_PATH "share/ttf/"
| #define MAGICS_EXCEPTION 1
| #define MAGICS_RASTER 1
| #define MAGICS_TERRALIB 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <ft2build.h>
configure:20214: result: no
configure:20218: checking ft2build.h presence
configure:20233: g++ -E -I/usr/include/freetype2 -I/usr/include
-I/usr/X11R6/include -I/usr/local/include conftest.cpp
conftest.cpp:28:22: error: ft2build.h: No such file or directory
configure:20239: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME ""
| #define PACKAGE_TARNAME ""
| #define PACKAGE_VERSION ""
| #define PACKAGE_STRING ""
| #define PACKAGE_BUGREPORT ""
| #define MAGICS_VERSION "2.6.4"
| #define MAGICS_NAME "Magics++"
| #define MAGICS_RELEASE_DATE "03-August-2009"
| #define MAGICS_INSTALL_PATH "/usr/local/magics3"
| #define MAGICS_SITE "outside"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define MAGICS_TTF_PATH "share/ttf/"
| #define MAGICS_EXCEPTION 1
| #define MAGICS_RASTER 1
| #define MAGICS_TERRALIB 1
| /* end confdefs.h. */
| #include <ft2build.h>
configure:20253: result: no
configure:20281: checking for ft2build.h
configure:20288: result: no
configure:20298: WARNING: could not successfully compile with FreeType2 using
the
configure:20300: WARNING: default compiler flags;
configure:20321: checking expat.h usability
configure:20338: g++ -c -g -O2 -m32 -fno-gnu-keywords -ansi -std=c++98
-Wno-deprecated -I/usr/include/freetype2 -I/usr/include -I/usr/X11R6/include
-I/usr/local/include conftest.cpp >&5
configure:20344: $? = 0
configure:20358: result: yes
configure:20362: checking expat.h presence
configure:20377: g++ -E -I/usr/include/freetype2 -I/usr/include
-I/usr/X11R6/include -I/usr/local/include conftest.cpp
configure:20383: $? = 0
configure:20397: result: yes
configure:20425: checking for expat.h
configure:20432: result: yes
configure:20468: checking netcdfcpp.h usability
configure:20485: g++ -c -g -O2 -m32 -fno-gnu-keywords -ansi -std=c++98
-Wno-deprecated -I/usr/local/netcdf3/include -I/usr/include/freetype2
-I/usr/include -I/usr/X11R6/include -I/usr/local/include conftest.cpp >&5
configure:20491: $? = 0
configure:20505: result: yes
configure:20509: checking netcdfcpp.h presence
configure:20524: g++ -E -I/usr/local/netcdf3/include -I/usr/include/freetype2
-I/usr/include -I/usr/X11R6/include -I/usr/local/include conftest.cpp
configure:20530: $? = 0
configure:20544: result: yes
configure:20572: checking for netcdfcpp.h
configure:20579: result: yes
configure:20717: checking for Jasper needed by Grib API
configure:20720: checking for jas_stream_memopen in -ljasper
configure:20755: g++ -o conftest -g -O2 -m32 -fno-gnu-keywords -ansi -std=c++98
-Wno-deprecated -I/usr/local/netcdf3/include -I/usr/include/freetype2
-I/usr/include -I/usr/X11R6/include -I/usr/local/include
-L/usr/local/netcdf3/lib -L/usr/X11R6/lib conftest.cpp -ljasper >&5
/usr/local/lib/libjasper.a(jas_stream.o): In function `jas_stream_tmpfile':
/home/javier/javier/SOFT_ERA/jasper-1.900.1/src/libjasper/base/jas_stream.c:368:
warning: the use of `tmpnam' is dangerous, better use `mkstemp'
configure:20761: $? = 0
configure:20779: result: yes
configure:20807: checking for grib_get_message in -lgrib_api
configure:20842: g++ -o conftest -g -O2 -m32 -fno-gnu-keywords -ansi -std=c++98
-Wno-deprecated -I/usr/local/include -I/usr/local/netcdf3/include
-I/usr/include/freetype2 -I/usr/include -I/usr/X11R6/include
-I/usr/local/include -L/usr/local/lib -L/usr/local/netcdf3/lib
-L/usr/X11R6/lib conftest.cpp -lgrib_api -ljasper >&5
/usr/local/lib/libjasper.a(jas_stream.o): In function `jas_stream_tmpfile':
/home/javier/javier/SOFT_ERA/jasper-1.900.1/src/libjasper/base/jas_stream.c:368:
warning: the use of `tmpnam' is dangerous, better use `mkstemp'
configure:20848: $? = 0
configure:20866: result: yes
configure:20983: checking for gdImagePng in -lgd
configure:21018: g++ -o conftest -g -O2 -m32 -fno-gnu-keywords -ansi -std=c++98
-Wno-deprecated -I/usr/local/include -I/usr/local/netcdf3/include
-I/usr/include/freetype2 -I/usr/include -I/usr/X11R6/include
-I/usr/local/include -L/usr/local/lib -L/usr/local/netcdf3/lib
-L/usr/X11R6/lib conftest.cpp -lgd -ljasper >&5
/tmp/cc2Q2E9Z.o: In function `main':
/home/javier/javier/SOFT_ERA/Magics3/conftest.cpp:39: undefined reference to
`gdImagePng'
collect2: ld returned 1 exit status
configure:21024: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME ""
| #define PACKAGE_TARNAME ""
| #define PACKAGE_VERSION ""
| #define PACKAGE_STRING ""
| #define PACKAGE_BUGREPORT ""
| #define MAGICS_VERSION "2.6.4"
| #define MAGICS_NAME "Magics++"
| #define MAGICS_RELEASE_DATE "03-August-2009"
| #define MAGICS_INSTALL_PATH "/usr/local/magics3"
| #define MAGICS_SITE "outside"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define MAGICS_TTF_PATH "share/ttf/"
| #define MAGICS_EXCEPTION 1
| #define MAGICS_RASTER 1
| #define MAGICS_TERRALIB 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char gdImagePng ();
| int
| main ()
| {
| return gdImagePng ();
| ;
| return 0;
| }
configure:21042: result: no
configure:21053: checking for gdImageGif in -lgd
configure:21088: g++ -o conftest -g -O2 -m32 -fno-gnu-keywords -ansi -std=c++98
-Wno-deprecated -I/usr/local/include -I/usr/local/netcdf3/include
-I/usr/include/freetype2 -I/usr/include -I/usr/X11R6/include
-I/usr/local/include -L/usr/local/lib -L/usr/local/netcdf3/lib
-L/usr/X11R6/lib conftest.cpp -lgd -ljasper >&5
configure:21094: $? = 0
configure:21112: result: yes
configure:21124: checking for gdImageGifAnimEnd in -lgd
configure:21159: g++ -o conftest -g -O2 -m32 -fno-gnu-keywords -ansi -std=c++98
-Wno-deprecated -I/usr/local/include -I/usr/local/netcdf3/include
-I/usr/include/freetype2 -I/usr/include -I/usr/X11R6/include
-I/usr/local/include -L/usr/local/lib -L/usr/local/netcdf3/lib
-L/usr/X11R6/lib conftest.cpp -lgd -ljasper >&5
configure:21165: $? = 0
configure:21183: result: yes
configure:21213: checking for FcInitLoadConfigAndFonts in -lfontconfig
configure:21248: g++ -o conftest -g -O2 -m32 -fno-gnu-keywords -ansi -std=c++98
-Wno-deprecated -I/usr/local/include -I/usr/local/netcdf3/include
-I/usr/include/freetype2 -I/usr/include -I/usr/X11R6/include
-I/usr/local/include -L/usr/local/lib -L/usr/local/netcdf3/lib
-L/usr/X11R6/lib conftest.cpp -lfontconfig -ljasper >&5
/usr/bin/ld: cannot find -lfontconfig
collect2: ld returned 1 exit status
configure:21254: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME ""
| #define PACKAGE_TARNAME ""
| #define PACKAGE_VERSION ""
| #define PACKAGE_STRING ""
| #define PACKAGE_BUGREPORT ""
| #define MAGICS_VERSION "2.6.4"
| #define MAGICS_NAME "Magics++"
| #define MAGICS_RELEASE_DATE "03-August-2009"
| #define MAGICS_INSTALL_PATH "/usr/local/magics3"
| #define MAGICS_SITE "outside"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define MAGICS_TTF_PATH "share/ttf/"
| #define MAGICS_EXCEPTION 1
| #define MAGICS_RASTER 1
| #define MAGICS_TERRALIB 1
| #define MAGICS_GIF 1
| #define MAGICS_GIF_ANIMATED 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char FcInitLoadConfigAndFonts ();
| int
| main ()
| {
| return FcInitLoadConfigAndFonts ();
| ;
| return 0;
| }
configure:21272: result: no
configure:22050: checking for XML_ParserCreate in -lexpat
configure:22085: g++ -o conftest -g -O2 -m32 -fno-gnu-keywords -ansi -std=c++98
-Wno-deprecated -I/usr/local/include -I/usr/local/netcdf3/include
-I/usr/include/freetype2 -I/usr/include -I/usr/X11R6/include
-I/usr/local/include -L/usr/local/lib -L/usr/local/netcdf3/lib
-L/usr/X11R6/lib conftest.cpp -lexpat -ljasper >&5
configure:22091: $? = 0
configure:22109: result: yes
configure:22125: checking for ncvarid in -lnetcdf
configure:22160: g++ -o conftest -g -O2 -m32 -fno-gnu-keywords -ansi -std=c++98
-Wno-deprecated -I/usr/local/include -I/usr/local/netcdf3/include
-I/usr/include/freetype2 -I/usr/include -I/usr/X11R6/include
-I/usr/local/include -L/usr/local/lib -L/usr/local/netcdf3/lib
-L/usr/X11R6/lib conftest.cpp -lnetcdf -lexpat -ljasper >&5
/usr/local/lib/libnetcdf.a(nc4attr.o): In function `nc_del_att':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4attr.c:813: undefined
reference to `H5Dclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4attr.c:802: undefined
reference to `H5Adelete'
/usr/local/lib/libnetcdf.a(nc4attr.o): In function `nc_rename_att':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4attr.c:714: undefined
reference to `H5Dclose'
/usr/local/lib/libnetcdf.a(nc4internal.o): In function `type_list_del':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4internal.c:930: undefined
reference to `H5Tclose'
/usr/local/lib/libnetcdf.a(nc4internal.o): In function `nc4_rec_grp_del':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4internal.c:1034: undefined
reference to `H5Tclose'
/usr/local/lib/libnetcdf.a(nc4internal.o): In function `var_list_del':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4internal.c:893: undefined
reference to `H5Dclose'
/usr/local/lib/libnetcdf.a(nc4internal.o): In function `nc4_rec_grp_del':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4internal.c:1050: undefined
reference to `H5Tclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4internal.c:1065: undefined
reference to `H5Dclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4internal.c:1047: undefined
reference to `H5Dclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4internal.c:1087: undefined
reference to `H5Gclose'
/usr/local/lib/libnetcdf.a(nc4internal.o): In function `find_var_shape_grp':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4internal.c:133: undefined
reference to `H5Sclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4internal.c:135: undefined
reference to `H5Dclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4internal.c:102: undefined
reference to `H5Dget_space'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4internal.c:105: undefined
reference to `H5Sget_simple_extent_type'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4internal.c:113: undefined
reference to `H5Sget_simple_extent_ndims'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4internal.c:121: undefined
reference to `H5Sget_simple_extent_dims'
/usr/local/lib/libnetcdf.a(nc4internal.o): In function `nc4_rec_find_hdf_type':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4internal.c:394: undefined
reference to `H5Tequal'
/usr/local/lib/libnetcdf.a(nc4var.o): In function `nc_rename_var':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4var.c:797: undefined
reference to `H5Gmove'
/usr/local/lib/libnetcdf.a(nc4file.o): In function `sync_netcdf4_file':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:766: undefined
reference to `H5Fflush'
/usr/local/lib/libnetcdf.a(nc4file.o): In function `close_netcdf4_file':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:833: undefined
reference to `H5Fclose'
/usr/local/lib/libnetcdf.a(nc4file.o): In function `nc_open_file':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:514: undefined
reference to `H5Eset_auto1'
/usr/local/lib/libnetcdf.a(nc4file.o): In function `nc4_open_file':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:388: undefined
reference to `H5check_version'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:402: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:402: undefined
reference to `H5P_CLS_FILE_ACCESS_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:402: undefined
reference to `H5Pcreate'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:405: undefined
reference to `H5Pset_fclose_degree'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:471: undefined
reference to `H5Pclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:472: undefined
reference to `H5Fclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:388: undefined
reference to `H5check_version'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:408: undefined
reference to `H5Pset_cache'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:433: undefined
reference to `H5Pset_libver_bounds'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:439: undefined
reference to `H5Fopen'
/usr/local/lib/libnetcdf.a(nc4file.o): In function `nc_create_file':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:280: undefined
reference to `H5Eset_auto1'
/usr/local/lib/libnetcdf.a(nc4file.o): In function `nc4_create_file':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:177: undefined
reference to `H5check_version'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:200: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:200: undefined
reference to `H5P_CLS_FILE_ACCESS_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:200: undefined
reference to `H5Pcreate'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:203: undefined
reference to `H5Pset_fclose_degree'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:262: undefined
reference to `H5Fclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:177: undefined
reference to `H5check_version'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:205: undefined
reference to `H5Pset_cache'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:232: undefined
reference to `H5Pset_libver_bounds'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:234: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:234: undefined
reference to `H5P_CLS_FILE_CREATE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:234: undefined
reference to `H5Pcreate'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:236: undefined
reference to `H5Pset_link_creation_order'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:239: undefined
reference to `H5Pset_attr_creation_order'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:244: undefined
reference to `H5Fcreate'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:248: undefined
reference to `H5Gopen2'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4file.c:253: undefined
reference to `H5Pclose'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `nc4_rec_match_dimscales':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4630: undefined
reference to `H5Gget_objinfo'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `dimscale_visitor':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:125: undefined
reference to `H5Gget_objinfo'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `get_netcdf_type':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1202: undefined
reference to `H5Tget_class'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1209: undefined
reference to `H5Tis_variable_str'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1220: undefined
reference to `H5Tget_native_type'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1223: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1223: undefined
reference to `H5T_NATIVE_SCHAR_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1223: undefined
reference to `H5Tequal'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1230: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1230: undefined
reference to `H5T_NATIVE_SHORT_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1230: undefined
reference to `H5Tequal'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1237: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1237: undefined
reference to `H5T_NATIVE_INT_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1237: undefined
reference to `H5Tequal'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1244: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1244: undefined
reference to `H5T_NATIVE_FLOAT_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1244: undefined
reference to `H5Tequal'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1251: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1251: undefined
reference to `H5T_NATIVE_DOUBLE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1251: undefined
reference to `H5Tequal'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1258: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1258: undefined
reference to `H5T_NATIVE_UCHAR_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1258: undefined
reference to `H5Tequal'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1265: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1265: undefined
reference to `H5T_NATIVE_USHORT_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1265: undefined
reference to `H5Tequal'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1272: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1272: undefined
reference to `H5T_NATIVE_UINT_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1272: undefined
reference to `H5Tequal'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1279: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1279: undefined
reference to `H5T_NATIVE_LLONG_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1279: undefined
reference to `H5Tequal'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1286: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1286: undefined
reference to `H5T_NATIVE_ULLONG_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1286: undefined
reference to `H5Tequal'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `nc4_open_var_grp2':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:175: undefined
reference to `H5Dopen1'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `nc4_open_var_grp':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:152: undefined
reference to `H5Dopen1'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `var_exists':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2315: undefined
reference to `H5Gget_num_objs'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2319: undefined
reference to `H5Oget_info_by_idx'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2322: undefined
reference to `H5Lget_name_by_idx'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2326: undefined
reference to `H5Lget_name_by_idx'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function
`nc4_free_global_hdf_string_typeid':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:495: undefined
reference to `H5Tclose'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `write_nc3_strict_att':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2150: undefined
reference to `H5Aget_num_attrs'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2156: undefined
reference to `H5Aget_name'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2154: undefined
reference to `H5Aopen_idx'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2179: undefined
reference to `H5Aclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2177: undefined
reference to `H5Sclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2168: undefined
reference to `H5Screate'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2170: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2170: undefined
reference to `H5T_NATIVE_INT_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2170: undefined
reference to `H5Acreate1'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2173: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2173: undefined
reference to `H5T_NATIVE_INT_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2173: undefined
reference to `H5Awrite'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2160: undefined
reference to `H5Aclose'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `get_hdf_typeid':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:453: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:453: undefined
reference to `H5T_NATIVE_ULLONG_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:445: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:445: undefined
reference to `H5T_NATIVE_LLONG_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:437: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:437: undefined
reference to `H5T_NATIVE_UINT_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:429: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:429: undefined
reference to `H5T_NATIVE_USHORT_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:421: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:421: undefined
reference to `H5T_NATIVE_UCHAR_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:413: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:413: undefined
reference to `H5T_NATIVE_DOUBLE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:405: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:405: undefined
reference to `H5T_NATIVE_FLOAT_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:397: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:397: undefined
reference to `H5T_NATIVE_INT_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:389: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:389: undefined
reference to `H5T_NATIVE_SHORT_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:378: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:378: undefined
reference to `H5T_C_S1_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:378: undefined
reference to `H5Tcopy'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:379: undefined
reference to `H5Tset_strpad'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:375: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:375: undefined
reference to `H5T_NATIVE_SCHAR_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:419: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:419: undefined
reference to `H5T_STD_U8BE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:411: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:411: undefined
reference to `H5T_IEEE_F64BE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:395: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:395: undefined
reference to `H5T_STD_I32BE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:403: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:403: undefined
reference to `H5T_IEEE_F32BE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:451: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:451: undefined
reference to `H5T_STD_U64BE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:443: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:443: undefined
reference to `H5T_STD_I64BE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:427: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:427: undefined
reference to `H5T_STD_U16BE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:435: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:435: undefined
reference to `H5T_STD_U32BE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:373: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:373: undefined
reference to `H5T_STD_I8BE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:387: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:387: undefined
reference to `H5T_STD_I16BE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:485: undefined
reference to `H5Tclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:371: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:371: undefined
reference to `H5T_STD_I8LE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:425: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:425: undefined
reference to `H5T_STD_U16LE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:417: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:417: undefined
reference to `H5T_STD_U8LE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:433: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:433: undefined
reference to `H5T_STD_U32LE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:441: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:441: undefined
reference to `H5T_STD_I64LE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:393: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:393: undefined
reference to `H5T_STD_I32LE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:385: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:385: undefined
reference to `H5T_STD_I16LE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:401: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:401: undefined
reference to `H5T_IEEE_F32LE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:409: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:409: undefined
reference to `H5T_IEEE_F64LE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:449: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:449: undefined
reference to `H5T_STD_U64LE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:460: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:460: undefined
reference to `H5T_C_S1_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:460: undefined
reference to `H5Tcopy'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:462: undefined
reference to `H5Tset_size'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `read_type':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1813: undefined
reference to `H5Topen2'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1817: undefined
reference to `H5Tget_class'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1841: undefined
reference to `H5Tis_variable_str'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1850: undefined
reference to `H5Tget_super'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1853: undefined
reference to `H5Tget_size'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1875: undefined
reference to `H5Tget_super'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1878: undefined
reference to `H5Tget_size'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1828: undefined
reference to `H5Tget_native_type'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1830: undefined
reference to `H5Tget_size'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1832: undefined
reference to `H5Tclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1866: undefined
reference to `H5Tget_size'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1967: undefined
reference to `H5Tget_nmembers'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1978: undefined
reference to `H5Tget_member_name'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1982: undefined
reference to `H5Tget_member_value'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1912: undefined
reference to `H5Tget_nmembers'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1922: undefined
reference to `H5Tget_member_type'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1924: undefined
reference to `H5Tget_class'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1935: undefined
reference to `H5Tget_member_name'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1936: undefined
reference to `H5Tget_member_offset'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1941: undefined
reference to `H5Tget_super'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1928: undefined
reference to `H5Tget_array_ndims'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1930: undefined
reference to `H5Tget_array_dims1'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `commit_type':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2094: undefined
reference to `H5Tvlen_create'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2100: undefined
reference to `H5Tcreate'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2129: undefined
reference to `H5Tcommit1'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2114: undefined
reference to `H5Tenum_create'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2119: undefined
reference to `H5Tenum_insert'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2055: undefined
reference to `H5Tcreate'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2071: undefined
reference to `H5Tarray_create1'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2079: undefined
reference to `H5Tinsert'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2082: undefined
reference to `H5Tclose'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `write_dim':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2579: undefined
reference to `H5Dextend'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2491: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2491: undefined
reference to `H5P_CLS_DATASET_CREATE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2491: undefined
reference to `H5Pcreate'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2498: undefined
reference to `H5Pset_chunk'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2503: undefined
reference to `H5Screate_simple'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2512: undefined
reference to `H5Pset_attr_creation_order'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2518: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2518: undefined
reference to `H5T_IEEE_F32BE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2518: undefined
reference to `H5Dcreate1'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2589: undefined
reference to `H5Gmove2'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2523: undefined
reference to `H5Sclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2525: undefined
reference to `H5Pclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2532: undefined
reference to `H5DSset_scale'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `rec_reattach_scales':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:67: undefined
reference to `H5DSattach_scale'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `nc4_delete_hdf5_att':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2012: undefined
reference to `H5Aget_num_attrs'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2017: undefined
reference to `H5Aopen_idx'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2019: undefined
reference to `H5Aget_name'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2028: undefined
reference to `H5Aclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2024: undefined
reference to `H5Adelete'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `pg_att_grpa':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1610: undefined
reference to `H5Aopen_name'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1614: undefined
reference to `H5Aget_type'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1616: undefined
reference to `H5Tget_class'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1777: undefined
reference to `H5Dclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1779: undefined
reference to `H5Aclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1781: undefined
reference to `H5Sclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1758: undefined
reference to `H5Screate'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1767: undefined
reference to `H5Acreate1'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1772: undefined
reference to `H5Awrite'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1622: undefined
reference to `H5Aget_space'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1624: undefined
reference to `H5Sget_simple_extent_ndims'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1626: undefined
reference to `H5Sget_simple_extent_npoints'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1741: undefined
reference to `H5Screate'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1749: undefined
reference to `H5Tset_size'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1751: undefined
reference to `H5Tset_strpad'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1763: undefined
reference to `H5Screate_simple'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1746: undefined
reference to `H5Screate'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1674: undefined
reference to `H5Tget_native_type'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1678: undefined
reference to `H5Aread'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1680: undefined
reference to `H5Tclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1702: undefined
reference to `H5Tclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1658: undefined
reference to `H5Sget_simple_extent_dims'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1694: undefined
reference to `H5Tget_native_type'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1696: undefined
reference to `H5Aread'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1698: undefined
reference to `H5Tclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1641: undefined
reference to `H5Tget_size'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1687: undefined
reference to `H5Aread'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `read_dataset':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4343: undefined
reference to `H5Dopen1'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4347: undefined
reference to `H5Dget_space'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4349: undefined
reference to `H5Sget_simple_extent_ndims'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4353: undefined
reference to `H5Sget_simple_extent_dims'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4357: undefined
reference to `H5DSis_scale'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `read_scale':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:3992: undefined
reference to `H5DSget_scale_name'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `read_dataset':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4387: undefined
reference to `H5Dclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4389: undefined
reference to `H5Sclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4371: undefined
reference to `H5DSget_num_scales'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `read_var':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4085: undefined
reference to `H5Dget_create_plist'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4089: undefined
reference to `H5Pget_layout'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4103: undefined
reference to `H5Pget_nfilters'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4107: undefined
reference to `H5Pget_filter2'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4158: undefined
reference to `H5Tget_native_type'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4160: undefined
reference to `H5Tget_size'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4167: undefined
reference to `H5Pget_fill_value'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4169: undefined
reference to `H5Tclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4266: undefined
reference to `H5Pclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4268: undefined
reference to `H5Aclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4132: undefined
reference to `H5Dget_type'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4137: undefined
reference to `H5Tget_class'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4141: undefined
reference to `H5Tget_order'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4150: undefined
reference to `H5Pfill_value_defined'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `read_coord_dimids':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4027: undefined
reference to `H5Aopen_name'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4028: undefined
reference to `H5Aget_type'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4029: undefined
reference to `H5Aread'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4033: undefined
reference to `H5Tclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4034: undefined
reference to `H5Aclose'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `read_var':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4093: undefined
reference to `H5Pget_chunk'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4206: undefined
reference to `H5DSiterate_scales'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4221: undefined
reference to `H5Aget_num_attrs'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4232: undefined
reference to `H5Aopen_idx'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4234: undefined
reference to `H5Aget_name'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4228: undefined
reference to `H5Aclose'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `nc4_rec_read_metadata':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4417: undefined
reference to `H5Gopen2'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4429: undefined
reference to `H5Gget_num_objs'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4433: undefined
reference to `H5Oget_info_by_idx'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4437: undefined
reference to `H5Lget_name_by_idx'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4442: undefined
reference to `H5Lget_name_by_idx'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `read_grp_atts':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4285: undefined
reference to `H5Aget_num_attrs'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4290: undefined
reference to `H5Aopen_idx'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4292: undefined
reference to `H5Aget_name'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4323: undefined
reference to `H5Aclose'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `nc4_rec_read_metadata':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4495: undefined
reference to `H5Gclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4422: undefined
reference to `H5Gopen2'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `read_grp_atts':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:4289: undefined
reference to `H5Aclose'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `create_group':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2212: undefined
reference to `H5Gopen2'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2218: undefined
reference to `H5Pclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2220: undefined
reference to `H5Gclose'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `write_var':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2425: undefined
reference to `H5Dclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2429: undefined
reference to `H5Gunlink'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `var_create_dataset':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1359: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1359: undefined
reference to `H5P_CLS_DATASET_CREATE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1359: undefined
reference to `H5Pcreate'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1560: undefined
reference to `H5Pclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1562: undefined
reference to `H5Sclose'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `write_var':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2416: undefined
reference to `H5DSdetach_scale'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `create_group':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2197: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2197: undefined
reference to `H5P_CLS_GROUP_CREATE_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2197: undefined
reference to `H5Pcreate'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2199: undefined
reference to `H5Pset_link_creation_order'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2201: undefined
reference to `H5Pset_attr_creation_order'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2203: undefined
reference to `H5Gcreate2'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2206: undefined
reference to `H5Pclose'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `attach_dimscales':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2263: undefined
reference to `H5DSattach_scale'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `write_var':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1378: undefined
reference to `H5Pset_fill_value'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `var_create_dataset':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1396: undefined
reference to `H5Pset_shuffle'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1384: undefined
reference to `H5Pset_fill_value'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `rec_detach_scales':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:107: undefined
reference to `H5DSdetach_scale'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `var_create_dataset':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1516: undefined
reference to `H5Screate'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1521: undefined
reference to `H5Pset_attr_creation_order'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1528: undefined
reference to `H5Dcreate1'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1539: undefined
reference to `H5DSset_scale'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1506: undefined
reference to `H5Pset_chunk'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1511: undefined
reference to `H5Screate_simple'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `write_coord_dimids':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1330: undefined
reference to `H5Screate_simple'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1331: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1331: undefined
reference to `H5T_NATIVE_INT_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1331: undefined
reference to `H5Acreate1'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1333: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1333: undefined
reference to `H5T_NATIVE_INT_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1333: undefined
reference to `H5Awrite'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1336: undefined
reference to `H5Sclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1337: undefined
reference to `H5Aclose'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `var_create_dataset':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1468: undefined
reference to `H5Pset_layout'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1406: undefined
reference to `H5Pset_fletcher32'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1401: undefined
reference to `H5Pset_deflate'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `write_var':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:2399: undefined
reference to `H5Dclose'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `nc4_get_vara':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1162: undefined
reference to `H5Sclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1164: undefined
reference to `H5Sclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1166: undefined
reference to `H5Pclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1160: undefined
reference to `H5Tclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:921: undefined
reference to `H5Dget_space'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:927: undefined
reference to `H5Sget_simple_extent_dims'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1003: undefined
reference to `H5Sget_simple_extent_type'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1005: undefined
reference to `H5Screate'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1056: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1056: undefined
reference to `H5P_CLS_DATASET_XFER_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1056: undefined
reference to `H5Pcreate'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1077: undefined
reference to `H5Tget_native_type'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1079: undefined
reference to `H5Dread'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1104: undefined
reference to `H5Tclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1011: undefined
reference to `H5Sselect_hyperslab'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:1016: undefined
reference to `H5Screate_simple'
/usr/local/lib/libnetcdf.a(nc4hdf.o): In function `nc4_put_vara':
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:846: undefined
reference to `H5Sclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:848: undefined
reference to `H5Sclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:844: undefined
reference to `H5Tclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:634: undefined
reference to `H5Dget_space'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:640: undefined
reference to `H5Sget_simple_extent_dims'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:676: undefined
reference to `H5Sget_simple_extent_type'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:678: undefined
reference to `H5Screate'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:684: undefined
reference to `H5Sselect_hyperslab'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:690: undefined
reference to `H5Screate_simple'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:735: undefined
reference to `H5open'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:735: undefined
reference to `H5P_CLS_DATASET_XFER_g'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:735: undefined
reference to `H5Pcreate'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:819: undefined
reference to `H5Tget_native_type'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:821: undefined
reference to `H5Dwrite'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:823: undefined
reference to `H5Tclose'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:792: undefined
reference to `H5Dextend'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:794: undefined
reference to `H5Dget_space'
/home/javier/javier/netcdf/netcdf-4.0.1/libsrc4/nc4hdf.c:796: undefined
reference to `H5Sselect_hyperslab'
/usr/local/lib/libnetcdf.a(liboc_la-oc.o): In function `initialize':
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/oc.c:106: undefined
reference to `curl_version_info'
/usr/local/lib/libnetcdf.a(liboc_la-http.o): In function `curlopen':
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/http.c:236: undefined
reference to `curl_easy_init'
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/http.c:240: undefined
reference to `curl_easy_setopt'
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/http.c:244: undefined
reference to `curl_easy_setopt'
/usr/local/lib/libnetcdf.a(liboc_la-http.o): In function `fetch_url':
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/http.c:157: undefined
reference to `curl_easy_strerror'
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/http.c:132: undefined
reference to `curl_easy_setopt'
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/http.c:137: undefined
reference to `curl_easy_setopt'
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/http.c:142: undefined
reference to `curl_easy_setopt'
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/http.c:146: undefined
reference to `curl_easy_perform'
/usr/local/lib/libnetcdf.a(liboc_la-http.o): In function `file_fetch_url':
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/http.c:88: undefined
reference to `curl_easy_strerror'
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/http.c:61: undefined
reference to `curl_easy_setopt'
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/http.c:66: undefined
reference to `curl_easy_setopt'
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/http.c:71: undefined
reference to `curl_easy_setopt'
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/http.c:77: undefined
reference to `curl_easy_perform'
/usr/local/lib/libnetcdf.a(liboc_la-http.o): In function `curlclose':
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/http.c:257: undefined
reference to `curl_easy_cleanup'
/usr/local/lib/libnetcdf.a(liboc_la-curlfunctions.o): In function `set_verify':
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/curlfunctions.c:103:
undefined reference to `curl_easy_setopt'
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/curlfunctions.c:106:
undefined reference to `curl_easy_setopt'
/usr/local/lib/libnetcdf.a(liboc_la-curlfunctions.o): In function `set_cookies':
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/curlfunctions.c:88:
undefined reference to `curl_easy_setopt'
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/curlfunctions.c:92:
undefined reference to `curl_easy_setopt'
/usr/local/lib/libnetcdf.a(liboc_la-curlfunctions.o): In function `set_proxy':
/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/curlfunctions.c:49:
undefined reference to `curl_easy_setopt'
/usr/local/lib/libnetcdf.a(liboc_la-curlfunctions.o):/home/javier/javier/netcdf/netcdf-4.0.1/libncdap3/oc/curlfunctions.c:53:
more undefined references to `curl_easy_setopt' follow
collect2: ld returned 1 exit status
configure:22166: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME ""
| #define PACKAGE_TARNAME ""
| #define PACKAGE_VERSION ""
| #define PACKAGE_STRING ""
| #define PACKAGE_BUGREPORT ""
| #define MAGICS_VERSION "2.6.4"
| #define MAGICS_NAME "Magics++"
| #define MAGICS_RELEASE_DATE "03-August-2009"
| #define MAGICS_INSTALL_PATH "/usr/local/magics3"
| #define MAGICS_SITE "outside"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define MAGICS_TTF_PATH "share/ttf/"
| #define MAGICS_EXCEPTION 1
| #define MAGICS_RASTER 1
| #define MAGICS_TERRALIB 1
| #define MAGICS_GIF 1
| #define MAGICS_GIF_ANIMATED 1
| #define HAVE_LIBEXPAT 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char ncvarid ();
| int
| main ()
| {
| return ncvarid ();
| ;
| return 0;
| }
configure:22184: result: no
configure:22189: error: netcdf library not found.
## ---------------- ##
## Cache variables. ##
## ---------------- ##
ac_cv_build=i686-pc-linux-gnu
ac_cv_c_compiler_gnu=yes
ac_cv_cxx_compiler_gnu=yes
ac_cv_env_CAIRO_CFLAGS_set=
ac_cv_env_CAIRO_CFLAGS_value=
ac_cv_env_CAIRO_LIBS_set=
ac_cv_env_CAIRO_LIBS_value=
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=
ac_cv_env_CC_value=
ac_cv_env_CFLAGS_set=
ac_cv_env_CFLAGS_value=
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=
ac_cv_env_CXXFLAGS_value=
ac_cv_env_CXX_set=
ac_cv_env_CXX_value=
ac_cv_env_F77_set=
ac_cv_env_F77_value=
ac_cv_env_FFLAGS_set=
ac_cv_env_FFLAGS_value=
ac_cv_env_LDFLAGS_set=
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_PKG_CONFIG_set=
ac_cv_env_PKG_CONFIG_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_f77_compiler_gnu=yes
ac_cv_header_dlfcn_h=yes
ac_cv_header_expat_h=yes
ac_cv_header_ft2build_h=no
ac_cv_header_gd_h=yes
ac_cv_header_inttypes_h=yes
ac_cv_header_memory_h=yes
ac_cv_header_netcdfcpp_h=yes
ac_cv_header_stdc=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_unistd_h=yes
ac_cv_host=i686-pc-linux-gnu
ac_cv_lib_expat_XML_ParserCreate_=yes
ac_cv_lib_fontconfig_FcInitLoadConfigAndFonts=no
ac_cv_lib_gd_gdImageGif=yes
ac_cv_lib_gd_gdImageGifAnimEnd=yes
ac_cv_lib_gd_gdImagePng=no
ac_cv_lib_grib_api_grib_get_message=yes
ac_cv_lib_jasper_jas_stream_memopen=yes
ac_cv_lib_netcdf_ncvarid_=no
ac_cv_objext=o
ac_cv_path_EGREP='/bin/grep -E'
ac_cv_path_GREP=/bin/grep
ac_cv_path_install='/usr/bin/install -c'
ac_cv_prog_AWK=mawk
ac_cv_prog_CPP='gcc -E'
ac_cv_prog_CXXCPP='g++ -E'
ac_cv_prog_ac_ct_AR=ar
ac_cv_prog_ac_ct_CC=gcc
ac_cv_prog_ac_ct_CXX=g++
ac_cv_prog_ac_ct_F77=gfortran
ac_cv_prog_ac_ct_RANLIB=ranlib
ac_cv_prog_ac_ct_STRIP=strip
ac_cv_prog_cc_c89=
ac_cv_prog_cc_g=yes
ac_cv_prog_cxx_g=yes
ac_cv_prog_f77_g=yes
ac_cv_prog_make_make_set=yes
am_cv_CC_dependencies_compiler_type=gcc3
am_cv_CXX_dependencies_compiler_type=gcc3
lt_cv_deplibs_check_method=pass_all
lt_cv_file_magic_cmd='$MAGIC_CMD'
lt_cv_file_magic_test_file=
lt_cv_ld_reload_flag=-r
lt_cv_objdir=.libs
lt_cv_path_LD=/usr/bin/ld
lt_cv_path_LDCXX=/usr/bin/ld
lt_cv_path_NM='/usr/bin/nm -B'
lt_cv_path_SED=/bin/sed
lt_cv_prog_compiler_c_o=yes
lt_cv_prog_compiler_c_o_CXX=yes
lt_cv_prog_compiler_c_o_F77=yes
lt_cv_prog_compiler_rtti_exceptions=no
lt_cv_prog_gnu_ld=yes
lt_cv_prog_gnu_ldcxx=yes
lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[
]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][
]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'''
lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\) $/
{\"\1\", (lt_ptr) 0},/p'\'' -e '\''s/^[BCDEGRST] \([^ ]*\) \([^ ]*\)$/ {"\2",
(lt_ptr) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^. .* \(.*\)$/extern int
\1;/p'\'''
lt_cv_sys_max_cmd_len=1572864
lt_lt_cv_prog_compiler_c_o='"yes"'
lt_lt_cv_prog_compiler_c_o_CXX='"yes"'
lt_lt_cv_prog_compiler_c_o_F77='"yes"'
lt_lt_cv_sys_global_symbol_pipe='"sed -n -e '\''s/^.*[
]\\([ABCDGIRSTW][ABCDGIRSTW]*\\)[ ][
]*\\([_A-Za-z][_A-Za-z0-9]*\\)\$/\\1 \\2 \\2/p'\''"'
lt_lt_cv_sys_global_symbol_to_c_name_address='"sed -n -e '\''s/^: \\([^ ]*\\)
\$/ {\\\"\\1\\\", (lt_ptr) 0},/p'\'' -e '\''s/^[BCDEGRST] \\([^ ]*\\) \\([^
]*\\)\$/ {\"\\2\", (lt_ptr) \\&\\2},/p'\''"'
lt_lt_cv_sys_global_symbol_to_cdecl='"sed -n -e '\''s/^. .* \\(.*\\)\$/extern
int \\1;/p'\''"'
## ----------------- ##
## Output variables. ##
## ----------------- ##
ACLOCAL='${SHELL} /home/javier/javier/SOFT_ERA/Magics3/config/missing --run
aclocal-1.9'
AMDEPBACKSLASH='\'
AMDEP_FALSE='#'
AMDEP_TRUE=''
AMTAR='${SHELL} /home/javier/javier/SOFT_ERA/Magics3/config/missing --run tar'
AR='ar'
AUTOCONF='${SHELL} /home/javier/javier/SOFT_ERA/Magics3/config/missing --run
autoconf'
AUTOHEADER='${SHELL} /home/javier/javier/SOFT_ERA/Magics3/config/missing --run
autoheader'
AUTOMAKE='${SHELL} /home/javier/javier/SOFT_ERA/Magics3/config/missing --run
automake-1.9'
AWK='mawk'
AXX='-m32'
CAIRO_CFLAGS=''
CAIRO_LIBS=''
CC='gcc'
CCDEPMODE='depmode=gcc3'
CFLAGS='-g -O2 -m32 -ansi -std=c99'
CPP='gcc -E'
CPPFLAGS='-I/usr/local/include -I/usr/local/netcdf3/include
-I/usr/include/freetype2 -I/usr/include -I/usr/X11R6/include
-I/usr/local/include'
CPPLIBS=' -lstdc++'
CXX='g++'
CXXCPP='g++ -E'
CXXDEPMODE='depmode=gcc3'
CXXFLAGS='-g -O2 -m32 -fno-gnu-keywords -ansi -std=c++98 -Wno-deprecated'
CYGPATH_W='echo'
DEFS=''
DEPDIR='.deps'
ECHO='echo'
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP='/bin/grep -E'
EXEEXT=''
F77='gfortran'
FFLAGS='-g -O2 -m32'
FLIBS='-lgfortran'
GREP='/bin/grep'
GRIBAPI_LIBS='-lgrib_api'
GSVersion=''
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='${SHELL} $(install_sh) -c -s'
LDFLAGS='-L/usr/local/lib -L/usr/local/netcdf3/lib -L/usr/X11R6/lib'
LIBNAME='lib'
LIBOBJS=''
LIBS='-lexpat -ljasper'
LIBTOOL='$(SHELL) $(top_builddir)/libtool'
LN_S='ln -s'
LTLIBOBJS=''
MAGICS_32BIT_FALSE=''
MAGICS_32BIT_TRUE=''
MAGICS_3RDPARTY_INCLUDE=''
MAGICS_3RDPARTY_LIBS=''
MAGICS_ALLHEADERS_FALSE=''
MAGICS_ALLHEADERS_TRUE=''
MAGICS_APPS_FALSE=''
MAGICS_APPS_TRUE=''
MAGICS_BUFR_FALSE=''
MAGICS_BUFR_TRUE=''
MAGICS_CAIRO_FALSE=''
MAGICS_CAIRO_TRUE=''
MAGICS_DEBUG_FALSE=''
MAGICS_DEBUG_TRUE=''
MAGICS_EXCEPTION_FALSE=''
MAGICS_EXCEPTION_TRUE=''
MAGICS_KMZ_FALSE=''
MAGICS_KMZ_TRUE=''
MAGICS_LIBRARY_AGE='0'
MAGICS_LIBRARY_CURRENT='3'
MAGICS_LIBRARY_REVISION='0'
MAGICS_METVIEW_FALSE=''
MAGICS_METVIEW_TRUE=''
MAGICS_ODB_FALSE=''
MAGICS_ODB_TRUE=''
MAGICS_OPENGL_FALSE=''
MAGICS_OPENGL_TRUE=''
MAGICS_PACKAGE_NAME='Magics++'
MAGICS_PACKAGE_RELEASE_DATE='03-August-2009'
MAGICS_PACKAGE_VERSION='2.6.4'
MAGICS_PACKAGE_VERSION_ADDENDUM=''
MAGICS_PROF_FALSE=''
MAGICS_PROF_TRUE=''
MAGICS_PYTHON_FALSE=''
MAGICS_PYTHON_TRUE=''
MAGICS_RASTER_FALSE=''
MAGICS_RASTER_TRUE=''
MAGICS_SPOT_FALSE=''
MAGICS_SPOT_TRUE=''
MAGICS_SQL_FALSE=''
MAGICS_SQL_TRUE=''
MAGICS_TERRALIB_FALSE=''
MAGICS_TERRALIB_TRUE=''
MAGICS_VISIBILITY='-fvisibility=hidden'
MAKEINFO='${SHELL} /home/javier/javier/SOFT_ERA/Magics3/config/missing --run
makeinfo'
NUMPY_INCLUDE=''
OBJEXT='o'
PACKAGE='Magics++'
PACKAGE_BUGREPORT=''
PACKAGE_NAME=''
PACKAGE_STRING=''
PACKAGE_TARNAME=''
PACKAGE_VERSION=''
PATH_SEPARATOR=':'
PKGCONFIG_REQUIRES='Requires.private'
PKG_CONFIG=''
PLATFORM_DEFINES_MARS='-DLITTLE -DLITTLE_END -DI32 -DR64 -Dlinux'
PSDelegate=''
RANLIB='ranlib'
SED='/bin/sed'
SET_MAKE=''
SHELL='/bin/bash'
SITE_NAME='outside'
STRIP='strip'
VERSION='2.6.4'
ac_ct_CC='gcc'
ac_ct_CXX='g++'
ac_ct_F77='gfortran'
am__fastdepCC_FALSE='#'
am__fastdepCC_TRUE=''
am__fastdepCXX_FALSE='#'
am__fastdepCXX_TRUE=''
am__include='include'
am__leading_dot='.'
am__quote=''
am__tar='${AMTAR} chof - "$$tardir"'
am__untar='${AMTAR} xf -'
bindir='${exec_prefix}/bin'
build='i686-pc-linux-gnu'
build_alias=''
build_cpu='i686'
build_os='linux-gnu'
build_vendor='pc'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE}'
dvidir='${docdir}'
exec_prefix='NONE'
ghostscript_font_dir=''
host='i686-pc-linux-gnu'
host_alias=''
host_cpu='i686'
host_os='linux-gnu'
host_vendor='pc'
htmldir='${docdir}'
includedir='/usr/local/magics3/include/magics'
infodir='${datarootdir}/info'
install_sh='/home/javier/javier/SOFT_ERA/Magics3/config/install-sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
mkdir_p='mkdir -p --'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='/usr/local/magics3'
program_transform_name='s,x,x,'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
sysconfdir='${prefix}/etc'
target_alias=''
## ----------- ##
## confdefs.h. ##
## ----------- ##
#define PACKAGE_NAME ""
#define PACKAGE_TARNAME ""
#define PACKAGE_VERSION ""
#define PACKAGE_STRING ""
#define PACKAGE_BUGREPORT ""
#define MAGICS_VERSION "2.6.4"
#define MAGICS_NAME "Magics++"
#define MAGICS_RELEASE_DATE "03-August-2009"
#define MAGICS_INSTALL_PATH "/usr/local/magics3"
#define MAGICS_SITE "outside"
#define STDC_HEADERS 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
#define HAVE_DLFCN_H 1
#define MAGICS_TTF_PATH "share/ttf/"
#define MAGICS_EXCEPTION 1
#define MAGICS_RASTER 1
#define MAGICS_TERRALIB 1
#define MAGICS_GIF 1
#define MAGICS_GIF_ANIMATED 1
#define HAVE_LIBEXPAT 1
configure: exit 1
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by netCDF configure 4.0.1, which was
generated by GNU Autoconf 2.62. Invocation command line was
$ ./configure --prefix=/usr/local/netcdf3 --enable-netcdf-4
--with-hdf5=/usr/local/hdf5_20 --with-zlib=/usr/local --enable-dap
--with-curl=/usr/local
## --------- ##
## Platform. ##
## --------- ##
hostname = javier-laptop
uname -m = i686
uname -r = 2.6.28-14-generic
uname -s = Linux
uname -v = #47-Ubuntu SMP Sat Jul 25 00:28:35 UTC 2009
/usr/bin/uname -p = unknown
/bin/uname -X = unknown
/bin/arch = unknown
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = unknown
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /usr/local/sbin
PATH: /usr/local/bin
PATH: /usr/sbin
PATH: /usr/bin
PATH: /sbin
PATH: /bin
PATH: /usr/X11R6/bin
## ----------- ##
## Core tests. ##
## ----------- ##
configure:2291: netCDF 4.0.1
configure:2335: checking build system type
configure:2353: result: i686-pc-linux-gnu
configure:2375: checking host system type
configure:2390: result: i686-pc-linux-gnu
configure:2437: checking for a BSD-compatible install
configure:2505: result: /usr/bin/install -c
configure:2516: checking whether build environment is sane
configure:2559: result: yes
configure:2584: checking for a thread-safe mkdir -p
configure:2623: result: /bin/mkdir -p
configure:2636: checking for gawk
configure:2666: result: no
configure:2636: checking for mawk
configure:2652: found /usr/bin/mawk
configure:2663: result: mawk
configure:2674: checking whether make sets $(MAKE)
configure:2696: result: yes
configure:2888: checking user options
configure:2931: checking whether CXX is set to ''
configure:2935: result: no
configure:2939: checking whether FC is set to ''
configure:2943: result: no
configure:2947: checking whether F90 is set to ''
configure:2951: result: no
configure:2955: checking whether a NCIO_MINBLOCKSIZE was specified
configure:2965: result: 256
configure:2975: checking whether this is a netCDF-4.x build
configure:2983: result: yes
configure:2987: checking whether extra valgrind tests should be run
configure:2995: result: no
configure:3001: Processing NetCDF-4 options.
configure:3006: checking whether netCDF-4 is to be built
configure:3014: result: yes
configure:3030: checking whether new netCDF-4 C++ API is to be built
configure:3038: result: no
configure:3042: checking whether HDF5 should do data conversions
configure:3050: result: no
configure:3061: checking whether extra example tests should be run
configure:3069: result: no
configure:3073: checking whether parallel IO tests should be run
configure:3081: result: no
configure:3085: checking whether a location for the HDF5 library was specified
configure:3093: result: /usr/local/hdf5_20
configure:3099: checking whether a location for the ZLIB library was specified
configure:3107: result: /usr/local
configure:3113: checking whether a location for the SZLIB library was specified
configure:3121: result:
configure:3127: checking whether a default cache size for HDF5 was specified
configure:3137: result: 32000000
configure:3146: checking whether a default cache maximum number of elements for
HDF5 was specified
configure:3156: result: 1000
configure:3165: checking whether a default cache preemption for HDF5 was
specified
configure:3175: result: 0.75
configure:3184: checking whether netCDF-4 logging is enabled
configure:3192: result: no
configure:3212: checking whether DAP client is to be built
configure:3220: result: yes
configure:3246: checking whether dap remote testing should be enabled
configure:3254: result: no
configure:3357: checking whether netCDF extra tests should be run (developers
only)
configure:3365: result: no
configure:3384: checking whether documentation is to be installed
configure:3392: result: no
configure:3404: checking whether Fortran compiler(s) should be tested during
configure
configure:3412: result: yes
configure:3416: checking whether FFIO will be used
configure:3424: result: no
configure:3440: checking whether to skip C++, F77, or F90 APIs if compiler is
broken
configure:3448: result: yes
configure:3452: checking whether only the C library is desired
configure:3460: result: no
configure:3479: checking whether examples should be built
configure:3487: result: yes
configure:3491: checking whether F77 API is desired
configure:3500: result: yes
configure:3505: checking whether F90 API is desired
configure:3515: result: yes
configure:3519: checking whether fortran type sizes should be checked
configure:3527: result: yes
configure:3533: checking whether C API is desired
configure:3541: result: yes
configure:3548: checking where to get netCDF C-only library for separate
fortran libraries
configure:3564: result:
configure:3579: checking whether CXX API is desired
configure:3588: result: yes
configure:3599: checking whether v2 netCDF API should be built
configure:3607: result: yes
configure:3626: checking whether the ncgen/ncdump should be built
configure:3635: result: yes
configure:3647: checking whether large file (> 2GB) tests should be run
configure:3655: result: no
configure:3674: checking whether benchmaks should be run (experimental)
configure:3682: result: no
configure:3694: checking whether extreme numbers should be used in tests
configure:3709: result: yes
configure:3723: checking where to put large temp files if large file tests are
run
configure:3732: result: .
configure:3743: checking whether a win32 DLL is desired
configure:3751: result: no
configure:3775: checking whether separate fortran libs are desired
configure:3784: result: no
configure:3854: finding C compiler
configure:3911: checking for xlc
configure:3941: result: no
configure:3911: checking for cc
configure:3927: found /usr/bin/cc
configure:3938: result: cc
configure:3974: checking for C compiler version
configure:3982: cc --version >&5
cc (Ubuntu 4.3.3-5ubuntu4) 4.3.3
Copyright (C) 2008 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:3986: $? = 0
configure:3993: cc -v >&5
Using built-in specs.
Target: i486-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 4.3.3-5ubuntu4'
--with-bugurl=file:///usr/share/doc/gcc-4.3/README.Bugs
--enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --enable-shared
--with-system-zlib --libexecdir=/usr/lib --without-included-gettext
--enable-threads=posix --enable-nls --with-gxx-include-dir=/usr/include/c++/4.3
--program-suffix=-4.3 --enable-clocale=gnu --enable-libstdcxx-debug
--enable-objc-gc --enable-mpfr --enable-targets=all --with-tune=generic
--enable-checking=release --build=i486-linux-gnu --host=i486-linux-gnu
--target=i486-linux-gnu
Thread model: posix
gcc version 4.3.3 (Ubuntu 4.3.3-5ubuntu4)
configure:3997: $? = 0
configure:4004: cc -V >&5
cc: '-V' option must have argument
configure:4008: $? = 1
configure:4031: checking for C compiler default output file name
configure:4053: cc conftest.c >&5
configure:4057: $? = 0
configure:4095: result: a.out
configure:4112: checking whether the C compiler works
configure:4122: ./a.out
configure:4126: $? = 0
configure:4143: result: yes
configure:4150: checking whether we are cross compiling
configure:4152: result: no
configure:4155: checking for suffix of executables
configure:4162: cc -o conftest conftest.c >&5
configure:4166: $? = 0
configure:4190: result:
configure:4196: checking for suffix of object files
configure:4222: cc -c conftest.c >&5
configure:4226: $? = 0
configure:4249: result: o
configure:4253: checking whether we are using the GNU C compiler
configure:4282: cc -c conftest.c >&5
configure:4289: $? = 0
configure:4306: result: yes
configure:4315: checking whether cc accepts -g
configure:4345: cc -c -g conftest.c >&5
configure:4352: $? = 0
configure:4453: result: yes
configure:4470: checking for cc option to accept ISO C89
configure:4544: cc -c -g -O2 conftest.c >&5
configure:4551: $? = 0
configure:4574: result: none needed
configure:4603: checking for style of include used by make
configure:4631: result: GNU
configure:4656: checking dependency style of cc
configure:4747: result: gcc3
configure:4766: checking whether cc understands -c and -o together
configure:4798: cc -c conftest.c -o conftest2.o >&5
configure:4802: $? = 0
configure:4808: cc -c conftest.c -o conftest2.o >&5
configure:4812: $? = 0
configure:4867: result: yes
configure:4894: checking for an ANSI C-conforming const
configure:4969: cc -c -g -O2 conftest.c >&5
configure:4976: $? = 0
configure:4991: result: yes
configure:5022: finding Fortran compiler (will not be used if Fortran API is
not desired)
configure:5361: checking for xlf90
configure:5391: result: no
configure:5361: checking for fort
configure:5391: result: no
configure:5361: checking for xlf95
configure:5391: result: no
configure:5361: checking for ifort
configure:5391: result: no
configure:5361: checking for ifc
configure:5391: result: no
configure:5361: checking for efc
configure:5391: result: no
configure:5361: checking for pgf95
configure:5391: result: no
configure:5361: checking for lf95
configure:5391: result: no
configure:5361: checking for g95
configure:5391: result: no
configure:5361: checking for gfortran
configure:5377: found /usr/bin/gfortran
configure:5388: result: gfortran
configure:5418: checking for Fortran compiler version
configure:5426: gfortran --version >&5
GNU Fortran (Ubuntu 4.3.3-5ubuntu4) 4.3.3
Copyright (C) 2008 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:5430: $? = 0
configure:5437: gfortran -v >&5
Using built-in specs.
Target: i486-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 4.3.3-5ubuntu4'
--with-bugurl=file:///usr/share/doc/gcc-4.3/README.Bugs
--enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --enable-shared
--with-system-zlib --libexecdir=/usr/lib --without-included-gettext
--enable-threads=posix --enable-nls --with-gxx-include-dir=/usr/include/c++/4.3
--program-suffix=-4.3 --enable-clocale=gnu --enable-libstdcxx-debug
--enable-objc-gc --enable-mpfr --enable-targets=all --with-tune=generic
--enable-checking=release --build=i486-linux-gnu --host=i486-linux-gnu
--target=i486-linux-gnu
Thread model: posix
gcc version 4.3.3 (Ubuntu 4.3.3-5ubuntu4)
configure:5441: $? = 0
configure:5448: gfortran -V >&5
gfortran: '-V' option must have argument
configure:5452: $? = 1
configure:5460: checking whether we are using the GNU Fortran compiler
configure:5479: gfortran -c conftest.F >&5
configure:5486: $? = 0
configure:5503: result: yes
configure:5509: checking whether gfortran accepts -g
configure:5526: gfortran -c -g conftest.f >&5
configure:5533: $? = 0
configure:5549: result: yes
configure:5642: checking for xlf
configure:5672: result: no
configure:5642: checking for fort
configure:5672: result: no
configure:5642: checking for xlf95
configure:5672: result: no
configure:5642: checking for ifort
configure:5672: result: no
configure:5642: checking for ifc
configure:5672: result: no
configure:5642: checking for efc
configure:5672: result: no
configure:5642: checking for pgf77
configure:5672: result: no
configure:5642: checking for lf95
configure:5672: result: no
configure:5642: checking for g95
configure:5672: result: no
configure:5642: checking for gfortran
configure:5658: found /usr/bin/gfortran
configure:5669: result: gfortran
configure:5699: checking for Fortran 77 compiler version
configure:5707: gfortran --version >&5
GNU Fortran (Ubuntu 4.3.3-5ubuntu4) 4.3.3
Copyright (C) 2008 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:5711: $? = 0
configure:5718: gfortran -v >&5
Using built-in specs.
Target: i486-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 4.3.3-5ubuntu4'
--with-bugurl=file:///usr/share/doc/gcc-4.3/README.Bugs
--enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --enable-shared
--with-system-zlib --libexecdir=/usr/lib --without-included-gettext
--enable-threads=posix --enable-nls --with-gxx-include-dir=/usr/include/c++/4.3
--program-suffix=-4.3 --enable-clocale=gnu --enable-libstdcxx-debug
--enable-objc-gc --enable-mpfr --enable-targets=all --with-tune=generic
--enable-checking=release --build=i486-linux-gnu --host=i486-linux-gnu
--target=i486-linux-gnu
Thread model: posix
gcc version 4.3.3 (Ubuntu 4.3.3-5ubuntu4)
configure:5722: $? = 0
configure:5729: gfortran -V >&5
gfortran: '-V' option must have argument
configure:5733: $? = 1
configure:5741: checking whether we are using the GNU Fortran 77 compiler
configure:5760: gfortran -c conftest.F >&5
configure:5767: $? = 0
configure:5784: result: yes
configure:5790: checking whether gfortran accepts -g
configure:5807: gfortran -c -g conftest.f >&5
configure:5814: $? = 0
configure:5830: result: yes
configure:5878: setting up Fortran 90
configure:5897: checking for Fortran flag to compile .f90 files
configure:5919: gfortran -c -g -O2 conftest.f90 >&5
configure:5926: $? = 0
configure:5945: result: none
configure:5975: checking fortran 90 modules inclusion flag
configure:6006: gfortran -c -g -O2 conftest.f90 >&5
configure:6013: $? = 0
configure:6046: gfortran -c -g -O2 -Itmpdir_0 conftest.f90 >&5
configure:6053: $? = 0
configure:6084: result: -I
configure:6096: checking if Fortran compiler can handle Fortran-90
configure:6104: gfortran -g -O2 conftest.f90
configure:6107: $? = 0
configure:6121: result: yes
configure:6130: finding C++ compiler (will not be used if C++ API is not
desired)
configure:6198: checking for cl
configure:6228: result: no
configure:6198: checking for KCC
configure:6228: result: no
configure:6198: checking for CC
configure:6228: result: no
configure:6198: checking for cxx
configure:6228: result: no
configure:6198: checking for cc++
configure:6228: result: no
configure:6198: checking for xlC
configure:6228: result: no
configure:6198: checking for aCC
configure:6228: result: no
configure:6198: checking for c++
configure:6214: found /usr/bin/c++
configure:6225: result: c++
configure:6256: checking for C++ compiler version
configure:6264: c++ --version >&5
c++ (Ubuntu 4.3.3-5ubuntu4) 4.3.3
Copyright (C) 2008 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:6268: $? = 0
configure:6275: c++ -v >&5
Using built-in specs.
Target: i486-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 4.3.3-5ubuntu4'
--with-bugurl=file:///usr/share/doc/gcc-4.3/README.Bugs
--enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --enable-shared
--with-system-zlib --libexecdir=/usr/lib --without-included-gettext
--enable-threads=posix --enable-nls --with-gxx-include-dir=/usr/include/c++/4.3
--program-suffix=-4.3 --enable-clocale=gnu --enable-libstdcxx-debug
--enable-objc-gc --enable-mpfr --enable-targets=all --with-tune=generic
--enable-checking=release --build=i486-linux-gnu --host=i486-linux-gnu
--target=i486-linux-gnu
Thread model: posix
gcc version 4.3.3 (Ubuntu 4.3.3-5ubuntu4)
configure:6279: $? = 0
configure:6286: c++ -V >&5
c++: '-V' option must have argument
configure:6290: $? = 1
configure:6293: checking whether we are using the GNU C++ compiler
configure:6322: c++ -c conftest.cpp >&5
configure:6329: $? = 0
configure:6346: result: yes
configure:6355: checking whether c++ accepts -g
configure:6385: c++ -c -g conftest.cpp >&5
configure:6392: $? = 0
configure:6493: result: yes
configure:6518: checking dependency style of c++
configure:6609: result: gcc3
configure:6682: setting up libtool
configure:6711: checking for a sed that does not truncate output
configure:6777: result: /bin/sed
configure:6795: checking for grep that handles long lines and -e
configure:6855: result: /bin/grep
configure:6860: checking for egrep
configure:6924: result: /bin/grep -E
configure:6929: checking for fgrep
configure:6993: result: /bin/grep -F
configure:7028: checking for ld used by cc
configure:7095: result: /usr/bin/ld
configure:7104: checking if the linker (/usr/bin/ld) is GNU ld
configure:7119: result: yes
configure:7131: checking for BSD- or MS-compatible name lister (nm)
configure:7180: result: /usr/bin/nm -B
configure:7302: checking the name lister (/usr/bin/nm -B) interface
configure:7309: cc -c -g -O2 conftest.c >&5
configure:7312: /usr/bin/nm -B "conftest.o"
configure:7315: output
00000000 B some_variable
configure:7322: result: BSD nm
configure:7325: checking whether ln -s works
configure:7329: result: yes
configure:7337: checking the maximum length of command line arguments
configure:7457: result: 1572864
configure:7474: checking whether the shell understands some XSI constructs
configure:7484: result: yes
configure:7488: checking whether the shell understands "+="
configure:7494: result: yes
configure:7529: checking for /usr/bin/ld option to reload object files
configure:7536: result: -r
configure:7563: checking how to recognize dependent libraries
configure:7753: result: pass_all
configure:7813: checking for ar
configure:7829: found /usr/bin/ar
configure:7840: result: ar
configure:7922: checking for strip
configure:7938: found /usr/bin/strip
configure:7949: result: strip
configure:8025: checking for ranlib
configure:8041: found /usr/bin/ranlib
configure:8052: result: ranlib
configure:8146: checking command to parse /usr/bin/nm -B output from cc object
configure:8264: cc -c -g -O2 conftest.c >&5
configure:8267: $? = 0
configure:8271: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[
]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][
]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' \> conftest.nm
configure:8274: $? = 0
configure:8328: cc -o conftest -g -O2 conftest.c conftstm.o >&5
configure:8331: $? = 0
configure:8369: result: ok
configure:9255: checking how to run the C preprocessor
configure:9295: cc -E conftest.c
configure:9302: $? = 0
configure:9333: cc -E conftest.c
conftest.c:20:28: error: ac_nonexistent.h: No such file or directory
configure:9340: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.0.1"
| #define PACKAGE_STRING "netCDF 4.0.1"
| #define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
| #define PACKAGE "netcdf"
| #define VERSION "4.0.1"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_NETCDF4 1
| #define H5_USE_16_API 1
| #define CHUNK_CACHE_SIZE 32000000
| #define CHUNK_CACHE_NELEMS 1000
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define USE_RENAMEV3 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:9373: result: cc -E
configure:9402: cc -E conftest.c
configure:9409: $? = 0
configure:9440: cc -E conftest.c
conftest.c:20:28: error: ac_nonexistent.h: No such file or directory
configure:9447: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.0.1"
| #define PACKAGE_STRING "netCDF 4.0.1"
| #define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
| #define PACKAGE "netcdf"
| #define VERSION "4.0.1"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_NETCDF4 1
| #define H5_USE_16_API 1
| #define CHUNK_CACHE_SIZE 32000000
| #define CHUNK_CACHE_NELEMS 1000
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define USE_RENAMEV3 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:9485: checking for ANSI C header files
configure:9515: cc -c -g -O2 conftest.c >&5
configure:9522: $? = 0
configure:9621: cc -o conftest -g -O2 conftest.c >&5
configure:9625: $? = 0
configure:9631: ./conftest
configure:9635: $? = 0
configure:9653: result: yes
configure:9677: checking for sys/types.h
configure:9698: cc -c -g -O2 conftest.c >&5
configure:9705: $? = 0
configure:9722: result: yes
configure:9677: checking for sys/stat.h
configure:9698: cc -c -g -O2 conftest.c >&5
configure:9705: $? = 0
configure:9722: result: yes
configure:9677: checking for stdlib.h
configure:9698: cc -c -g -O2 conftest.c >&5
configure:9705: $? = 0
configure:9722: result: yes
configure:9677: checking for string.h
configure:9698: cc -c -g -O2 conftest.c >&5
configure:9705: $? = 0
configure:9722: result: yes
configure:9677: checking for memory.h
configure:9698: cc -c -g -O2 conftest.c >&5
configure:9705: $? = 0
configure:9722: result: yes
configure:9677: checking for strings.h
configure:9698: cc -c -g -O2 conftest.c >&5
configure:9705: $? = 0
configure:9722: result: yes
configure:9677: checking for inttypes.h
configure:9698: cc -c -g -O2 conftest.c >&5
configure:9705: $? = 0
configure:9722: result: yes
configure:9677: checking for stdint.h
configure:9698: cc -c -g -O2 conftest.c >&5
configure:9705: $? = 0
configure:9722: result: yes
configure:9677: checking for unistd.h
configure:9698: cc -c -g -O2 conftest.c >&5
configure:9705: $? = 0
configure:9722: result: yes
configure:9739: checking for dlfcn.h
configure:9760: cc -c -g -O2 conftest.c >&5
configure:9767: $? = 0
configure:9784: result: yes
configure:9914: checking for C++ compiler version
configure:9922: c++ --version >&5
c++ (Ubuntu 4.3.3-5ubuntu4) 4.3.3
Copyright (C) 2008 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:9926: $? = 0
configure:9933: c++ -v >&5
Using built-in specs.
Target: i486-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 4.3.3-5ubuntu4'
--with-bugurl=file:///usr/share/doc/gcc-4.3/README.Bugs
--enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --enable-shared
--with-system-zlib --libexecdir=/usr/lib --without-included-gettext
--enable-threads=posix --enable-nls --with-gxx-include-dir=/usr/include/c++/4.3
--program-suffix=-4.3 --enable-clocale=gnu --enable-libstdcxx-debug
--enable-objc-gc --enable-mpfr --enable-targets=all --with-tune=generic
--enable-checking=release --build=i486-linux-gnu --host=i486-linux-gnu
--target=i486-linux-gnu
Thread model: posix
gcc version 4.3.3 (Ubuntu 4.3.3-5ubuntu4)
configure:9937: $? = 0
configure:9944: c++ -V >&5
c++: '-V' option must have argument
configure:9948: $? = 1
configure:9951: checking whether we are using the GNU C++ compiler
configure:10004: result: yes
configure:10013: checking whether c++ accepts -g
configure:10151: result: yes
configure:10176: checking dependency style of c++
configure:10267: result: gcc3
configure:10290: checking how to run the C++ preprocessor
configure:10326: c++ -E conftest.cpp
configure:10333: $? = 0
configure:10364: c++ -E conftest.cpp
conftest.cpp:31:28: error: ac_nonexistent.h: No such file or directory
configure:10371: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.0.1"
| #define PACKAGE_STRING "netCDF 4.0.1"
| #define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
| #define PACKAGE "netcdf"
| #define VERSION "4.0.1"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_NETCDF4 1
| #define H5_USE_16_API 1
| #define CHUNK_CACHE_SIZE 32000000
| #define CHUNK_CACHE_NELEMS 1000
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define USE_RENAMEV3 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:10404: result: c++ -E
configure:10433: c++ -E conftest.cpp
configure:10440: $? = 0
configure:10471: c++ -E conftest.cpp
conftest.cpp:31:28: error: ac_nonexistent.h: No such file or directory
configure:10478: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.0.1"
| #define PACKAGE_STRING "netCDF 4.0.1"
| #define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
| #define PACKAGE "netcdf"
| #define VERSION "4.0.1"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_NETCDF4 1
| #define H5_USE_16_API 1
| #define CHUNK_CACHE_SIZE 32000000
| #define CHUNK_CACHE_NELEMS 1000
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define USE_RENAMEV3 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:10629: checking for Fortran 77 compiler version
configure:10637: gfortran --version >&5
GNU Fortran (Ubuntu 4.3.3-5ubuntu4) 4.3.3
Copyright (C) 2008 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:10641: $? = 0
configure:10648: gfortran -v >&5
Using built-in specs.
Target: i486-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 4.3.3-5ubuntu4'
--with-bugurl=file:///usr/share/doc/gcc-4.3/README.Bugs
--enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --enable-shared
--with-system-zlib --libexecdir=/usr/lib --without-included-gettext
--enable-threads=posix --enable-nls --with-gxx-include-dir=/usr/include/c++/4.3
--program-suffix=-4.3 --enable-clocale=gnu --enable-libstdcxx-debug
--enable-objc-gc --enable-mpfr --enable-targets=all --with-tune=generic
--enable-checking=release --build=i486-linux-gnu --host=i486-linux-gnu
--target=i486-linux-gnu
Thread model: posix
gcc version 4.3.3 (Ubuntu 4.3.3-5ubuntu4)
configure:10652: $? = 0
configure:10659: gfortran -V >&5
gfortran: '-V' option must have argument
configure:10663: $? = 1
configure:10671: checking whether we are using the GNU Fortran 77 compiler
configure:10714: result: yes
configure:10720: checking whether gfortran accepts -g
configure:10760: result: yes
configure:10907: checking for Fortran compiler version
configure:10915: gfortran --version >&5
GNU Fortran (Ubuntu 4.3.3-5ubuntu4) 4.3.3
Copyright (C) 2008 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:10919: $? = 0
configure:10926: gfortran -v >&5
Using built-in specs.
Target: i486-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 4.3.3-5ubuntu4'
--with-bugurl=file:///usr/share/doc/gcc-4.3/README.Bugs
--enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --enable-shared
--with-system-zlib --libexecdir=/usr/lib --without-included-gettext
--enable-threads=posix --enable-nls --with-gxx-include-dir=/usr/include/c++/4.3
--program-suffix=-4.3 --enable-clocale=gnu --enable-libstdcxx-debug
--enable-objc-gc --enable-mpfr --enable-targets=all --with-tune=generic
--enable-checking=release --build=i486-linux-gnu --host=i486-linux-gnu
--target=i486-linux-gnu
Thread model: posix
gcc version 4.3.3 (Ubuntu 4.3.3-5ubuntu4)
configure:10930: $? = 0
configure:10937: gfortran -V >&5
gfortran: '-V' option must have argument
configure:10941: $? = 1
configure:10949: checking whether we are using the GNU Fortran compiler
configure:10992: result: yes
configure:10998: checking whether gfortran accepts -g
configure:11038: result: yes
configure:11210: checking for objdir
configure:11225: result: .libs
configure:11521: checking if cc supports -fno-rtti -fno-exceptions
configure:11539: cc -c -g -O2 -fno-rtti -fno-exceptions conftest.c >&5
cc1: warning: command line option "-fno-rtti" is valid for C++/ObjC++ but not
for C
configure:11543: $? = 0
configure:11556: result: no
configure:11576: checking for cc option to produce PIC
configure:11833: result: -fPIC -DPIC
configure:11845: checking if cc PIC flag -fPIC -DPIC works
configure:11863: cc -c -g -O2 -fPIC -DPIC -DPIC conftest.c >&5
configure:11867: $? = 0
configure:11880: result: yes
configure:11904: checking if cc static flag -static works
configure:11932: result: yes
configure:11947: checking if cc supports -c -o file.o
configure:11968: cc -c -g -O2 -o out/conftest2.o conftest.c >&5
configure:11972: $? = 0
configure:11994: result: yes
configure:12002: checking if cc supports -c -o file.o
configure:12049: result: yes
configure:12082: checking whether the cc linker (/usr/bin/ld) supports shared
libraries
configure:13148: result: yes
configure:13387: checking dynamic linker characteristics
configure:13830: cc -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.c >&5
configure:13837: $? = 0
configure:14070: result: GNU/Linux ld.so
configure:14172: checking how to hardcode library paths into programs
configure:14197: result: immediate
configure:15038: checking whether stripping libraries is possible
configure:15043: result: yes
configure:15078: checking if libtool supports shared libraries
configure:15080: result: yes
configure:15083: checking whether to build shared libraries
configure:15104: result: no
configure:15107: checking whether to build static libraries
configure:15111: result: yes
configure:15261: checking for ld used by c++
configure:15328: result: /usr/bin/ld
configure:15337: checking if the linker (/usr/bin/ld) is GNU ld
configure:15352: result: yes
configure:15407: checking whether the c++ linker (/usr/bin/ld) supports shared
libraries
configure:16377: result: yes
configure:16405: c++ -c -g -O2 conftest.cpp >&5
configure:16408: $? = 0
configure:16590: checking for c++ option to produce PIC
configure:16899: result: -fPIC -DPIC
configure:16908: checking if c++ PIC flag -fPIC -DPIC works
configure:16926: c++ -c -g -O2 -fPIC -DPIC -DPIC conftest.cpp >&5
configure:16930: $? = 0
configure:16943: result: yes
configure:16964: checking if c++ static flag -static works
configure:16992: result: yes
configure:17004: checking if c++ supports -c -o file.o
configure:17025: c++ -c -g -O2 -o out/conftest2.o conftest.cpp >&5
configure:17029: $? = 0
configure:17051: result: yes
configure:17056: checking if c++ supports -c -o file.o
configure:17103: result: yes
configure:17133: checking whether the c++ linker (/usr/bin/ld) supports shared
libraries
configure:17159: result: yes
configure:17296: checking dynamic linker characteristics
configure:17687: c++ -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.cpp >&5
configure:17694: $? = 0
configure:17927: result: GNU/Linux ld.so
configure:17978: checking how to hardcode library paths into programs
configure:18003: result: immediate
configure:18144: checking if libtool supports shared libraries
configure:18146: result: yes
configure:18149: checking whether to build shared libraries
configure:18169: result: no
configure:18172: checking whether to build static libraries
configure:18176: result: yes
configure:18190: checking for gfortran option to produce PIC
configure:18447: result: -fPIC
configure:18456: checking if gfortran PIC flag -fPIC works
configure:18474: gfortran -c -g -O2 -fPIC conftest.f >&5
configure:18478: $? = 0
configure:18491: result: yes
configure:18512: checking if gfortran static flag -static works
configure:18540: result: yes
configure:18552: checking if gfortran supports -c -o file.o
configure:18573: gfortran -c -g -O2 -o out/conftest2.o conftest.f >&5
configure:18577: $? = 0
configure:18599: result: yes
configure:18604: checking if gfortran supports -c -o file.o
configure:18651: result: yes
configure:18681: checking whether the gfortran linker (/usr/bin/ld) supports
shared libraries
configure:19727: result: yes
configure:19864: checking dynamic linker characteristics
configure:20245: gfortran -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.f
>&5
configure:20252: $? = 0
configure:20485: result: GNU/Linux ld.so
configure:20536: checking how to hardcode library paths into programs
configure:20561: result: immediate
configure:20697: checking if libtool supports shared libraries
configure:20699: result: yes
configure:20702: checking whether to build shared libraries
configure:20722: result: no
configure:20725: checking whether to build static libraries
configure:20729: result: yes
configure:20755: gfortran -c -g -O2 conftest.f90 >&5
configure:20758: $? = 0
configure:20868: checking for gfortran option to produce PIC
configure:21125: result: -fPIC
configure:21134: checking if gfortran PIC flag -fPIC works
configure:21152: gfortran -c -g -O2 -fPIC conftest.f90 >&5
configure:21156: $? = 0
configure:21169: result: yes
configure:21190: checking if gfortran static flag -static works
configure:21218: result: yes
configure:21230: checking if gfortran supports -c -o file.o
configure:21251: gfortran -c -g -O2 -o out/conftest2.o conftest.f90 >&5
configure:21255: $? = 0
configure:21277: result: yes
configure:21282: checking if gfortran supports -c -o file.o
configure:21329: result: yes
configure:21359: checking whether the gfortran linker (/usr/bin/ld) supports
shared libraries
configure:22405: result: yes
configure:22542: checking dynamic linker characteristics
configure:22923: gfortran -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.f90
>&5
configure:22930: $? = 0
configure:23163: result: GNU/Linux ld.so
configure:23214: checking how to hardcode library paths into programs
configure:23239: result: immediate
configure:23287: finding other utilities
configure:23304: checking for a BSD-compatible install
configure:23372: result: /usr/bin/install -c
configure:23385: trying to set fortran flags for this platform
configure:23503: checking if we need to set _LARGE_FILES despite results of
previous tests
configure:23534: result: _LARGE_FILES=
configure:23544: checking for special C compiler options needed for large files
configure:23639: result: no
configure:23645: checking for _FILE_OFFSET_BITS value needed for large files
configure:23680: cc -c -g -O2 conftest.c >&5
conftest.c:39: warning: left shift count >= width of type
conftest.c:39: warning: left shift count >= width of type
conftest.c:41: error: size of array 'off_t_is_large' is negative
configure:23687: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.0.1"
| #define PACKAGE_STRING "netCDF 4.0.1"
| #define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
| #define PACKAGE "netcdf"
| #define VERSION "4.0.1"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_NETCDF4 1
| #define H5_USE_16_API 1
| #define CHUNK_CACHE_SIZE 32000000
| #define CHUNK_CACHE_NELEMS 1000
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define USE_RENAMEV3 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define pgiFortran 1
| /* end confdefs.h. */
| #include <sys/types.h>
| /* Check that off_t can represent 2**63 - 1 correctly.
| We can't simply define LARGE_OFF_T to be 9223372036854775807,
| since some C++ compilers masquerading as C compilers
| incorrectly reject 9223372036854775807. */
| #define LARGE_OFF_T (((off_t) 1 << 62) - 1 + ((off_t) 1 << 62))
| int off_t_is_large[(LARGE_OFF_T % 2147483629 == 721
| && LARGE_OFF_T % 2147483647 == 1)
| ? 1 : -1];
| int
| main ()
| {
|
| ;
| return 0;
| }
configure:23731: cc -c -g -O2 conftest.c >&5
configure:23738: $? = 0
configure:23756: result: 64
configure:23894: displaying some results
configure:23900: checking CPPFLAGS
configure:23902: result:
configure:23904: checking CC CFLAGS
configure:23906: result: cc -g -O2
configure:23909: checking type cc
configure:23911: result: cc is /usr/bin/cc
configure:23914: checking CXX
configure:23917: result: c++
configure:23919: checking CXXFLAGS
configure:23921: result: -g -O2
configure:23924: checking type c++
configure:23926: result: c++ is /usr/bin/c++
configure:23933: checking FC
configure:23936: result: gfortran
configure:23938: checking FFLAGS
configure:23940: result: -g -O2
configure:23943: checking type gfortran
configure:23945: result: gfortran is /usr/bin/gfortran
configure:23952: checking F90
configure:23955: result: gfortran
configure:23957: checking FCFLAGS
configure:23959: result: -g -O2
configure:23962: checking type gfortran
configure:23964: result: gfortran is /usr/bin/gfortran
configure:23971: checking AR
configure:23974: result: ar
configure:23976: checking AR_FLAGS
configure:23978: result: cru
configure:23981: checking type ar
configure:23983: result: ar is /usr/bin/ar
configure:23990: checking NM
configure:23993: result: /usr/bin/nm -B
configure:23995: checking NMFLAGS
configure:23997: result:
configure:24069: checking for /usr/bin/nm
configure:24096: result: /usr/bin/nm -B
configure:24109: checking nm flags
configure:24114: result:
configure:24126: checking for C-equivalent to Fortran routine "SUB"
configure:24133: gfortran -c -g -O2 conftest.f
configure:24136: $? = 0
configure:24148: result: sub_
configure:24170: checking for Fortran "byte"
configure:24178: gfortran -c -g -O2 conftest.f
configure:24181: $? = 0
configure:24183: result: yes
configure:24201: checking for Fortran "integer*2"
configure:24209: gfortran -c -g -O2 conftest.f
configure:24212: $? = 0
configure:24214: result: yes
configure:24241: checking if Fortran "byte" is C "signed char"
configure:24251: cc -c -g -O2 conftest.c
conftest.c: In function 'sub_':
conftest.c:4: warning: incompatible implicit declaration of built-in function
'exit'
configure:24254: $? = 0
configure:24257: gfortran -g -O2 -c conftestf.f
configure:24260: $? = 0
configure:24263: gfortran -o conftest -g -O2 conftestf.o conftest.o
configure:24266: $? = 0
configure:24269: ./conftest
configure:24272: $? = 0
configure:24274: result: yes
configure:24314: checking if Fortran "byte" is C "short"
configure:24324: cc -c -g -O2 conftest.c
conftest.c: In function 'sub_':
conftest.c:4: warning: incompatible implicit declaration of built-in function
'exit'
configure:24327: $? = 0
configure:24330: gfortran -g -O2 -c conftestf.f
configure:24333: $? = 0
configure:24336: gfortran -o conftest -g -O2 conftestf.o conftest.o
configure:24339: $? = 0
configure:24342: ./conftest
configure:24345: $? = 1
configure:24358: result: no
configure:24387: checking if Fortran "byte" is C "int"
configure:24397: cc -c -g -O2 conftest.c
conftest.c: In function 'sub_':
conftest.c:4: warning: incompatible implicit declaration of built-in function
'exit'
configure:24400: $? = 0
configure:24403: gfortran -g -O2 -c conftestf.f
configure:24406: $? = 0
configure:24409: gfortran -o conftest -g -O2 conftestf.o conftest.o
configure:24412: $? = 0
configure:24415: ./conftest
configure:24418: $? = 1
configure:24431: result: no
configure:24460: checking if Fortran "byte" is C "long"
configure:24470: cc -c -g -O2 conftest.c
conftest.c: In function 'sub_':
conftest.c:4: warning: incompatible implicit declaration of built-in function
'exit'
configure:24473: $? = 0
configure:24476: gfortran -g -O2 -c conftestf.f
configure:24479: $? = 0
configure:24482: gfortran -o conftest -g -O2 conftestf.o conftest.o
configure:24485: $? = 0
configure:24488: ./conftest
configure:24491: $? = 1
configure:24504: result: no
configure:24537: checking if Fortran "integer*2" is C "short"
configure:24547: cc -c -g -O2 conftest.c
conftest.c: In function 'sub_':
conftest.c:4: warning: incompatible implicit declaration of built-in function
'exit'
configure:24550: $? = 0
configure:24553: gfortran -g -O2 -c conftestf.f
configure:24556: $? = 0
configure:24559: gfortran -o conftest -g -O2 conftestf.o conftest.o
configure:24562: $? = 0
configure:24565: ./conftest
configure:24568: $? = 0
configure:24570: result: yes
configure:24610: checking if Fortran "integer*2" is C "int"
configure:24620: cc -c -g -O2 conftest.c
conftest.c: In function 'sub_':
conftest.c:4: warning: incompatible implicit declaration of built-in function
'exit'
configure:24623: $? = 0
configure:24626: gfortran -g -O2 -c conftestf.f
configure:24629: $? = 0
configure:24632: gfortran -o conftest -g -O2 conftestf.o conftest.o
configure:24635: $? = 0
configure:24638: ./conftest
configure:24641: $? = 1
configure:24654: result: no
configure:24683: checking if Fortran "integer*2" is C "long"
configure:24693: cc -c -g -O2 conftest.c
conftest.c: In function 'sub_':
conftest.c:4: warning: incompatible implicit declaration of built-in function
'exit'
configure:24696: $? = 0
configure:24699: gfortran -g -O2 -c conftestf.f
configure:24702: $? = 0
configure:24705: gfortran -o conftest -g -O2 conftestf.o conftest.o
configure:24708: $? = 0
configure:24711: ./conftest
configure:24714: $? = 1
configure:24727: result: no
configure:24758: checking if Fortran "integer" is C "int"
configure:24768: cc -c -g -O2 conftest.c
conftest.c: In function 'sub_':
conftest.c:4: warning: incompatible implicit declaration of built-in function
'exit'
configure:24771: $? = 0
configure:24774: gfortran -g -O2 -c conftestf.f
configure:24777: $? = 0
configure:24780: gfortran -o conftest -g -O2 conftestf.o conftest.o
configure:24783: $? = 0
configure:24786: ./conftest
configure:24789: $? = 0
configure:24791: result: yes
configure:24831: checking if Fortran "real" is C "float"
configure:24841: cc -c -g -O2 conftest.c
conftest.c: In function 'sub_':
conftest.c:4: warning: incompatible implicit declaration of built-in function
'exit'
configure:24844: $? = 0
configure:24847: gfortran -g -O2 -c conftestf.f
configure:24850: $? = 0
configure:24853: gfortran -o conftest -g -O2 conftestf.o conftest.o
configure:24856: $? = 0
configure:24859: ./conftest
configure:24862: $? = 0
configure:24864: result: yes
configure:24904: checking if Fortran "doubleprecision" is C "double"
configure:24914: cc -c -g -O2 conftest.c
conftest.c: In function 'sub_':
conftest.c:4: warning: incompatible implicit declaration of built-in function
'exit'
configure:24917: $? = 0
configure:24920: gfortran -g -O2 -c conftestf.f
configure:24923: $? = 0
configure:24926: gfortran -o conftest -g -O2 conftestf.o conftest.o
configure:24929: $? = 0
configure:24932: ./conftest
configure:24935: $? = 0
configure:24937: result: yes
configure:24971: checking for Fortran-equivalent to netCDF "byte"
configure:24979: gfortran -c -g -O2 conftest.f
configure:24982: $? = 0
configure:24993: result: byte
configure:24999: checking for Fortran-equivalent to netCDF "short"
configure:25007: gfortran -c -g -O2 conftest.f
configure:25010: $? = 0
configure:25021: result: integer*2
configure:25088: checking if Fortran 90 compiler capitalizes .mod filenames
configure:25095: gfortran conftest.f90 >&5
/usr/lib/gcc/i486-linux-gnu/4.3.3/libgfortranbegin.a(fmain.o): In function
`main':
(.text+0x35): undefined reference to `MAIN__'
collect2: ld returned 1 exit status
configure:25098: $? = 1
configure:25106: result: no
configure:25127: checking types, headers, and functions
configure:25131: checking for stdlib.h
configure:25136: result: yes
configure:25274: checking for sys/types.h
configure:25279: result: yes
configure:25432: checking locale.h usability
configure:25449: cc -c -g -O2 conftest.c >&5
configure:25456: $? = 0
configure:25470: result: yes
configure:25474: checking locale.h presence
configure:25489: cc -E conftest.c
configure:25496: $? = 0
configure:25510: result: yes
configure:25543: checking for locale.h
configure:25552: result: yes
configure:25568: checking for stdbool.h that conforms to C99
configure:25663: cc -c -g -O2 conftest.c >&5
configure:25670: $? = 0
configure:25685: result: yes
configure:25687: checking for _Bool
configure:25715: cc -c -g -O2 conftest.c >&5
configure:25722: $? = 0
configure:25749: cc -c -g -O2 conftest.c >&5
conftest.c: In function 'main':
conftest.c:80: error: expected expression before ')' token
configure:25756: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.0.1"
| #define PACKAGE_STRING "netCDF 4.0.1"
| #define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
| #define PACKAGE "netcdf"
| #define VERSION "4.0.1"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_NETCDF4 1
| #define H5_USE_16_API 1
| #define CHUNK_CACHE_SIZE 32000000
| #define CHUNK_CACHE_NELEMS 1000
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define USE_RENAMEV3 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define pgiFortran 1
| #define _FILE_OFFSET_BITS 64
| #define NF_INT1_T byte
| #define NF_INT2_T integer*2
| #define NF_INT1_IS_C_SIGNED_CHAR 1
| #define NF_INT2_IS_C_SHORT 1
| #define NF_INT_IS_C_INT 1
| #define NF_REAL_IS_C_FLOAT 1
| #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1
| #define NCBYTE_T byte
| #define NCSHORT_T integer*2
| #define HAVE_LOCALE_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((_Bool)))
| return 0;
| ;
| return 0;
| }
configure:25779: result: yes
configure:25806: checking for strlcat
configure:25862: cc -o conftest -g -O2 conftest.c >&5
/tmp/ccGa4rWr.o: In function `main':
/home/javier/javier/netcdf/netcdf3/conftest.c:80: undefined reference to
`strlcat'
collect2: ld returned 1 exit status
configure:25869: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.0.1"
| #define PACKAGE_STRING "netCDF 4.0.1"
| #define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
| #define PACKAGE "netcdf"
| #define VERSION "4.0.1"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_NETCDF4 1
| #define H5_USE_16_API 1
| #define CHUNK_CACHE_SIZE 32000000
| #define CHUNK_CACHE_NELEMS 1000
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define USE_RENAMEV3 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define pgiFortran 1
| #define _FILE_OFFSET_BITS 64
| #define NF_INT1_T byte
| #define NF_INT2_T integer*2
| #define NF_INT1_IS_C_SIGNED_CHAR 1
| #define NF_INT2_IS_C_SHORT 1
| #define NF_INT_IS_C_INT 1
| #define NF_REAL_IS_C_FLOAT 1
| #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1
| #define NCBYTE_T byte
| #define NCSHORT_T integer*2
| #define HAVE_LOCALE_H 1
| #define HAVE__BOOL 1
| #define HAVE_STDBOOL_H 1
| /* end confdefs.h. */
| /* Define strlcat to an innocuous variant, in case <limits.h> declares
strlcat.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define strlcat innocuous_strlcat
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char strlcat (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef strlcat
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char strlcat ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub_strlcat || defined __stub___strlcat
| choke me
| #endif
|
| int
| main ()
| {
| return strlcat ();
| ;
| return 0;
| }
configure:25891: result: no
configure:25806: checking for strerror
configure:25862: cc -o conftest -g -O2 conftest.c >&5
configure:25869: $? = 0
configure:25891: result: yes
configure:25806: checking for snprintf
configure:25862: cc -o conftest -g -O2 conftest.c >&5
conftest.c:70: warning: conflicting types for built-in function 'snprintf'
configure:25869: $? = 0
configure:25891: result: yes
configure:25904: checking for working alloca.h
configure:25931: cc -o conftest -g -O2 conftest.c >&5
configure:25938: $? = 0
configure:25958: result: yes
configure:25968: checking for alloca
configure:26015: cc -o conftest -g -O2 conftest.c >&5
configure:26022: $? = 0
configure:26042: result: yes
configure:26278: checking whether isnan is declared
configure:26308: cc -c -g -O2 conftest.c >&5
configure:26315: $? = 0
configure:26330: result: yes
configure:26346: checking whether isinf is declared
configure:26376: cc -c -g -O2 conftest.c >&5
configure:26383: $? = 0
configure:26398: result: yes
configure:26414: checking whether isfinite is declared
configure:26444: cc -c -g -O2 conftest.c >&5
conftest.c: In function 'main':
conftest.c:58: error: 'isfinite' undeclared (first use in this function)
conftest.c:58: error: (Each undeclared identifier is reported only once
conftest.c:58: error: for each function it appears in.)
configure:26451: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.0.1"
| #define PACKAGE_STRING "netCDF 4.0.1"
| #define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
| #define PACKAGE "netcdf"
| #define VERSION "4.0.1"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_NETCDF4 1
| #define H5_USE_16_API 1
| #define CHUNK_CACHE_SIZE 32000000
| #define CHUNK_CACHE_NELEMS 1000
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define USE_RENAMEV3 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define pgiFortran 1
| #define _FILE_OFFSET_BITS 64
| #define NF_INT1_T byte
| #define NF_INT2_T integer*2
| #define NF_INT1_IS_C_SIGNED_CHAR 1
| #define NF_INT2_IS_C_SHORT 1
| #define NF_INT_IS_C_INT 1
| #define NF_REAL_IS_C_FLOAT 1
| #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1
| #define NCBYTE_T byte
| #define NCSHORT_T integer*2
| #define HAVE_LOCALE_H 1
| #define HAVE__BOOL 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STRERROR 1
| #define HAVE_SNPRINTF 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISINF 1
| /* end confdefs.h. */
| #include <math.h>
|
| int
| main ()
| {
| #ifndef isfinite
| (void) isfinite;
| #endif
|
| ;
| return 0;
| }
configure:26466: result: no
configure:26482: checking whether signbit is declared
configure:26512: cc -c -g -O2 conftest.c >&5
conftest.c: In function 'main':
conftest.c:59: error: 'signbit' undeclared (first use in this function)
conftest.c:59: error: (Each undeclared identifier is reported only once
conftest.c:59: error: for each function it appears in.)
configure:26519: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.0.1"
| #define PACKAGE_STRING "netCDF 4.0.1"
| #define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
| #define PACKAGE "netcdf"
| #define VERSION "4.0.1"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_NETCDF4 1
| #define H5_USE_16_API 1
| #define CHUNK_CACHE_SIZE 32000000
| #define CHUNK_CACHE_NELEMS 1000
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define USE_RENAMEV3 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define pgiFortran 1
| #define _FILE_OFFSET_BITS 64
| #define NF_INT1_T byte
| #define NF_INT2_T integer*2
| #define NF_INT1_IS_C_SIGNED_CHAR 1
| #define NF_INT2_IS_C_SHORT 1
| #define NF_INT_IS_C_INT 1
| #define NF_REAL_IS_C_FLOAT 1
| #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1
| #define NCBYTE_T byte
| #define NCSHORT_T integer*2
| #define HAVE_LOCALE_H 1
| #define HAVE__BOOL 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STRERROR 1
| #define HAVE_SNPRINTF 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISFINITE 0
| /* end confdefs.h. */
| #include <math.h>
|
| int
| main ()
| {
| #ifndef signbit
| (void) signbit;
| #endif
|
| ;
| return 0;
| }
configure:26534: result: no
configure:26558: checking for long long int
configure:26605: cc -o conftest -g -O2 conftest.c >&5
configure:26612: $? = 0
configure:26659: cc -o conftest -g -O2 conftest.c >&5
configure:26663: $? = 0
configure:26669: ./conftest
configure:26673: $? = 0
configure:26700: result: yes
configure:26711: checking for unsigned long long int
configure:26758: cc -o conftest -g -O2 conftest.c >&5
configure:26765: $? = 0
configure:26785: result: yes
configure:26802: checking for struct stat.st_blksize
configure:26830: cc -c -g -O2 conftest.c >&5
configure:26837: $? = 0
configure:26895: result: yes
configure:26912: checking for IEEE floating point format
configure:26960: cc -o conftest -g -O2 conftest.c >&5
configure:26964: $? = 0
configure:26970: ./conftest
configure:26974: $? = 0
configure:26990: result: yes
configure:27000: checking for size_t
configure:27028: cc -c -g -O2 conftest.c >&5
configure:27035: $? = 0
configure:27062: cc -c -g -O2 conftest.c >&5
conftest.c: In function 'main':
conftest.c:94: error: expected expression before ')' token
configure:27069: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.0.1"
| #define PACKAGE_STRING "netCDF 4.0.1"
| #define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
| #define PACKAGE "netcdf"
| #define VERSION "4.0.1"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_NETCDF4 1
| #define H5_USE_16_API 1
| #define CHUNK_CACHE_SIZE 32000000
| #define CHUNK_CACHE_NELEMS 1000
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define USE_RENAMEV3 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define pgiFortran 1
| #define _FILE_OFFSET_BITS 64
| #define NF_INT1_T byte
| #define NF_INT2_T integer*2
| #define NF_INT1_IS_C_SIGNED_CHAR 1
| #define NF_INT2_IS_C_SHORT 1
| #define NF_INT_IS_C_INT 1
| #define NF_REAL_IS_C_FLOAT 1
| #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1
| #define NCBYTE_T byte
| #define NCSHORT_T integer*2
| #define HAVE_LOCALE_H 1
| #define HAVE__BOOL 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STRERROR 1
| #define HAVE_SNPRINTF 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISFINITE 0
| #define HAVE_DECL_SIGNBIT 0
| #define HAVE_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_ST_BLKSIZE 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((size_t)))
| return 0;
| ;
| return 0;
| }
configure:27092: result: yes
configure:27104: checking for off_t
configure:27132: cc -c -g -O2 conftest.c >&5
configure:27139: $? = 0
configure:27166: cc -c -g -O2 conftest.c >&5
conftest.c: In function 'main':
conftest.c:94: error: expected expression before ')' token
configure:27173: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.0.1"
| #define PACKAGE_STRING "netCDF 4.0.1"
| #define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
| #define PACKAGE "netcdf"
| #define VERSION "4.0.1"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_NETCDF4 1
| #define H5_USE_16_API 1
| #define CHUNK_CACHE_SIZE 32000000
| #define CHUNK_CACHE_NELEMS 1000
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define USE_RENAMEV3 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define pgiFortran 1
| #define _FILE_OFFSET_BITS 64
| #define NF_INT1_T byte
| #define NF_INT2_T integer*2
| #define NF_INT1_IS_C_SIGNED_CHAR 1
| #define NF_INT2_IS_C_SHORT 1
| #define NF_INT_IS_C_INT 1
| #define NF_REAL_IS_C_FLOAT 1
| #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1
| #define NCBYTE_T byte
| #define NCSHORT_T integer*2
| #define HAVE_LOCALE_H 1
| #define HAVE__BOOL 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STRERROR 1
| #define HAVE_SNPRINTF 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISFINITE 0
| #define HAVE_DECL_SIGNBIT 0
| #define HAVE_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_ST_BLKSIZE 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((off_t)))
| return 0;
| ;
| return 0;
| }
configure:27196: result: yes
configure:27208: checking for ssize_t
configure:27236: cc -c -g -O2 conftest.c >&5
configure:27243: $? = 0
configure:27270: cc -c -g -O2 conftest.c >&5
conftest.c: In function 'main':
conftest.c:94: error: expected expression before ')' token
configure:27277: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.0.1"
| #define PACKAGE_STRING "netCDF 4.0.1"
| #define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
| #define PACKAGE "netcdf"
| #define VERSION "4.0.1"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_NETCDF4 1
| #define H5_USE_16_API 1
| #define CHUNK_CACHE_SIZE 32000000
| #define CHUNK_CACHE_NELEMS 1000
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define USE_RENAMEV3 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define pgiFortran 1
| #define _FILE_OFFSET_BITS 64
| #define NF_INT1_T byte
| #define NF_INT2_T integer*2
| #define NF_INT1_IS_C_SIGNED_CHAR 1
| #define NF_INT2_IS_C_SHORT 1
| #define NF_INT_IS_C_INT 1
| #define NF_REAL_IS_C_FLOAT 1
| #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1
| #define NCBYTE_T byte
| #define NCSHORT_T integer*2
| #define HAVE_LOCALE_H 1
| #define HAVE__BOOL 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STRERROR 1
| #define HAVE_SNPRINTF 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISFINITE 0
| #define HAVE_DECL_SIGNBIT 0
| #define HAVE_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_ST_BLKSIZE 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((ssize_t)))
| return 0;
| ;
| return 0;
| }
configure:27300: result: yes
configure:27310: checking for ptrdiff_t
configure:27338: cc -c -g -O2 conftest.c >&5
configure:27345: $? = 0
configure:27372: cc -c -g -O2 conftest.c >&5
conftest.c: In function 'main':
conftest.c:95: error: expected expression before ')' token
configure:27379: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.0.1"
| #define PACKAGE_STRING "netCDF 4.0.1"
| #define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
| #define PACKAGE "netcdf"
| #define VERSION "4.0.1"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_NETCDF4 1
| #define H5_USE_16_API 1
| #define CHUNK_CACHE_SIZE 32000000
| #define CHUNK_CACHE_NELEMS 1000
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define USE_RENAMEV3 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define pgiFortran 1
| #define _FILE_OFFSET_BITS 64
| #define NF_INT1_T byte
| #define NF_INT2_T integer*2
| #define NF_INT1_IS_C_SIGNED_CHAR 1
| #define NF_INT2_IS_C_SHORT 1
| #define NF_INT_IS_C_INT 1
| #define NF_REAL_IS_C_FLOAT 1
| #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1
| #define NCBYTE_T byte
| #define NCSHORT_T integer*2
| #define HAVE_LOCALE_H 1
| #define HAVE__BOOL 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STRERROR 1
| #define HAVE_SNPRINTF 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISFINITE 0
| #define HAVE_DECL_SIGNBIT 0
| #define HAVE_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_ST_BLKSIZE 1
| #define HAVE_SSIZE_T 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((ptrdiff_t)))
| return 0;
| ;
| return 0;
| }
configure:27402: result: yes
configure:27412: checking for uchar
configure:27440: cc -c -g -O2 conftest.c >&5
conftest.c: In function 'main':
conftest.c:96: error: 'uchar' undeclared (first use in this function)
conftest.c:96: error: (Each undeclared identifier is reported only once
conftest.c:96: error: for each function it appears in.)
configure:27447: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.0.1"
| #define PACKAGE_STRING "netCDF 4.0.1"
| #define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
| #define PACKAGE "netcdf"
| #define VERSION "4.0.1"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_NETCDF4 1
| #define H5_USE_16_API 1
| #define CHUNK_CACHE_SIZE 32000000
| #define CHUNK_CACHE_NELEMS 1000
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define USE_RENAMEV3 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define pgiFortran 1
| #define _FILE_OFFSET_BITS 64
| #define NF_INT1_T byte
| #define NF_INT2_T integer*2
| #define NF_INT1_IS_C_SIGNED_CHAR 1
| #define NF_INT2_IS_C_SHORT 1
| #define NF_INT_IS_C_INT 1
| #define NF_REAL_IS_C_FLOAT 1
| #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1
| #define NCBYTE_T byte
| #define NCSHORT_T integer*2
| #define HAVE_LOCALE_H 1
| #define HAVE__BOOL 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STRERROR 1
| #define HAVE_SNPRINTF 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISFINITE 0
| #define HAVE_DECL_SIGNBIT 0
| #define HAVE_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_ST_BLKSIZE 1
| #define HAVE_SSIZE_T 1
| #define HAVE_PTRDIFF_T 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof (uchar))
| return 0;
| ;
| return 0;
| }
configure:27504: result: no
configure:27519: checking whether char is unsigned
configure:27547: cc -c -g -O2 conftest.c >&5
configure:27554: $? = 0
configure:27569: result: no
configure:27579: checking whether byte ordering is bigendian
configure:27604: cc -c -g -O2 conftest.c >&5
conftest.c:61: error: expected '=', ',', ';', 'asm' or '__attribute__' before
'is'
configure:27611: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.0.1"
| #define PACKAGE_STRING "netCDF 4.0.1"
| #define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
| #define PACKAGE "netcdf"
| #define VERSION "4.0.1"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_NETCDF4 1
| #define H5_USE_16_API 1
| #define CHUNK_CACHE_SIZE 32000000
| #define CHUNK_CACHE_NELEMS 1000
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define USE_RENAMEV3 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define pgiFortran 1
| #define _FILE_OFFSET_BITS 64
| #define NF_INT1_T byte
| #define NF_INT2_T integer*2
| #define NF_INT1_IS_C_SIGNED_CHAR 1
| #define NF_INT2_IS_C_SHORT 1
| #define NF_INT_IS_C_INT 1
| #define NF_REAL_IS_C_FLOAT 1
| #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1
| #define NCBYTE_T byte
| #define NCSHORT_T integer*2
| #define HAVE_LOCALE_H 1
| #define HAVE__BOOL 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STRERROR 1
| #define HAVE_SNPRINTF 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISFINITE 0
| #define HAVE_DECL_SIGNBIT 0
| #define HAVE_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_ST_BLKSIZE 1
| #define HAVE_SSIZE_T 1
| #define HAVE_PTRDIFF_T 1
| /* end confdefs.h. */
| #if ! (defined __BIG_ENDIAN__ || defined __LITTLE_ENDIAN__)
| neither is defined;
| #endif
| typedef int dummy;
|
configure:27655: cc -c -g -O2 conftest.c >&5
configure:27662: $? = 0
configure:27694: cc -c -g -O2 conftest.c >&5
conftest.c: In function 'main':
conftest.c:67: error: 'not' undeclared (first use in this function)
conftest.c:67: error: (Each undeclared identifier is reported only once
conftest.c:67: error: for each function it appears in.)
conftest.c:67: error: expected ';' before 'big'
configure:27701: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.0.1"
| #define PACKAGE_STRING "netCDF 4.0.1"
| #define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
| #define PACKAGE "netcdf"
| #define VERSION "4.0.1"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_NETCDF4 1
| #define H5_USE_16_API 1
| #define CHUNK_CACHE_SIZE 32000000
| #define CHUNK_CACHE_NELEMS 1000
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define USE_RENAMEV3 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define pgiFortran 1
| #define _FILE_OFFSET_BITS 64
| #define NF_INT1_T byte
| #define NF_INT2_T integer*2
| #define NF_INT1_IS_C_SIGNED_CHAR 1
| #define NF_INT2_IS_C_SHORT 1
| #define NF_INT_IS_C_INT 1
| #define NF_REAL_IS_C_FLOAT 1
| #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1
| #define NCBYTE_T byte
| #define NCSHORT_T integer*2
| #define HAVE_LOCALE_H 1
| #define HAVE__BOOL 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STRERROR 1
| #define HAVE_SNPRINTF 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISFINITE 0
| #define HAVE_DECL_SIGNBIT 0
| #define HAVE_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_ST_BLKSIZE 1
| #define HAVE_SSIZE_T 1
| #define HAVE_PTRDIFF_T 1
| /* end confdefs.h. */
| #include <sys/types.h>
| #include <sys/param.h>
|
| int
| main ()
| {
| #if BYTE_ORDER != BIG_ENDIAN
| not big endian
| #endif
|
| ;
| return 0;
| }
configure:27953: result: no
configure:27977: checking size of short
configure:28280: cc -o conftest -g -O2 conftest.c >&5
configure:28284: $? = 0
configure:28290: ./conftest
configure:28294: $? = 0
configure:28318: result: 2
configure:28332: checking size of int
configure:28635: cc -o conftest -g -O2 conftest.c >&5
configure:28639: $? = 0
configure:28645: ./conftest
configure:28649: $? = 0
configure:28673: result: 4
configure:28687: checking size of long
configure:28990: cc -o conftest -g -O2 conftest.c >&5
configure:28994: $? = 0
configure:29000: ./conftest
configure:29004: $? = 0
configure:29028: result: 4
configure:29042: checking size of float
configure:29345: cc -o conftest -g -O2 conftest.c >&5
configure:29349: $? = 0
configure:29355: ./conftest
configure:29359: $? = 0
configure:29383: result: 4
configure:29397: checking size of double
configure:29700: cc -o conftest -g -O2 conftest.c >&5
configure:29704: $? = 0
configure:29710: ./conftest
configure:29714: $? = 0
configure:29738: result: 8
configure:29752: checking size of off_t
configure:30055: cc -o conftest -g -O2 conftest.c >&5
configure:30059: $? = 0
configure:30065: ./conftest
configure:30069: $? = 0
configure:30093: result: 8
configure:30107: checking size of size_t
configure:30410: cc -o conftest -g -O2 conftest.c >&5
configure:30414: $? = 0
configure:30420: ./conftest
configure:30424: $? = 0
configure:30448: result: 4
configure:30547: checking for manual-page index command
configure:30549: result:
configure:30560: checking what to call the output of the ftpbin target
configure:30569: result: binary-netcdf-4.0.1_gfortran_gfortran_c++.tar gfortran
c++
configure:30572: checking binary distribution directory
configure:30580: result: /home/ftp/pub/binary/dummy_system
configure:30626: checking hdf5.h usability
configure:30643: cc -c -g -O2 -I/usr/local/hdf5_20/include conftest.c >&5
configure:30650: $? = 0
configure:30664: result: yes
configure:30668: checking hdf5.h presence
configure:30683: cc -E -I/usr/local/hdf5_20/include conftest.c
configure:30690: $? = 0
configure:30704: result: yes
configure:30737: checking for hdf5.h
configure:30746: result: yes
configure:30765: checking for H5Fflush in -lhdf5
configure:30800: cc -o conftest -g -O2 -I/usr/local/hdf5_20/include
-L/usr/local/lib -L/usr/local/hdf5_20/lib conftest.c -lhdf5 -lm -lz -lhdf5 >&5
configure:30807: $? = 0
configure:30828: result: yes
configure:30855: checking for H5DSis_scale in -lhdf5_hl
configure:30890: cc -o conftest -g -O2 -I/usr/local/hdf5_20/include
-L/usr/local/lib -L/usr/local/hdf5_20/lib conftest.c -lhdf5_hl -lhdf5 -lm -lz
-lhdf5 >&5
configure:30897: $? = 0
configure:30918: result: yes
configure:30938: checking for H5Pget_fapl_mpiposix in -lhdf5
configure:30973: cc -o conftest -g -O2 -I/usr/local/hdf5_20/include
-L/usr/local/lib -L/usr/local/hdf5_20/lib conftest.c -lhdf5 -lhdf5_hl -lhdf5
-lm -lz -lhdf5 >&5
/tmp/ccSzRA9w.o: In function `main':
/home/javier/javier/netcdf/netcdf3/conftest.c:81: undefined reference to
`H5Pget_fapl_mpiposix'
collect2: ld returned 1 exit status
configure:30980: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.0.1"
| #define PACKAGE_STRING "netCDF 4.0.1"
| #define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
| #define PACKAGE "netcdf"
| #define VERSION "4.0.1"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_NETCDF4 1
| #define H5_USE_16_API 1
| #define CHUNK_CACHE_SIZE 32000000
| #define CHUNK_CACHE_NELEMS 1000
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define USE_RENAMEV3 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define pgiFortran 1
| #define _FILE_OFFSET_BITS 64
| #define NF_INT1_T byte
| #define NF_INT2_T integer*2
| #define NF_INT1_IS_C_SIGNED_CHAR 1
| #define NF_INT2_IS_C_SHORT 1
| #define NF_INT_IS_C_INT 1
| #define NF_REAL_IS_C_FLOAT 1
| #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1
| #define NCBYTE_T byte
| #define NCSHORT_T integer*2
| #define HAVE_LOCALE_H 1
| #define HAVE__BOOL 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STRERROR 1
| #define HAVE_SNPRINTF 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISFINITE 0
| #define HAVE_DECL_SIGNBIT 0
| #define HAVE_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_ST_BLKSIZE 1
| #define HAVE_SSIZE_T 1
| #define HAVE_PTRDIFF_T 1
| #define SIZEOF_SHORT 2
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 4
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_SIZE_T 4
| #define HAVE_HDF5_H 1
| #define HAVE_LIBHDF5 1
| #define HAVE_LIBHDF5_HL 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char H5Pget_fapl_mpiposix ();
| int
| main ()
| {
| return H5Pget_fapl_mpiposix ();
| ;
| return 0;
| }
configure:31001: result: no
configure:31016: checking for H5Pget_fapl_mpio in -lhdf5
configure:31051: cc -o conftest -g -O2 -I/usr/local/hdf5_20/include
-L/usr/local/lib -L/usr/local/hdf5_20/lib conftest.c -lhdf5 -lhdf5_hl -lhdf5
-lm -lz -lhdf5 >&5
/tmp/cciNUj0H.o: In function `main':
/home/javier/javier/netcdf/netcdf3/conftest.c:81: undefined reference to
`H5Pget_fapl_mpio'
collect2: ld returned 1 exit status
configure:31058: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.0.1"
| #define PACKAGE_STRING "netCDF 4.0.1"
| #define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
| #define PACKAGE "netcdf"
| #define VERSION "4.0.1"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_NETCDF4 1
| #define H5_USE_16_API 1
| #define CHUNK_CACHE_SIZE 32000000
| #define CHUNK_CACHE_NELEMS 1000
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define USE_RENAMEV3 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define pgiFortran 1
| #define _FILE_OFFSET_BITS 64
| #define NF_INT1_T byte
| #define NF_INT2_T integer*2
| #define NF_INT1_IS_C_SIGNED_CHAR 1
| #define NF_INT2_IS_C_SHORT 1
| #define NF_INT_IS_C_INT 1
| #define NF_REAL_IS_C_FLOAT 1
| #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1
| #define NCBYTE_T byte
| #define NCSHORT_T integer*2
| #define HAVE_LOCALE_H 1
| #define HAVE__BOOL 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STRERROR 1
| #define HAVE_SNPRINTF 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISFINITE 0
| #define HAVE_DECL_SIGNBIT 0
| #define HAVE_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_ST_BLKSIZE 1
| #define HAVE_SSIZE_T 1
| #define HAVE_PTRDIFF_T 1
| #define SIZEOF_SHORT 2
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 4
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_SIZE_T 4
| #define HAVE_HDF5_H 1
| #define HAVE_LIBHDF5 1
| #define HAVE_LIBHDF5_HL 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char H5Pget_fapl_mpio ();
| int
| main ()
| {
| return H5Pget_fapl_mpio ();
| ;
| return 0;
| }
configure:31079: result: no
configure:31110: checking whether parallel I/O features are to be included
configure:31112: result: no
configure:31116: checking for H5Pset_deflate in -lhdf5
configure:31151: cc -o conftest -g -O2 -I/usr/local/hdf5_20/include
-L/usr/local/lib -L/usr/local/hdf5_20/lib conftest.c -lhdf5 -lhdf5_hl -lhdf5
-lm -lz -lhdf5 >&5
configure:31158: $? = 0
configure:31179: result: yes
configure:31243: checking for dirent.h that defines DIR
configure:31272: cc -c -g -O2 conftest.c >&5
configure:31279: $? = 0
configure:31296: result: yes
configure:31310: checking for library containing opendir
configure:31351: cc -o conftest -g -O2 conftest.c >&5
configure:31358: $? = 0
configure:31389: result: none required
configure:31487: checking for ANSI C header files
configure:31655: result: yes
configure:31665: checking for sys/wait.h that is POSIX.1 compatible
configure:31701: cc -c -g -O2 conftest.c >&5
configure:31708: $? = 0
configure:31723: result: yes
configure:31733: checking whether time.h and sys/time.h may both be included
configure:31763: cc -c -g -O2 conftest.c >&5
configure:31770: $? = 0
configure:31785: result: yes
configure:31821: checking stdio.h usability
configure:31838: cc -c -g -O2 conftest.c >&5
configure:31845: $? = 0
configure:31859: result: yes
configure:31863: checking stdio.h presence
configure:31878: cc -E conftest.c
configure:31885: $? = 0
configure:31899: result: yes
configure:31932: checking for stdio.h
configure:31941: result: yes
configure:31821: checking stdarg.h usability
configure:31838: cc -c -g -O2 conftest.c >&5
configure:31845: $? = 0
configure:31859: result: yes
configure:31863: checking stdarg.h presence
configure:31878: cc -E conftest.c
configure:31885: $? = 0
configure:31899: result: yes
configure:31932: checking for stdarg.h
configure:31941: result: yes
configure:31821: checking errno.h usability
configure:31838: cc -c -g -O2 conftest.c >&5
configure:31845: $? = 0
configure:31859: result: yes
configure:31863: checking errno.h presence
configure:31878: cc -E conftest.c
configure:31885: $? = 0
configure:31899: result: yes
configure:31932: checking for errno.h
configure:31941: result: yes
configure:31821: checking ctype.h usability
configure:31838: cc -c -g -O2 conftest.c >&5
configure:31845: $? = 0
configure:31859: result: yes
configure:31863: checking ctype.h presence
configure:31878: cc -E conftest.c
configure:31885: $? = 0
configure:31899: result: yes
configure:31932: checking for ctype.h
configure:31941: result: yes
configure:31821: checking fcntl.h usability
configure:31838: cc -c -g -O2 conftest.c >&5
configure:31845: $? = 0
configure:31859: result: yes
configure:31863: checking fcntl.h presence
configure:31878: cc -E conftest.c
configure:31885: $? = 0
configure:31899: result: yes
configure:31932: checking for fcntl.h
configure:31941: result: yes
configure:31821: checking malloc.h usability
configure:31838: cc -c -g -O2 conftest.c >&5
configure:31845: $? = 0
configure:31859: result: yes
configure:31863: checking malloc.h presence
configure:31878: cc -E conftest.c
configure:31885: $? = 0
configure:31899: result: yes
configure:31932: checking for malloc.h
configure:31941: result: yes
configure:31810: checking for stdlib.h
configure:31817: result: yes
configure:31810: checking for string.h
configure:31817: result: yes
configure:31810: checking for strings.h
configure:31817: result: yes
configure:31810: checking for unistd.h
configure:31817: result: yes
configure:31810: checking for sys/stat.h
configure:31817: result: yes
configure:31963: checking for strchr
configure:32019: cc -o conftest -g -O2 conftest.c >&5
conftest.c:109: warning: conflicting types for built-in function 'strchr'
configure:32026: $? = 0
configure:32048: result: yes
configure:31963: checking for strrchr
configure:32019: cc -o conftest -g -O2 conftest.c >&5
conftest.c:110: warning: conflicting types for built-in function 'strrchr'
configure:32026: $? = 0
configure:32048: result: yes
configure:31963: checking for mktemp
configure:32019: cc -o conftest -g -O2 conftest.c >&5
/tmp/cc6a1CGV.o: In function `main':
/home/javier/javier/netcdf/netcdf3/conftest.c:122: warning: the use of `mktemp'
is dangerous, better use `mkstemp' or `mkdtemp'
configure:32026: $? = 0
configure:32048: result: yes
configure:31963: checking for strcat
configure:32019: cc -o conftest -g -O2 conftest.c >&5
conftest.c:112: warning: conflicting types for built-in function 'strcat'
configure:32026: $? = 0
configure:32048: result: yes
configure:31963: checking for strcpy
configure:32019: cc -o conftest -g -O2 conftest.c >&5
conftest.c:113: warning: conflicting types for built-in function 'strcpy'
configure:32026: $? = 0
configure:32048: result: yes
configure:32063: checking for vprintf
configure:32119: cc -o conftest -g -O2 conftest.c >&5
conftest.c:114: warning: conflicting types for built-in function 'vprintf'
configure:32126: $? = 0
configure:32148: result: yes
configure:32156: checking for _doprnt
configure:32212: cc -o conftest -g -O2 conftest.c >&5
/tmp/ccS0HFrw.o: In function `main':
/home/javier/javier/netcdf/netcdf3/conftest.c:126: undefined reference to
`_doprnt'
collect2: ld returned 1 exit status
configure:32219: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "netCDF"
| #define PACKAGE_TARNAME "netcdf"
| #define PACKAGE_VERSION "4.0.1"
| #define PACKAGE_STRING "netCDF 4.0.1"
| #define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
| #define PACKAGE "netcdf"
| #define VERSION "4.0.1"
| #define NCIO_MINBLOCKSIZE 256
| #define USE_NETCDF4 1
| #define H5_USE_16_API 1
| #define CHUNK_CACHE_SIZE 32000000
| #define CHUNK_CACHE_NELEMS 1000
| #define CHUNK_CACHE_PREEMPTION 0.75
| #define USE_DAP 1
| #define USE_RENAMEV3 1
| #define USE_EXTREME_NUMBERS 1
| #define TEMP_LARGE "."
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define pgiFortran 1
| #define _FILE_OFFSET_BITS 64
| #define NF_INT1_T byte
| #define NF_INT2_T integer*2
| #define NF_INT1_IS_C_SIGNED_CHAR 1
| #define NF_INT2_IS_C_SHORT 1
| #define NF_INT_IS_C_INT 1
| #define NF_REAL_IS_C_FLOAT 1
| #define NF_DOUBLEPRECISION_IS_C_DOUBLE 1
| #define NCBYTE_T byte
| #define NCSHORT_T integer*2
| #define HAVE_LOCALE_H 1
| #define HAVE__BOOL 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STRERROR 1
| #define HAVE_SNPRINTF 1
| #define HAVE_ALLOCA_H 1
| #define HAVE_ALLOCA 1
| #define HAVE_DECL_ISNAN 1
| #define HAVE_DECL_ISINF 1
| #define HAVE_DECL_ISFINITE 0
| #define HAVE_DECL_SIGNBIT 0
| #define HAVE_LONG_LONG_INT 1
| #define HAVE_UNSIGNED_LONG_LONG_INT 1
| #define HAVE_STRUCT_STAT_ST_BLKSIZE 1
| #define HAVE_ST_BLKSIZE 1
| #define HAVE_SSIZE_T 1
| #define HAVE_PTRDIFF_T 1
| #define SIZEOF_SHORT 2
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 4
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_OFF_T 8
| #define SIZEOF_SIZE_T 4
| #define HAVE_HDF5_H 1
| #define HAVE_LIBHDF5 1
| #define HAVE_LIBHDF5_HL 1
| #define USE_ZLIB 1
| #define HAVE_DIRENT_H 1
| #define STDC_HEADERS 1
| #define HAVE_SYS_WAIT_H 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STDIO_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_CTYPE_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_MALLOC_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STRCHR 1
| #define HAVE_STRRCHR 1
| #define HAVE_MKTEMP 1
| #define HAVE_STRCAT 1
| #define HAVE_STRCPY 1
| #define HAVE_VPRINTF 1
| /* end confdefs.h. */
| /* Define _doprnt to an innocuous variant, in case <limits.h> declares
_doprnt.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define _doprnt innocuous__doprnt
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char _doprnt (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef _doprnt
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char _doprnt ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub__doprnt || defined __stub____doprnt
| choke me
| #endif
|
| int
| main ()
| {
| return _doprnt ();
| ;
| return 0;
| }
configure:32239: result: no
configure:32258: checking whether a location for the CURL library was specified
configure:32267: result: /usr/local
configure:32391: checking for library containing xdr_void
configure:32432: cc -o conftest -g -O2 conftest.c >&5
configure:32439: $? = 0
configure:32470: result: none required
configure:32490: XDR Functions appear to be in libc.
configure:32582: checking whether a location for liboc was specified
configure:32594: result: no
configure:32603: external oclib library not specified; using internal version
configure:32634: checking whether ncgen4 should be built
configure:32642: result: no
configure:32733: generating header files and makefiles
configure:33114: creating ./config.status
## ---------------------- ##
## Running config.status. ##
## ---------------------- ##
This file was extended by netCDF config.status 4.0.1, which was
generated by GNU Autoconf 2.62. Invocation command line was
CONFIG_FILES =
CONFIG_HEADERS =
CONFIG_LINKS =
CONFIG_COMMANDS =
$ ./config.status
on javier-laptop
config.status:1357: creating Makefile
config.status:1357: creating nc-config
config.status:1357: creating netcdf.pc
config.status:1357: creating man4/Makefile
config.status:1357: creating fortran/Makefile
config.status:1357: creating libsrc/Makefile
config.status:1357: creating libsrc4/Makefile
config.status:1357: creating nctest/Makefile
config.status:1357: creating nc_test4/Makefile
config.status:1357: creating nc_test/Makefile
config.status:1357: creating ncdump/Makefile
config.status:1357: creating ncgen/Makefile
config.status:1357: creating nf_test/Makefile
config.status:1357: creating cxx/Makefile
config.status:1357: creating cxx4/Makefile
config.status:1357: creating f90/Makefile
config.status:1357: creating examples/Makefile
config.status:1357: creating examples/C/Makefile
config.status:1357: creating examples/CDL/Makefile
config.status:1357: creating examples/CXX/Makefile
config.status:1357: creating examples/CXX4/Makefile
config.status:1357: creating examples/F90/Makefile
config.status:1357: creating examples/F77/Makefile
config.status:1357: creating win32/Makefile
config.status:1357: creating win32/NET/Makefile
config.status:1357: creating win32/NET/libsrc/Makefile
config.status:1357: creating win32/NET/ncdump/Makefile
config.status:1357: creating win32/NET/ncgen/Makefile
config.status:1357: creating win32/NET/examples/Makefile
config.status:1357: creating win32/NET/nctest/Makefile
config.status:1357: creating win32/NET/nc_test/Makefile
config.status:1357: creating libncdap3/Makefile
config.status:1357: creating libncdap3/oc/Makefile
config.status:1357: creating ncdap_test/Makefile
config.status:1357: creating ncdap_test/expected3/Makefile
config.status:1357: creating ncdap_test/testdata3/Makefile
config.status:1357: creating ncgen4/Makefile
config.status:1357: creating ncdump/cdl4/Makefile
config.status:1357: creating ncdump/expected4/Makefile
config.status:1357: creating config.h
config.status:1357: creating fortran/nfconfig1.inc
config.status:1631: executing depfiles commands
config.status:1631: executing libtool commands
## ---------------- ##
## Cache variables. ##
## ---------------- ##
ac_cv_build=i686-pc-linux-gnu
ac_cv_c_bigendian=no
ac_cv_c_char_unsigned=no
ac_cv_c_compiler_gnu=yes
ac_cv_c_const=yes
ac_cv_c_ieeefloat=yes
ac_cv_cxx_compiler_gnu=yes
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=
ac_cv_env_CC_value=
ac_cv_env_CFLAGS_set=
ac_cv_env_CFLAGS_value=
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=
ac_cv_env_CXXFLAGS_value=
ac_cv_env_CXX_set=
ac_cv_env_CXX_value=
ac_cv_env_F77_set=
ac_cv_env_F77_value=
ac_cv_env_FCFLAGS_set=
ac_cv_env_FCFLAGS_value=
ac_cv_env_FC_set=
ac_cv_env_FC_value=
ac_cv_env_FFLAGS_set=
ac_cv_env_FFLAGS_value=
ac_cv_env_LDFLAGS_set=
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_f77_compiler_gnu=yes
ac_cv_fc_compiler_gnu=yes
ac_cv_fc_srcext_f90=none
ac_cv_func__doprnt=no
ac_cv_func_alloca_works=yes
ac_cv_func_mktemp=yes
ac_cv_func_snprintf=yes
ac_cv_func_strcat=yes
ac_cv_func_strchr=yes
ac_cv_func_strcpy=yes
ac_cv_func_strerror=yes
ac_cv_func_strlcat=no
ac_cv_func_strrchr=yes
ac_cv_func_vprintf=yes
ac_cv_have_decl_isfinite=no
ac_cv_have_decl_isinf=yes
ac_cv_have_decl_isnan=yes
ac_cv_have_decl_signbit=no
ac_cv_header_ctype_h=yes
ac_cv_header_dirent_dirent_h=yes
ac_cv_header_dlfcn_h=yes
ac_cv_header_errno_h=yes
ac_cv_header_fcntl_h=yes
ac_cv_header_hdf5_h=yes
ac_cv_header_inttypes_h=yes
ac_cv_header_locale_h=yes
ac_cv_header_malloc_h=yes
ac_cv_header_memory_h=yes
ac_cv_header_stdarg_h=yes
ac_cv_header_stdbool_h=yes
ac_cv_header_stdc=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdio_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_sys_wait_h=yes
ac_cv_header_time=yes
ac_cv_header_unistd_h=yes
ac_cv_host=i686-pc-linux-gnu
ac_cv_lib_hdf5_H5Fflush=yes
ac_cv_lib_hdf5_H5Pget_fapl_mpio=no
ac_cv_lib_hdf5_H5Pget_fapl_mpiposix=no
ac_cv_lib_hdf5_H5Pset_deflate=yes
ac_cv_lib_hdf5_hl_H5DSis_scale=yes
ac_cv_member_struct_stat_st_blksize=yes
ac_cv_objext=o
ac_cv_path_EGREP='/bin/grep -E'
ac_cv_path_FGREP='/bin/grep -F'
ac_cv_path_GREP=/bin/grep
ac_cv_path_SED=/bin/sed
ac_cv_path_install='/usr/bin/install -c'
ac_cv_path_mkdir=/bin/mkdir
ac_cv_prog_AWK=mawk
ac_cv_prog_CPP='cc -E'
ac_cv_prog_CXXCPP='c++ -E'
ac_cv_prog_NM='/usr/bin/nm -B'
ac_cv_prog_ac_ct_AR=ar
ac_cv_prog_ac_ct_CC=cc
ac_cv_prog_ac_ct_CXX=c++
ac_cv_prog_ac_ct_F77=gfortran
ac_cv_prog_ac_ct_FC=gfortran
ac_cv_prog_ac_ct_RANLIB=ranlib
ac_cv_prog_ac_ct_STRIP=strip
ac_cv_prog_cc_c89=
ac_cv_prog_cc_cc_c_o=yes
ac_cv_prog_cc_g=yes
ac_cv_prog_cxx_g=yes
ac_cv_prog_f77_g=yes
ac_cv_prog_f90_uppercase_mod=no
ac_cv_prog_fc_g=yes
ac_cv_prog_make_make_set=yes
ac_cv_search_opendir='none required'
ac_cv_search_xdr_void='none required'
ac_cv_sizeof_double=8
ac_cv_sizeof_float=4
ac_cv_sizeof_int=4
ac_cv_sizeof_long=4
ac_cv_sizeof_off_t=8
ac_cv_sizeof_short=2
ac_cv_sizeof_size_t=4
ac_cv_sys_file_offset_bits=64
ac_cv_sys_largefile_CC=no
ac_cv_type__Bool=yes
ac_cv_type_long_long_int=yes
ac_cv_type_off_t=yes
ac_cv_type_ptrdiff_t=yes
ac_cv_type_size_t=yes
ac_cv_type_ssize_t=yes
ac_cv_type_uchar=no
ac_cv_type_unsigned_long_long_int=yes
ac_cv_working_alloca_h=yes
am_cv_CC_dependencies_compiler_type=gcc3
am_cv_CXX_dependencies_compiler_type=gcc3
ax_cv_f90_modflag=-I
lt_cv_deplibs_check_method=pass_all
lt_cv_file_magic_cmd='$MAGIC_CMD'
lt_cv_file_magic_test_file=
lt_cv_ld_reload_flag=-r
lt_cv_nm_interface='BSD nm'
lt_cv_objdir=.libs
lt_cv_path_LD=/usr/bin/ld
lt_cv_path_LDCXX=/usr/bin/ld
lt_cv_path_NM='/usr/bin/nm -B'
lt_cv_prog_compiler_c_o=yes
lt_cv_prog_compiler_c_o_CXX=yes
lt_cv_prog_compiler_c_o_F77=yes
lt_cv_prog_compiler_c_o_FC=yes
lt_cv_prog_compiler_pic_works=yes
lt_cv_prog_compiler_pic_works_CXX=yes
lt_cv_prog_compiler_pic_works_F77=yes
lt_cv_prog_compiler_pic_works_FC=yes
lt_cv_prog_compiler_rtti_exceptions=no
lt_cv_prog_compiler_static_works=yes
lt_cv_prog_compiler_static_works_CXX=yes
lt_cv_prog_compiler_static_works_F77=yes
lt_cv_prog_compiler_static_works_FC=yes
lt_cv_prog_gnu_ld=yes
lt_cv_prog_gnu_ldcxx=yes
lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[
]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][
]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'''
lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\) $/
{\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/
{"\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^
]*\) $/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \(lib[^
]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^
]*\)$/ {"lib\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int
\1();/p'\'' -e '\''s/^[ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\'''
lt_cv_sys_max_cmd_len=1572864
## ----------------- ##
## Output variables. ##
## ----------------- ##
ACLOCAL='${SHELL} /home/javier/javier/netcdf/netcdf3/missing --run aclocal-1.10'
ALLOCA=''
AMDEPBACKSLASH='\'
AMDEP_FALSE='#'
AMDEP_TRUE=''
AMTAR='${SHELL} /home/javier/javier/netcdf/netcdf3/missing --run tar'
AR='ar'
AUTOCONF='${SHELL} /home/javier/javier/netcdf/netcdf3/missing --run autoconf'
AUTOHEADER='${SHELL} /home/javier/javier/netcdf/netcdf3/missing --run
autoheader'
AUTOMAKE='${SHELL} /home/javier/javier/netcdf/netcdf3/missing --run
automake-1.10'
AWK='mawk'
BINFILE_NAME='binary-netcdf-4.0.1_gfortran_gfortran_c++.tar'
BUILD_BENCHMARKS_FALSE=''
BUILD_BENCHMARKS_TRUE='#'
BUILD_CXX4_FALSE=''
BUILD_CXX4_TRUE='#'
BUILD_CXX_FALSE='#'
BUILD_CXX_TRUE=''
BUILD_C_FALSE='#'
BUILD_C_TRUE=''
BUILD_DAP4_FALSE=''
BUILD_DAP4_TRUE='#'
BUILD_DAP_FALSE='#'
BUILD_DAP_TRUE=''
BUILD_DLL_FALSE=''
BUILD_DLL_TRUE='#'
BUILD_EXAMPLES_FALSE='#'
BUILD_EXAMPLES_TRUE=''
BUILD_F77_FALSE='#'
BUILD_F77_TRUE=''
BUILD_F90_FALSE='#'
BUILD_F90_TRUE=''
BUILD_NCGEN4_FALSE=''
BUILD_NCGEN4_TRUE='#'
BUILD_PARALLEL_FALSE=''
BUILD_PARALLEL_TRUE='#'
BUILD_SEPARATE_FORTRAN_FALSE=''
BUILD_SEPARATE_FORTRAN_TRUE='#'
BUILD_SHARED_FALSE=''
BUILD_SHARED_TRUE='#'
BUILD_UTILITIES_FALSE='#'
BUILD_UTILITIES_TRUE=''
BUILD_V2_FALSE='#'
BUILD_V2_TRUE=''
CC='cc'
CCDEPMODE='depmode=gcc3'
CFLAGS='-g -O2'
CPP='cc -E'
CPPFLAGS=''
CROSS_COMPILING_FALSE=''
CROSS_COMPILING_TRUE='#'
CURLDIR='/usr/local'
CURL_CFLAGS='-I/usr/local/include'
CURL_LIBS='-L/usr/local/lib -lcurl'
CXX='c++'
CXXCPP='c++ -E'
CXXDEPMODE='depmode=gcc3'
CXXFLAGS='-g -O2'
CYGPATH_W='echo'
DEFS='-DHAVE_CONFIG_H'
DEPDIR='.deps'
DSYMUTIL=''
DUMPBIN=''
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP='/bin/grep -E'
ENABLE_DAP_REMOTE_TESTS_FALSE=''
ENABLE_DAP_REMOTE_TESTS_TRUE='#'
EXEEXT=''
EXTRA_EXAMPLE_TESTS_FALSE=''
EXTRA_EXAMPLE_TESTS_TRUE='#'
EXTRA_TESTS_FALSE=''
EXTRA_TESTS_TRUE='#'
F77='gfortran'
FC='gfortran'
FCFLAGS='-g -O2'
FCFLAGS_f90=''
FFLAGS='-g -O2'
FGREP='/bin/grep -F'
FTPBINDIR='/home/ftp/pub/binary/dummy_system'
GREP='/bin/grep'
HAS_CXX='yes'
HAS_DAP='yes'
HAS_F77='yes'
HAS_F90='yes'
HAS_NC2='yes'
HAS_NC4='yes'
HDF5DIR='/usr/local/hdf5_20'
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_DOCS_FALSE=''
INSTALL_DOCS_TRUE='#'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
INTERNAL_OCLIB_FALSE='#'
INTERNAL_OCLIB_TRUE=''
LARGE_FILE_TESTS_FALSE=''
LARGE_FILE_TESTS_TRUE='#'
LD='/usr/bin/ld'
LDFLAGS=''
LIBOBJS=''
LIBS=''
LIBTOOL='$(SHELL) $(top_builddir)/libtool'
LIPO=''
LN_S='ln -s'
LTLIBOBJS=''
MAKEINFO='${SHELL} /home/javier/javier/netcdf/netcdf3/missing --run makeinfo'
MAKEWHATIS_CMD=''
MKDIR_P='/bin/mkdir -p'
MOD_FLAG='-I'
NC_FLIBS='-lnetcdf -L/usr/local/hdf5_20 -lhdf5_hl -lhdf5 -L/usr/local -lz
-L/usr/local/lib -lcurl'
NC_LIBS='-lnetcdf -L/usr/local/hdf5_20 -lhdf5_hl -lhdf5 -L/usr/local -lz
-L/usr/local/lib -lcurl'
NETCDF_C_LIB=''
NM='/usr/bin/nm -B'
NMEDIT=''
NMFLAGS=''
OBJEXT='o'
OCLIB_CFLAGS=''
OCLIB_LIBS=''
OTOOL64=''
OTOOL=''
PACKAGE='netcdf'
PACKAGE_BUGREPORT='support@xxxxxxxxxxxxxxxx'
PACKAGE_NAME='netCDF'
PACKAGE_STRING='netCDF 4.0.1'
PACKAGE_TARNAME='netcdf'
PACKAGE_VERSION='4.0.1'
PATH_SEPARATOR=':'
RANLIB='ranlib'
SED='/bin/sed'
SET_MAKE=''
SHAREEXT='so'
SHELL='/bin/bash'
STRIP='strip'
SZLIBDIR=''
TEST_F77_FALSE='#'
TEST_F77_TRUE=''
TEST_PARALLEL_FALSE=''
TEST_PARALLEL_TRUE='#'
UPPER_CASE_MOD_FALSE=''
UPPER_CASE_MOD_TRUE='#'
USE_FFIO_FALSE=''
USE_FFIO_TRUE='#'
USE_HDF5_DIR_FALSE='#'
USE_HDF5_DIR_TRUE=''
USE_LOGGING_FALSE=''
USE_LOGGING_TRUE='#'
USE_NETCDF4_FALSE='#'
USE_NETCDF4_TRUE=''
USE_NETCDF_C_LIB_DIR_FALSE=''
USE_NETCDF_C_LIB_DIR_TRUE='#'
USE_RENAMEV3_FALSE='#'
USE_RENAMEV3_TRUE=''
USE_SZLIB_DIR_FALSE=''
USE_SZLIB_DIR_TRUE='#'
USE_VALGRIND_TESTS_FALSE=''
USE_VALGRIND_TESTS_TRUE='#'
USE_ZLIB_DIR_FALSE='#'
USE_ZLIB_DIR_TRUE=''
VERSION='4.0.1'
WHATIS='whatis'
ZLIBDIR='/usr/local'
ac_ct_CC='cc'
ac_ct_CXX='c++'
ac_ct_DUMPBIN=''
ac_ct_F77='gfortran'
ac_ct_FC='gfortran'
am__fastdepCC_FALSE='#'
am__fastdepCC_TRUE=''
am__fastdepCXX_FALSE='#'
am__fastdepCXX_TRUE=''
am__include='include'
am__isrc=''
am__leading_dot='.'
am__quote=''
am__tar='${AMTAR} chof - "$$tardir"'
am__untar='${AMTAR} xf -'
bindir='${exec_prefix}/bin'
build='i686-pc-linux-gnu'
build_alias=''
build_cpu='i686'
build_os='linux-gnu'
build_vendor='pc'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
exec_prefix='${prefix}'
host='i686-pc-linux-gnu'
host_alias=''
host_cpu='i686'
host_os='linux-gnu'
host_vendor='pc'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
install_sh='$(SHELL) /home/javier/javier/netcdf/netcdf3/install-sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
lt_ECHO='echo'
mandir='${datarootdir}/man'
mkdir_p='/bin/mkdir -p'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='/usr/local/netcdf3'
prog=''
program_transform_name='s,x,x,'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
sysconfdir='${prefix}/etc'
target_alias=''
## ----------- ##
## confdefs.h. ##
## ----------- ##
#define PACKAGE_NAME "netCDF"
#define PACKAGE_TARNAME "netcdf"
#define PACKAGE_VERSION "4.0.1"
#define PACKAGE_STRING "netCDF 4.0.1"
#define PACKAGE_BUGREPORT "support@xxxxxxxxxxxxxxxx"
#define PACKAGE "netcdf"
#define VERSION "4.0.1"
#define NCIO_MINBLOCKSIZE 256
#define USE_NETCDF4 1
#define H5_USE_16_API 1
#define CHUNK_CACHE_SIZE 32000000
#define CHUNK_CACHE_NELEMS 1000
#define CHUNK_CACHE_PREEMPTION 0.75
#define USE_DAP 1
#define USE_RENAMEV3 1
#define USE_EXTREME_NUMBERS 1
#define TEMP_LARGE "."
#define STDC_HEADERS 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
#define HAVE_DLFCN_H 1
#define LT_OBJDIR ".libs/"
#define pgiFortran 1
#define _FILE_OFFSET_BITS 64
#define NF_INT1_T byte
#define NF_INT2_T integer*2
#define NF_INT1_IS_C_SIGNED_CHAR 1
#define NF_INT2_IS_C_SHORT 1
#define NF_INT_IS_C_INT 1
#define NF_REAL_IS_C_FLOAT 1
#define NF_DOUBLEPRECISION_IS_C_DOUBLE 1
#define NCBYTE_T byte
#define NCSHORT_T integer*2
#define HAVE_LOCALE_H 1
#define HAVE__BOOL 1
#define HAVE_STDBOOL_H 1
#define HAVE_STRERROR 1
#define HAVE_SNPRINTF 1
#define HAVE_ALLOCA_H 1
#define HAVE_ALLOCA 1
#define HAVE_DECL_ISNAN 1
#define HAVE_DECL_ISINF 1
#define HAVE_DECL_ISFINITE 0
#define HAVE_DECL_SIGNBIT 0
#define HAVE_LONG_LONG_INT 1
#define HAVE_UNSIGNED_LONG_LONG_INT 1
#define HAVE_STRUCT_STAT_ST_BLKSIZE 1
#define HAVE_ST_BLKSIZE 1
#define HAVE_SSIZE_T 1
#define HAVE_PTRDIFF_T 1
#define SIZEOF_SHORT 2
#define SIZEOF_INT 4
#define SIZEOF_LONG 4
#define SIZEOF_FLOAT 4
#define SIZEOF_DOUBLE 8
#define SIZEOF_OFF_T 8
#define SIZEOF_SIZE_T 4
#define HAVE_HDF5_H 1
#define HAVE_LIBHDF5 1
#define HAVE_LIBHDF5_HL 1
#define USE_ZLIB 1
#define HAVE_DIRENT_H 1
#define STDC_HEADERS 1
#define HAVE_SYS_WAIT_H 1
#define TIME_WITH_SYS_TIME 1
#define HAVE_STDIO_H 1
#define HAVE_STDARG_H 1
#define HAVE_ERRNO_H 1
#define HAVE_CTYPE_H 1
#define HAVE_FCNTL_H 1
#define HAVE_MALLOC_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_STRINGS_H 1
#define HAVE_UNISTD_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STRCHR 1
#define HAVE_STRRCHR 1
#define HAVE_MKTEMP 1
#define HAVE_STRCAT 1
#define HAVE_STRCPY 1
#define HAVE_VPRINTF 1
#define USE_DAP4 1
configure: exit 0
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by HDF5 configure 1.8.3, which was
generated by GNU Autoconf 2.61. Invocation command line was
$ ./configure --prefix=/usr/local/hdf5_20 --with-zlib=/usr/local
## --------- ##
## Platform. ##
## --------- ##
hostname = javier-laptop
uname -m = i686
uname -r = 2.6.28-14-generic
uname -s = Linux
uname -v = #47-Ubuntu SMP Sat Jul 25 00:28:35 UTC 2009
/usr/bin/uname -p = unknown
/bin/uname -X = unknown
/bin/arch = unknown
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = unknown
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /usr/local/sbin
PATH: /usr/local/bin
PATH: /usr/sbin
PATH: /usr/bin
PATH: /sbin
PATH: /bin
PATH: /usr/games
## ----------- ##
## Core tests. ##
## ----------- ##
configure:2177: checking for a BSD-compatible install
configure:2233: result: /usr/bin/install -c
configure:2244: checking whether build environment is sane
configure:2287: result: yes
configure:2315: checking for a thread-safe mkdir -p
configure:2354: result: /bin/mkdir -p
configure:2367: checking for gawk
configure:2397: result: no
configure:2367: checking for mawk
configure:2383: found /usr/bin/mawk
configure:2394: result: mawk
configure:2405: checking whether make sets $(MAKE)
configure:2426: result: yes
configure:2615: checking whether to enable maintainer-specific portions of
Makefiles
configure:2624: result: no
configure:2653: checking build system type
configure:2671: result: i686-pc-linux-gnu
configure:2693: checking host system type
configure:2708: result: i686-pc-linux-gnu
configure:2750: checking shell variables initial values
ACLOCAL='${SHELL} /home/javier/javier/netcdf/hdf52/bin/missing --run
aclocal-1.10'
AMTAR='${SHELL} /home/javier/javier/netcdf/hdf52/bin/missing --run tar'
AUTOCONF='${SHELL} /home/javier/javier/netcdf/hdf52/bin/missing --run autoconf'
AUTOHEADER='${SHELL} /home/javier/javier/netcdf/hdf52/bin/missing --run
autoheader'
AUTOMAKE='${SHELL} /home/javier/javier/netcdf/hdf52/bin/missing --run
automake-1.10'
AWK=mawk
BASH=/bin/bash
BASH_ARGC=([0]="2")
BASH_ARGV=([0]="--with-zlib=/usr/local" [1]="--prefix=/usr/local/hdf5_20")
BASH_LINENO=([0]="0")
BASH_SOURCE=([0]="./configure")
BASH_VERSINFO=([0]="3" [1]="2" [2]="48" [3]="1" [4]="release"
[5]="i486-pc-linux-gnu")
BASH_VERSION='3.2.48(1)-release'
CFLAGS=
COLORTERM=gnome-terminal
CONFIG_SHELL=/bin/bash
CPPFLAGS=
CXXFLAGS=
CYGPATH_W=echo
DBUS_SESSION_BUS_ADDRESS=unix:abstract=/tmp/dbus-1s7FCWHHRr,guid=9abeedf3bab10847b09b8bc44a76db35
DEFAULT_LIBS=
DESKTOP_SESSION=default
DIRSTACK=()
DISPLAY=:0.0
DUALCASE=1
ECHO=echo
ECHO_C=
ECHO_N=-n
ECHO_T=
EUID=1000
FC=
FCFLAGS=
GDMSESSION=default
GDM_LANG=es_AR.UTF-8
GDM_XSERVER_LOCATION=local
GNOME_DESKTOP_SESSION_ID=this-is-deprecated
GNOME_KEYRING_PID=3138
GNOME_KEYRING_SOCKET=/tmp/keyring-kRANBx/socket
GPG_AGENT_INFO=/tmp/seahorse-A2C1gz/S.gpg-agent:3303:1
GROUPS=()
GTK_MODULES=canberra-gtk-module
GTK_RC_FILES=/etc/gtk/gtkrc:/home/javier/.gtkrc-1.2-gnome2
HISTCONTROL=ignoreboth
HOME=/home/javier
HOSTNAME=javier-laptop
HOSTTYPE=i486
IFS='
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INSTALL='/usr/bin/install -c'
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
LANG=C
LANGUAGE=C
LC_ADDRESS=C
LC_ALL=C
LC_COLLATE=C
LC_CTYPE=C
LC_IDENTIFICATION=C
LC_MEASUREMENT=C
LC_MESSAGES=C
LC_MONETARY=C
LC_NAME=C
LC_NUMERIC=C
LC_PAPER=C
LC_TELEPHONE=C
LC_TIME=C
LESSCLOSE='/usr/bin/lesspipe %s %s'
LESSOPEN='| /usr/bin/lesspipe %s'
LIBOBJS=
LINENO=2750
LOGNAME=javier
LS_COLORS='no=00:fi=00:di=01;34:ln=01;36:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=40;31;01:su=37;41:sg=30;43:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.svgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.lzma=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.bz2=01;31:*.bz=01;31:*.tbz2=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.rar=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.aac=00;36:*.au=00;36:*.flac=00;36:*.mid=00;36:*.midi=00;36:*.mka=00;36:*.mp3=00;36:*.mpc=00;36:*.ogg=00;36:*.ra=00;36:*.wav=00;36:'
MACHTYPE=i486-pc-linux-gnu
MAINT='#'
MAINTAINER_MODE_FALSE=
MAINTAINER_MODE_TRUE='#'
MAKEFLAGS=
MAKEINFO='${SHELL} /home/javier/javier/netcdf/hdf52/bin/missing --run makeinfo'
MFLAGS=
MISSING='${SHELL} /home/javier/javier/netcdf/hdf52/bin/missing'
MKDIR_P='/bin/mkdir -p'
OPTERR=1
OPTIND=1
ORBIT_SOCKETDIR=/tmp/orbit-javier
OSTYPE=linux-gnu
PACKAGE=hdf5
PACKAGE_BUGREPORT=help@xxxxxxxxxxxx
PACKAGE_NAME=HDF5
PACKAGE_STRING='HDF5 1.8.3'
PACKAGE_TARNAME=hdf5
PACKAGE_VERSION=1.8.3
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PATH_SEPARATOR=:
PIPESTATUS=([0]="0")
POSIXLY_CORRECT=y
PPID=5631
PS1='$ '
PS2='> '
PS4='+ '
PWD=/home/javier/javier/netcdf/hdf52
SESSION_MANAGER=local/javier-laptop:/tmp/.ICE-unix/3151
SET_MAKE=
SHELL=/bin/bash
SHELLOPTS=braceexpand:hashall:interactive-comments:posix
SHLVL=2
SSH_AGENT_PID=3280
SSH_AUTH_SOCK=/tmp/keyring-kRANBx/socket.ssh
TERM=xterm
UID=1000
USER=javier
USERNAME=javier
USE_MAINTAINER_MODE=no
VERSION=1.8.3
WINDOWID=58761356
WINDOWPATH=7
XAUTHORITY=/home/javier/.Xauthority
XDG_DATA_DIRS=/usr/local/share/:/usr/share/:/usr/share/gdm/
XDG_SESSION_COOKIE=a103f0ce162915a6581dca974a6f0cac-1249303348.544036-859346860
_='checking shell variables initial values... '
ac_abs_confdir=/home/javier/javier/netcdf/hdf52
ac_arg=--with-zlib=/usr/local
ac_aux_dir=bin
ac_build_alias=i686-pc-linux-gnu
ac_cache_corrupted=false
ac_clean_files=
ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
ac_compiler_gnu=
ac_confdir=.
ac_config_commands=' default-1'
ac_config_guess='/bin/bash bin/config.guess'
ac_config_headers=' src/H5config.h'
ac_config_libobj_dir=.
ac_config_sub='/bin/bash bin/config.sub'
ac_configure='/bin/bash bin/configure'
ac_configure_args=' '\''--prefix=/usr/local/hdf5_20'\''
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ac_cpp='$CPP $CPPFLAGS'
ac_cv_build=i686-pc-linux-gnu
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=
ac_cv_env_CC_value=
ac_cv_env_CFLAGS_set=
ac_cv_env_CFLAGS_value=
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=
ac_cv_env_CXXFLAGS_value=
ac_cv_env_CXX_set=
ac_cv_env_CXX_value=
ac_cv_env_FCFLAGS_set=
ac_cv_env_FCFLAGS_value=
ac_cv_env_FC_set=
ac_cv_env_FC_value=
ac_cv_env_LDFLAGS_set=
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_host=i686-pc-linux-gnu
ac_cv_path_install='/usr/bin/install -c'
ac_cv_path_mkdir=/bin/mkdir
ac_cv_prog_AWK=mawk
ac_cv_prog_make_make_set=yes
ac_dashdash=
ac_default_prefix=/home/javier/javier/netcdf/hdf52/hdf5
ac_dir=bin
ac_env_CCC_set=
ac_env_CCC_value=
ac_env_CC_set=
ac_env_CC_value=
ac_env_CFLAGS_set=
ac_env_CFLAGS_value=
ac_env_CPPFLAGS_set=
ac_env_CPPFLAGS_value=
ac_env_CPP_set=
ac_env_CPP_value=
ac_env_CXXCPP_set=
ac_env_CXXCPP_value=
ac_env_CXXFLAGS_set=
ac_env_CXXFLAGS_value=
ac_env_CXX_set=
ac_env_CXX_value=
ac_env_FCFLAGS_set=
ac_env_FCFLAGS_value=
ac_env_FC_set=
ac_env_FC_value=
ac_env_LDFLAGS_set=
ac_env_LDFLAGS_value=
ac_env_LIBS_set=
ac_env_LIBS_value=
ac_env_build_alias_set=
ac_env_build_alias_value=
ac_env_host_alias_set=
ac_env_host_alias_value=
ac_env_target_alias_set=
ac_env_target_alias_value=
ac_exec_ext=
ac_ext=c
ac_hostname=javier-laptop
ac_includes_default='#include <stdio.h>
#ifdef HAVE_SYS_TYPES_H
# include <sys/types.h>
#endif
#ifdef HAVE_SYS_STAT_H
# include <sys/stat.h>
#endif
#ifdef STDC_HEADERS
# include <stdlib.h>
# include <stddef.h>
#else
# ifdef HAVE_STDLIB_H
# include <stdlib.h>
# endif
#endif
#ifdef HAVE_STRING_H
# if !defined STDC_HEADERS && defined HAVE_MEMORY_H
# include <memory.h>
# endif
# include <string.h>
#endif
#ifdef HAVE_STRINGS_H
# include <strings.h>
#endif
#ifdef HAVE_INTTYPES_H
# include <inttypes.h>
#endif
#ifdef HAVE_STDINT_H
# include <stdint.h>
#endif
#ifdef HAVE_UNISTD_H
# include <unistd.h>
#endif'
ac_init_help=
ac_init_version=false
ac_install_sh='bin/install-sh -c'
ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext
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ac_ls_di='5186321 .'
ac_make=make
ac_msg='sources are in ., but `cd .'\'' does not work'
ac_must_keep_next=false
ac_new_set=
ac_new_val=
ac_old_set=
ac_old_val=
ac_optarg=/usr/local
ac_option=--with-zlib=/usr/local
ac_package=zlib
ac_pass=2
ac_precious_vars='build_alias
host_alias
target_alias
CC
CFLAGS
LDFLAGS
LIBS
CPPFLAGS
FC
FCFLAGS
CXX
CXXFLAGS
CCC
CXXCPP
CPP'
ac_prev=
ac_prog=mawk
ac_pwd=/home/javier/javier/netcdf/hdf52
ac_pwd_ls_di='5186321 .'
ac_save_IFS='
'
ac_signal=0
ac_site_file=/usr/local/hdf5_20/etc/config.site
ac_srcdir_defaulted=yes
ac_subst_files=
ac_subst_vars='SHELL
PATH_SEPARATOR
PACKAGE_NAME
PACKAGE_TARNAME
PACKAGE_VERSION
PACKAGE_STRING
PACKAGE_BUGREPORT
exec_prefix
prefix
program_transform_name
bindir
sbindir
libexecdir
datarootdir
datadir
sysconfdir
sharedstatedir
localstatedir
includedir
oldincludedir
docdir
infodir
htmldir
dvidir
pdfdir
psdir
libdir
localedir
mandir
DEFS
ECHO_C
ECHO_N
ECHO_T
LIBS
build_alias
host_alias
target_alias
INSTALL_PROGRAM
INSTALL_SCRIPT
INSTALL_DATA
am__isrc
CYGPATH_W
PACKAGE
VERSION
ACLOCAL
AUTOCONF
AUTOMAKE
AUTOHEADER
MAKEINFO
install_sh
STRIP
INSTALL_STRIP_PROGRAM
mkdir_p
AWK
SET_MAKE
am__leading_dot
AMTAR
am__tar
am__untar
MAINTAINER_MODE_TRUE
MAINTAINER_MODE_FALSE
MAINT
build
build_cpu
build_vendor
build_os
host
host_cpu
host_vendor
host_os
CPPFLAGS
H5_CFLAGS
H5_CPPFLAGS
H5_FCFLAGS
H5_CXXFLAGS
EXTERNAL_FILTERS
MPE
STATIC_EXEC
HDF_FORTRAN
FC
HDF_CXX
CXX
HDF5_HL
GPFS
LINUX_LFS
INSTRUMENT
CODESTACK
HAVE_DMALLOC
DIRECT_VFD
THREADSAFE
STATIC_SHARED
enable_shared
enable_static
UNAME_INFO
CC
CFLAGS
LDFLAGS
ac_ct_CC
EXEEXT
OBJEXT
DEPDIR
am__include
am__quote
AMDEP_TRUE
AMDEP_FALSE
AMDEPBACKSLASH
CCDEPMODE
am__fastdepCC_TRUE
am__fastdepCC_FALSE
HDF5_INTERFACES
R_LARGE
R_INTEGER
HADDR_T
HSIZE_T
HSSIZE_T
HID_T
SIZE_T
OBJECT_NAMELEN_DEFAULT_F
FCFLAGS
ac_ct_FC
FCFLAGS_f90
F9XSUFFIXFLAG
FSEARCH_DIRS
F9XMODFLAG
F9XMODEXT
FCLIBS
FORTRAN_HAVE_SIZEOF_TRUE
FORTRAN_HAVE_SIZEOF_FALSE
FORTRAN_DEFAULT_REALisDBLE_F_TRUE
FORTRAN_DEFAULT_REALisDBLE_F_FALSE
CXXFLAGS
ac_ct_CXX
CXXDEPMODE
am__fastdepCXX_TRUE
am__fastdepCXX_FALSE
CXXCPP
LT_STATIC_EXEC
PERL
AR
TR
TIME
PARALLEL
RUNSERIAL
RUNPARALLEL
TESTPARALLEL
FORTRAN_SHARED_CONDITIONAL_TRUE
FORTRAN_SHARED_CONDITIONAL_FALSE
CXX_SHARED_CONDITIONAL_TRUE
CXX_SHARED_CONDITIONAL_FALSE
LIBTOOL
SED
GREP
EGREP
FGREP
LD
DUMPBIN
ac_ct_DUMPBIN
NM
LN_S
OBJDUMP
RANLIB
lt_ECHO
DSYMUTIL
NMEDIT
LIPO
OTOOL
OTOOL64
CPP
AM_MAKEFLAGS
USE_FILTER_DEFLATE
USE_FILTER_SZIP
LL_PATH
BUILD_SZIP_CONDITIONAL_TRUE
BUILD_SZIP_CONDITIONAL_FALSE
PTHREAD
H5_LONE_COLON
DEBUG_PKG
TRACE_API
INSTRUMENT_LIBRARY
CLEARFILEBUF
USINGMEMCHECKER
ADD_PARALLEL_FILES
MPI_GET_SIZE
FILTERS
USE_FILTER_SHUFFLE
USE_FILTER_FLETCHER32
USE_FILTER_NBIT
USE_FILTER_SCALEOFFSET
DIRECT_VFD_CONDITIONAL_TRUE
DIRECT_VFD_CONDITIONAL_FALSE
H5_VERSION
CONFIG_DATE
CONFIG_USER
CONFIG_MODE
BYTESEX
WORDS_BIGENDIAN
CC_VERSION
ROOT
DYNAMIC_DIRS
HL
HL_FOR
BUILD_ALL_CONDITIONAL_TRUE
BUILD_ALL_CONDITIONAL_FALSE
DEPRECATED_SYMBOLS
DEFAULT_API_VERSION
STRICT_FORMAT_CHECKS
BUILD_CXX_CONDITIONAL_TRUE
BUILD_CXX_CONDITIONAL_FALSE
BUILD_PARALLEL_CONDITIONAL_TRUE
BUILD_PARALLEL_CONDITIONAL_FALSE
BUILD_FORTRAN_CONDITIONAL_TRUE
BUILD_FORTRAN_CONDITIONAL_FALSE
BUILD_HDF5_HL_CONDITIONAL_TRUE
BUILD_HDF5_HL_CONDITIONAL_FALSE
SEARCH
SETX
LIBOBJS
LTLIBOBJS'
ac_tool_prefix=
ac_unique_file=src/H5.c
ac_val='${datarootdir}/man'
ac_var=CPP
ac_word=mawk
am__api_version=1.10
am__leading_dot=.
am__tar='${AMTAR} chof - "$$tardir"'
am__untar='${AMTAR} xf -'
am_aux_dir=/home/javier/javier/netcdf/hdf52/bin
am_missing_run='${SHELL} /home/javier/javier/netcdf/hdf52/bin/missing --run '
as_basename=basename
as_cr_LETTERS=ABCDEFGHIJKLMNOPQRSTUVWXYZ
as_cr_Letters=abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ
as_cr_alnum=abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789
as_cr_digits=0123456789
as_cr_letters=abcdefghijklmnopqrstuvwxyz
as_dir=/usr/bin
as_dirname=dirname
as_executable_p='test -x'
as_expr=expr
as_lineno_1=426
as_lineno_2=427
as_ln_s='ln -s'
as_me=configure
as_mkdir_p=:
as_myself=./configure
as_nl='
'
as_save_IFS='
'
as_test_x='test -x'
as_tr_cpp='eval sed
'\''y%*abcdefghijklmnopqrstuvwxyz%PABCDEFGHIJKLMNOPQRSTUVWXYZ%;s%[^_abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789]%_%g'\'''
as_tr_sh='eval sed
'\''y%*+%pp%;s%[^_abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789]%_%g'\'''
as_unset=unset
as_var=ac_cv_prog_make_make_set
bindir='${exec_prefix}/bin'
build=i686-pc-linux-gnu
build_cpu=i686
build_os=linux-gnu
build_vendor=pc
cache_file=/dev/null
cmd='sed 50q "$0"'
cross_compiling=no
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
echo_test_string='#! /bin/sh
# From configure.in Id: configure.in 16855 2009-04-24 03:28:44Z epourmal .
# Guess values for system-dependent variables and create Makefiles.
# Generated by GNU Autoconf 2.61 for HDF5 1.8.3.
#
# Report bugs to <help@xxxxxxxxxxxx>.
#
# Copyright (C) 1992, 1993, 1994, 1995, 1996, 1998, 1999, 2000, 2001,
# 2002, 2003, 2004, 2005, 2006 Free Software Foundation, Inc.
# This configure script is free software; the Free Software Foundation
# gives unlimited permission to copy, distribute and modify it.
## --------------------- ##
## M4sh Initialization. ##
## --------------------- ##
# Be more Bourne compatible
DUALCASE=1; export DUALCASE # for MKS sh
if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then
emulate sh
NULLCMD=:
# Zsh 3.x and 4.x performs word splitting on ${1+"$@"}, which
# is contrary to our usage. Disable this feature.
alias -g '\''${1+"$@"}'\''='\''"$@"'\''
setopt NO_GLOB_SUBST
else
case `(set -o) 2>/dev/null` in
*posix*) set -o posix ;;
esac
fi
# PATH needs CR
# Avoid depending upon Character Ranges.
as_cr_letters='\''abcdefghijklmnopqrstuvwxyz'\''
as_cr_LETTERS='\''ABCDEFGHIJKLMNOPQRSTUVWXYZ'\''
as_cr_Letters=$as_cr_letters$as_cr_LETTERS
as_cr_digits='\''0123456789'\''
as_cr_alnum=$as_cr_Letters$as_cr_digits
# The user is always right.
if test "${PATH_SEPARATOR+set}" != set; then
echo "#! /bin/sh" >conf$$.sh
echo "exit 0" >>conf$$.sh
chmod +x conf$$.sh
if (PATH="/nonexistent;."; conf$$.sh) >/dev/null 2>&1; then
PATH_SEPARATOR='\'';'\''
else'
echo_testing_string='#! /bin/sh
# From configure.in Id: configure.in 16855 2009-04-24 03:28:44Z epourmal .
# Guess values for system-dependent variables and create Makefiles.
# Generated by GNU Autoconf 2.61 for HDF5 1.8.3.
#
# Report bugs to <help@xxxxxxxxxxxx>.
#
# Copyright (C) 1992, 1993, 1994, 1995, 1996, 1998, 1999, 2000, 2001,
# 2002, 2003, 2004, 2005, 2006 Free Software Foundation, Inc.
# This configure script is free software; the Free Software Foundation
# gives unlimited permission to copy, distribute and modify it.
## --------------------- ##
## M4sh Initialization. ##
## --------------------- ##
# Be more Bourne compatible
DUALCASE=1; export DUALCASE # for MKS sh
if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then
emulate sh
NULLCMD=:
# Zsh 3.x and 4.x performs word splitting on ${1+"$@"}, which
# is contrary to our usage. Disable this feature.
alias -g '\''${1+"$@"}'\''='\''"$@"'\''
setopt NO_GLOB_SUBST
else
case `(set -o) 2>/dev/null` in
*posix*) set -o posix ;;
esac
fi
# PATH needs CR
# Avoid depending upon Character Ranges.
as_cr_letters='\''abcdefghijklmnopqrstuvwxyz'\''
as_cr_LETTERS='\''ABCDEFGHIJKLMNOPQRSTUVWXYZ'\''
as_cr_Letters=$as_cr_letters$as_cr_LETTERS
as_cr_digits='\''0123456789'\''
as_cr_alnum=$as_cr_Letters$as_cr_digits
# The user is always right.
if test "${PATH_SEPARATOR+set}" != set; then
echo "#! /bin/sh" >conf$$.sh
echo "exit 0" >>conf$$.sh
chmod +x conf$$.sh
if (PATH="/nonexistent;."; conf$$.sh) >/dev/null 2>&1; then
PATH_SEPARATOR='\'';'\''
else'
exec_prefix=NONE
host=i686-pc-linux-gnu
host_cpu=i686
host_os=linux-gnu
host_vendor=pc
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
install_sh='$(SHELL) /home/javier/javier/netcdf/hdf52/bin/install-sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
lt_ECHO=echo
mandir='${datarootdir}/man'
mkdir_p='/bin/mkdir -p'
no_create=
no_recursion=
oldincludedir=/usr/include
pdfdir='${docdir}'
prefix=/usr/local/hdf5_20
program_prefix=NONE
program_suffix=NONE
program_transform_name=s,x,x,
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
silent=
site=
srcdir=.
subdirs=
sysconfdir='${prefix}/etc'
target=
verbose=
with_zlib=/usr/local
x_includes=NONE
x_libraries=NONE
configure:2753: result: done
configure:2779: checking if basename works
configure:2787: result: yes
configure:2791: checking if xargs works
configure:2799: result: yes
configure:2803: checking for cached host
configure:2810: result: none
configure:2864: checking for config i686-pc-linux-gnu
configure:2872: result: no
configure:2864: checking for config i686-pc-linux-gnu
configure:2872: result: no
configure:2864: checking for config pc-linux-gnu
configure:2872: result: no
configure:2864: checking for config pc-linux-gnu
configure:2872: result: no
configure:2864: checking for config i686-linux-gnu
configure:2872: result: no
configure:2864: checking for config i686-linux-gnu
configure:2872: result: no
configure:2864: checking for config i686-pc
configure:2872: result: no
configure:2864: checking for config linux-gnu
configure:2868: result: found
configure:2883: checking for config ./config/site-specific/host-javier-laptop
configure:2891: result: no
configure:2950: checking for gcc
configure:2977: result: gcc
configure:3215: checking for C compiler version
configure:3222: gcc --version >&5
gcc (Ubuntu 4.3.3-5ubuntu4) 4.3.3
Copyright (C) 2008 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:3225: $? = 0
configure:3232: gcc -v >&5
Using built-in specs.
Target: i486-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 4.3.3-5ubuntu4'
--with-bugurl=file:///usr/share/doc/gcc-4.3/README.Bugs
--enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --enable-shared
--with-system-zlib --libexecdir=/usr/lib --without-included-gettext
--enable-threads=posix --enable-nls --with-gxx-include-dir=/usr/include/c++/4.3
--program-suffix=-4.3 --enable-clocale=gnu --enable-libstdcxx-debug
--enable-objc-gc --enable-mpfr --enable-targets=all --with-tune=generic
--enable-checking=release --build=i486-linux-gnu --host=i486-linux-gnu
--target=i486-linux-gnu
Thread model: posix
gcc version 4.3.3 (Ubuntu 4.3.3-5ubuntu4)
configure:3235: $? = 0
configure:3242: gcc -V >&5
gcc: '-V' option must have argument
configure:3245: $? = 1
configure:3268: checking for C compiler default output file name
configure:3295: gcc conftest.c >&5
configure:3298: $? = 0
configure:3336: result: a.out
configure:3353: checking whether the C compiler works
configure:3363: ./a.out
configure:3366: $? = 0
configure:3383: result: yes
configure:3390: checking whether we are cross compiling
configure:3392: result: no
configure:3395: checking for suffix of executables
configure:3402: gcc -o conftest conftest.c >&5
configure:3405: $? = 0
configure:3429: result:
configure:3435: checking for suffix of object files
configure:3461: gcc -c conftest.c >&5
configure:3464: $? = 0
configure:3487: result: o
configure:3491: checking whether we are using the GNU C compiler
configure:3520: gcc -c conftest.c >&5
configure:3526: $? = 0
configure:3543: result: yes
configure:3548: checking whether gcc accepts -g
configure:3578: gcc -c -g conftest.c >&5
configure:3584: $? = 0
configure:3683: result: yes
configure:3700: checking for gcc option to accept ISO C89
configure:3774: gcc -c conftest.c >&5
configure:3780: $? = 0
configure:3803: result: none needed
configure:3832: checking for style of include used by make
configure:3860: result: GNU
configure:3885: checking dependency style of gcc
configure:3976: result: gcc3
configure:3994: checking if Fortran interface enabled
configure:5814: checking for C++ compiler version
configure:5821: g++ --version >&5
g++ (Ubuntu 4.3.3-5ubuntu4) 4.3.3
Copyright (C) 2008 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:5824: $? = 0
configure:5831: g++ -v >&5
Using built-in specs.
Target: i486-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 4.3.3-5ubuntu4'
--with-bugurl=file:///usr/share/doc/gcc-4.3/README.Bugs
--enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --enable-shared
--with-system-zlib --libexecdir=/usr/lib --without-included-gettext
--enable-threads=posix --enable-nls --with-gxx-include-dir=/usr/include/c++/4.3
--program-suffix=-4.3 --enable-clocale=gnu --enable-libstdcxx-debug
--enable-objc-gc --enable-mpfr --enable-targets=all --with-tune=generic
--enable-checking=release --build=i486-linux-gnu --host=i486-linux-gnu
--target=i486-linux-gnu
Thread model: posix
gcc version 4.3.3 (Ubuntu 4.3.3-5ubuntu4)
configure:5834: $? = 0
configure:5841: g++ -V >&5
g++: '-V' option must have argument
configure:5844: $? = 1
configure:5847: checking whether we are using the GNU C++ compiler
configure:5884: g++ -c conftest.cpp >&5
configure:5890: $? = 0
configure:5907: result: yes
configure:5912: checking whether g++ accepts -g
configure:5950: g++ -c -g conftest.cpp >&5
configure:5956: $? = 0
configure:6071: result: yes
configure:6096: checking dependency style of g++
configure:6187: result: gcc3
configure:6207: checking how to run the C++ preprocessor
configure:6243: g++ -E conftest.cpp
configure:6249: $? = 0
configure:6280: g++ -E conftest.cpp
conftest.cpp:10:28: error: ac_nonexistent.h: No such file or directory
configure:6286: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:6319: result: g++ -E
configure:6348: g++ -E conftest.cpp
configure:6354: $? = 0
configure:6385: g++ -E conftest.cpp
conftest.cpp:10:28: error: ac_nonexistent.h: No such file or directory
configure:6391: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:6428: checking if c++ interface enabled
configure:6848: checking if should build only statically linked executables
configure:6871: checking for perl
configure:6887: found /usr/bin/perl
configure:6898: result: perl
configure:6917: checking for ar
configure:6933: found /usr/bin/ar
configure:6944: result: ar
configure:6961: checking whether make sets $(MAKE)
configure:6982: result: yes
configure:7004: checking for a BSD-compatible install
configure:7060: result: /usr/bin/install -c
configure:7076: checking for tr
configure:7094: found /usr/bin/tr
configure:7106: result: /usr/bin/tr
configure:7123: checking if srcdir= and time commands work together
configure:7131: result: yes
configure:7427: checking for a sed that does not truncate output
configure:7506: result: /bin/sed
configure:7524: checking for grep that handles long lines and -e
configure:7598: result: /bin/grep
configure:7603: checking for egrep
configure:7681: result: /bin/grep -E
configure:7686: checking for fgrep
configure:7764: result: /bin/grep -F
configure:7799: checking for ld used by gcc
configure:7866: result: /usr/bin/ld
configure:7875: checking if the linker (/usr/bin/ld) is GNU ld
configure:7890: result: yes
configure:7902: checking for BSD- or MS-compatible name lister (nm)
configure:7951: result: /usr/bin/nm -B
configure:8073: checking the name lister (/usr/bin/nm -B) interface
configure:8080: gcc -c conftest.c >&5
configure:8083: /usr/bin/nm -B "conftest.o"
configure:8086: output
00000000 B some_variable
configure:8093: result: BSD nm
configure:8096: checking whether ln -s works
configure:8100: result: yes
configure:8108: checking the maximum length of command line arguments
configure:8228: result: 1572864
configure:8245: checking whether the shell understands some XSI constructs
configure:8255: result: yes
configure:8259: checking whether the shell understands "+="
configure:8265: result: yes
configure:8300: checking for /usr/bin/ld option to reload object files
configure:8307: result: -r
configure:8376: checking for objdump
configure:8392: found /usr/bin/objdump
configure:8403: result: objdump
configure:8439: checking how to recognize dependent libraries
configure:8635: result: pass_all
configure:8804: checking for strip
configure:8820: found /usr/bin/strip
configure:8831: result: strip
configure:8907: checking for ranlib
configure:8923: found /usr/bin/ranlib
configure:8934: result: ranlib
configure:9028: checking command to parse /usr/bin/nm -B output from gcc object
configure:9146: gcc -c conftest.c >&5
configure:9149: $? = 0
configure:9153: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[
]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][
]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' \> conftest.nm
configure:9156: $? = 0
configure:9210: gcc -o conftest conftest.c conftstm.o >&5
configure:9213: $? = 0
configure:9251: result: ok
configure:10145: checking how to run the C preprocessor
configure:10185: gcc -E conftest.c
configure:10191: $? = 0
configure:10222: gcc -E conftest.c
conftest.c:10:28: error: ac_nonexistent.h: No such file or directory
configure:10228: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:10261: result: gcc -E
configure:10290: gcc -E conftest.c
configure:10296: $? = 0
configure:10327: gcc -E conftest.c
conftest.c:10:28: error: ac_nonexistent.h: No such file or directory
configure:10333: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:10371: checking for ANSI C header files
configure:10409: gcc -c conftest.c >&5
configure:10415: $? = 0
configure:10514: gcc -o conftest conftest.c >&5
configure:10517: $? = 0
configure:10523: ./conftest
configure:10526: $? = 0
configure:10543: result: yes
configure:10567: checking for sys/types.h
configure:10588: gcc -c conftest.c >&5
configure:10594: $? = 0
configure:10610: result: yes
configure:10567: checking for sys/stat.h
configure:10588: gcc -c conftest.c >&5
configure:10594: $? = 0
configure:10610: result: yes
configure:10567: checking for stdlib.h
configure:10588: gcc -c conftest.c >&5
configure:10594: $? = 0
configure:10610: result: yes
configure:10567: checking for string.h
configure:10588: gcc -c conftest.c >&5
configure:10594: $? = 0
configure:10610: result: yes
configure:10567: checking for memory.h
configure:10588: gcc -c conftest.c >&5
configure:10594: $? = 0
configure:10610: result: yes
configure:10567: checking for strings.h
configure:10588: gcc -c conftest.c >&5
configure:10594: $? = 0
configure:10610: result: yes
configure:10567: checking for inttypes.h
configure:10588: gcc -c conftest.c >&5
configure:10594: $? = 0
configure:10610: result: yes
configure:10567: checking for stdint.h
configure:10588: gcc -c conftest.c >&5
configure:10594: $? = 0
configure:10610: result: yes
configure:10567: checking for unistd.h
configure:10588: gcc -c conftest.c >&5
configure:10594: $? = 0
configure:10610: result: yes
configure:10626: checking for dlfcn.h
configure:10647: gcc -c conftest.c >&5
configure:10653: $? = 0
configure:10669: result: yes
configure:10798: checking for C++ compiler version
configure:10805: g++ --version >&5
g++ (Ubuntu 4.3.3-5ubuntu4) 4.3.3
Copyright (C) 2008 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:10808: $? = 0
configure:10815: g++ -v >&5
Using built-in specs.
Target: i486-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu 4.3.3-5ubuntu4'
--with-bugurl=file:///usr/share/doc/gcc-4.3/README.Bugs
--enable-languages=c,c++,fortran,objc,obj-c++ --prefix=/usr --enable-shared
--with-system-zlib --libexecdir=/usr/lib --without-included-gettext
--enable-threads=posix --enable-nls --with-gxx-include-dir=/usr/include/c++/4.3
--program-suffix=-4.3 --enable-clocale=gnu --enable-libstdcxx-debug
--enable-objc-gc --enable-mpfr --enable-targets=all --with-tune=generic
--enable-checking=release --build=i486-linux-gnu --host=i486-linux-gnu
--target=i486-linux-gnu
Thread model: posix
gcc version 4.3.3 (Ubuntu 4.3.3-5ubuntu4)
configure:10818: $? = 0
configure:10825: g++ -V >&5
g++: '-V' option must have argument
configure:10828: $? = 1
configure:10831: checking whether we are using the GNU C++ compiler
configure:10891: result: yes
configure:10896: checking whether g++ accepts -g
configure:11055: result: yes
configure:11080: checking dependency style of g++
configure:11171: result: gcc3
configure:11194: checking how to run the C++ preprocessor
configure:11306: result: g++ -E
configure:11335: g++ -E conftest.cpp
configure:11341: $? = 0
configure:11372: g++ -E conftest.cpp
conftest.cpp:21:28: error: ac_nonexistent.h: No such file or directory
configure:11378: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:11528: checking for Fortran compiler version
configure:11535: g95 --version >&5
./configure: line 11536: g95: command not found
configure:11538: $? = 127
configure:11545: g95 -v >&5
./configure: line 11546: g95: command not found
configure:11548: $? = 127
configure:11555: g95 -V >&5
./configure: line 11556: g95: command not found
configure:11558: $? = 127
configure:11566: checking whether we are using the GNU Fortran compiler
configure:11585: g95 -c conftest.F >&5
./configure: line 11586: g95: command not found
configure:11591: $? = 127
configure: failed program was:
| program main
| #ifndef __GNUC__
| choke me
| #endif
|
| end
configure:11608: result: no
configure:11614: checking whether g95 accepts -g
configure:11631: g95 -c -g conftest.f >&5
./configure: line 11632: g95: command not found
configure:11637: $? = 127
configure: failed program was:
| program main
|
| end
configure:11653: result: no
configure:11854: checking for objdir
configure:11869: result: .libs
configure:12161: checking if gcc supports -fno-rtti -fno-exceptions
configure:12179: gcc -c -fno-rtti -fno-exceptions conftest.c >&5
cc1: warning: command line option "-fno-rtti" is valid for C++/ObjC++ but not
for C
configure:12183: $? = 0
configure:12196: result: no
configure:12216: checking for gcc option to produce PIC
configure:12488: result: -fPIC -DPIC
configure:12500: checking if gcc PIC flag -fPIC -DPIC works
configure:12518: gcc -c -fPIC -DPIC -DPIC conftest.c >&5
configure:12522: $? = 0
configure:12535: result: yes
configure:12559: checking if gcc static flag -static works
configure:12587: result: yes
configure:12602: checking if gcc supports -c -o file.o
configure:12623: gcc -c -o out/conftest2.o conftest.c >&5
configure:12627: $? = 0
configure:12649: result: yes
configure:12657: checking if gcc supports -c -o file.o
configure:12704: result: yes
configure:12737: checking whether the gcc linker (/usr/bin/ld) supports shared
libraries
configure:13815: result: yes
configure:13852: checking whether -lc should be explicitly linked in
configure:13857: gcc -c conftest.c >&5
configure:13860: $? = 0
configure:13875: gcc -shared conftest.o -v -Wl,-soname -Wl,conftest -o
conftest 2\>\&1 \| /bin/grep -lc \>/dev/null 2\>\&1
configure:13878: $? = 0
configure:13890: result: no
configure:14054: checking dynamic linker characteristics
configure:14505: gcc -o conftest -Wl,-rpath -Wl,/foo conftest.c >&5
configure:14511: $? = 0
configure:14741: result: GNU/Linux ld.so
configure:14843: checking how to hardcode library paths into programs
configure:14868: result: immediate
configure:14995: checking for shl_load
configure:15059: gcc -o conftest conftest.c >&5
/tmp/ccA9V6TC.o: In function `main':
conftest.c:(.text+0x12): undefined reference to `shl_load'
collect2: ld returned 1 exit status
configure:15065: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| /* end confdefs.h. */
| /* Define shl_load to an innocuous variant, in case <limits.h> declares
shl_load.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define shl_load innocuous_shl_load
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char shl_load (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef shl_load
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char shl_load ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub_shl_load || defined __stub___shl_load
| choke me
| #endif
|
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| return shl_load ();
| ;
| return 0;
| }
configure:15082: result: no
configure:15087: checking for shl_load in -ldld
configure:15130: gcc -o conftest conftest.c -ldld >&5
/usr/bin/ld: cannot find -ldld
collect2: ld returned 1 exit status
configure:15136: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char shl_load ();
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| return shl_load ();
| ;
| return 0;
| }
configure:15154: result: no
configure:15159: checking for dlopen
configure:15223: gcc -o conftest conftest.c >&5
/tmp/ccUhQ81T.o: In function `main':
conftest.c:(.text+0x12): undefined reference to `dlopen'
collect2: ld returned 1 exit status
configure:15229: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| /* end confdefs.h. */
| /* Define dlopen to an innocuous variant, in case <limits.h> declares dlopen.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define dlopen innocuous_dlopen
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char dlopen (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef dlopen
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char dlopen ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub_dlopen || defined __stub___dlopen
| choke me
| #endif
|
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| return dlopen ();
| ;
| return 0;
| }
configure:15246: result: no
configure:15251: checking for dlopen in -ldl
configure:15294: gcc -o conftest conftest.c -ldl >&5
configure:15300: $? = 0
configure:15318: result: yes
configure:15503: checking whether a program can dlopen itself
configure:15573: gcc -o conftest -DHAVE_DLFCN_H -Wl,--export-dynamic
conftest.c -ldl >&5
configure:15576: $? = 0
configure:15594: result: yes
configure:15599: checking whether a statically linked program can dlopen itself
configure:15669: gcc -o conftest -DHAVE_DLFCN_H -Wl,--export-dynamic -static
conftest.c -ldl >&5
/tmp/ccHUyUBi.o: In function `main':
conftest.c:(.text+0x30): warning: Using 'dlopen' in statically linked
applications requires at runtime the shared libraries from the glibc version
used for linking
configure:15672: $? = 0
/lib/: cannot read file data: Is a directory
configure:15690: result: no
configure:15729: checking whether stripping libraries is possible
configure:15734: result: yes
configure:15769: checking if libtool supports shared libraries
configure:15771: result: yes
configure:15774: checking whether to build shared libraries
configure:15795: result: yes
configure:15798: checking whether to build static libraries
configure:15802: result: yes
configure:15952: checking for ld used by g++
configure:16019: result: /usr/bin/ld
configure:16028: checking if the linker (/usr/bin/ld) is GNU ld
configure:16043: result: yes
configure:16098: checking whether the g++ linker (/usr/bin/ld) supports shared
libraries
configure:17081: result: yes
configure:17109: g++ -c conftest.cpp >&5
configure:17112: $? = 0
configure:17294: checking for g++ option to produce PIC
configure:17611: result: -fPIC -DPIC
configure:17620: checking if g++ PIC flag -fPIC -DPIC works
configure:17638: g++ -c -fPIC -DPIC -DPIC conftest.cpp >&5
configure:17642: $? = 0
configure:17655: result: yes
configure:17676: checking if g++ static flag -static works
configure:17704: result: yes
configure:17716: checking if g++ supports -c -o file.o
configure:17737: g++ -c -o out/conftest2.o conftest.cpp >&5
configure:17741: $? = 0
configure:17763: result: yes
configure:17768: checking if g++ supports -c -o file.o
configure:17815: result: yes
configure:17845: checking whether the g++ linker (/usr/bin/ld) supports shared
libraries
configure:17871: result: yes
configure:18008: checking dynamic linker characteristics
configure:18407: g++ -o conftest -Wl,-rpath -Wl,/foo conftest.cpp >&5
configure:18413: $? = 0
configure:18643: result: GNU/Linux ld.so
configure:18694: checking how to hardcode library paths into programs
configure:18719: result: immediate
configure:18864: checking if libtool supports shared libraries
configure:18866: result: yes
configure:18869: checking whether to build shared libraries
configure:18889: result: yes
configure:18892: checking whether to build static libraries
configure:18896: result: yes
configure:18922: g95 -c conftest.f >&5
./configure: line 18923: g95: command not found
configure:18925: $? = 127
configure:19035: checking for g95 option to produce PIC
configure:19307: result:
configure:19372: checking if g95 static flag works
configure:19400: result: no
configure:19412: checking if g95 supports -c -o file.o
configure:19433: g95 -c -o out/conftest2.o conftest.f >&5
./configure: line 19434: g95: command not found
configure:19437: $? = 127
configure:19459: result: no
configure:19464: checking if g95 supports -c -o file.o
configure:19511: result: no
configure:19541: checking whether the g95 linker (/usr/bin/ld) supports shared
libraries
configure:20583: result: yes
configure:20720: checking dynamic linker characteristics
configure:21101: g95 -o conftest -rpath /foo conftest.f >&5
./configure: line 21102: g95: command not found
configure:21107: $? = 127
configure: failed program was:
| program main
|
| end
configure:21337: result: GNU/Linux ld.so
configure:21388: checking how to hardcode library paths into programs
configure:21413: result: immediate
configure:21483: checking if -Wl,-rpath should be used to link shared libs in
nondefault directories
configure:21500: result: yes
configure:21512: checking make
configure:21515: checking how make searches directories
configure:21532: result: VPATH=DIR1 DIR2 ...
configure:21590: checking whether make will build with undefined variables
configure:21599: result: yes
configure:21610: checking for production mode
configure:21621: result: production
configure:21658: checking for ceil in -lm
configure:21701: gcc -o conftest conftest.c -lm >&5
conftest.c:29: warning: conflicting types for built-in function 'ceil'
configure:21707: $? = 0
configure:21725: result: yes
configure:21899: checking for ANSI C header files
configure:22071: result: yes
configure:22081: checking whether time.h and sys/time.h may both be included
configure:22119: gcc -c conftest.c >&5
configure:22125: $? = 0
configure:22140: result: yes
configure:22155: checking for difftime
configure:22219: gcc -o conftest conftest.c -lm >&5
configure:22225: $? = 0
configure:22243: result: yes
configure:22257: checking for gettimeofday
configure:22321: gcc -o conftest conftest.c -lm >&5
configure:22327: $? = 0
configure:22345: result: yes
configure:22377: checking sys/resource.h usability
configure:22394: gcc -c conftest.c >&5
configure:22400: $? = 0
configure:22414: result: yes
configure:22418: checking sys/resource.h presence
configure:22433: gcc -E conftest.c
configure:22439: $? = 0
configure:22453: result: yes
configure:22486: checking for sys/resource.h
configure:22494: result: yes
configure:22377: checking sys/time.h usability
configure:22394: gcc -c conftest.c >&5
configure:22400: $? = 0
configure:22414: result: yes
configure:22418: checking sys/time.h presence
configure:22433: gcc -E conftest.c
configure:22439: $? = 0
configure:22453: result: yes
configure:22486: checking for sys/time.h
configure:22494: result: yes
configure:22367: checking for unistd.h
configure:22373: result: yes
configure:22377: checking sys/ioctl.h usability
configure:22394: gcc -c conftest.c >&5
configure:22400: $? = 0
configure:22414: result: yes
configure:22418: checking sys/ioctl.h presence
configure:22433: gcc -E conftest.c
configure:22439: $? = 0
configure:22453: result: yes
configure:22486: checking for sys/ioctl.h
configure:22494: result: yes
configure:22367: checking for sys/stat.h
configure:22373: result: yes
configure:22523: checking sys/socket.h usability
configure:22540: gcc -c conftest.c >&5
configure:22546: $? = 0
configure:22560: result: yes
configure:22564: checking sys/socket.h presence
configure:22579: gcc -E conftest.c
configure:22585: $? = 0
configure:22599: result: yes
configure:22632: checking for sys/socket.h
configure:22640: result: yes
configure:22513: checking for sys/types.h
configure:22519: result: yes
configure:22670: checking stddef.h usability
configure:22687: gcc -c conftest.c >&5
configure:22693: $? = 0
configure:22707: result: yes
configure:22711: checking stddef.h presence
configure:22726: gcc -E conftest.c
configure:22732: $? = 0
configure:22746: result: yes
configure:22779: checking for stddef.h
configure:22787: result: yes
configure:22670: checking setjmp.h usability
configure:22687: gcc -c conftest.c >&5
configure:22693: $? = 0
configure:22707: result: yes
configure:22711: checking setjmp.h presence
configure:22726: gcc -E conftest.c
configure:22732: $? = 0
configure:22746: result: yes
configure:22779: checking for setjmp.h
configure:22787: result: yes
configure:22670: checking features.h usability
configure:22687: gcc -c conftest.c >&5
configure:22693: $? = 0
configure:22707: result: yes
configure:22711: checking features.h presence
configure:22726: gcc -E conftest.c
configure:22732: $? = 0
configure:22746: result: yes
configure:22779: checking for features.h
configure:22787: result: yes
configure:22805: checking for stdint.h
configure:22811: result: yes
configure:23113: checking io.h usability
configure:23130: gcc -c conftest.c >&5
conftest.c:71:16: error: io.h: No such file or directory
configure:23136: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <io.h>
configure:23150: result: no
configure:23154: checking io.h presence
configure:23169: gcc -E conftest.c
conftest.c:38:16: error: io.h: No such file or directory
configure:23175: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| /* end confdefs.h. */
| #include <io.h>
configure:23189: result: no
configure:23222: checking for io.h
configure:23230: result: no
configure:23113: checking winsock.h usability
configure:23130: gcc -c conftest.c >&5
conftest.c:71:21: error: winsock.h: No such file or directory
configure:23136: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <winsock.h>
configure:23150: result: no
configure:23154: checking winsock.h presence
configure:23169: gcc -E conftest.c
conftest.c:38:21: error: winsock.h: No such file or directory
configure:23175: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| /* end confdefs.h. */
| #include <winsock.h>
configure:23189: result: no
configure:23222: checking for winsock.h
configure:23230: result: no
configure:23113: checking sys/timeb.h usability
configure:23130: gcc -c conftest.c >&5
configure:23136: $? = 0
configure:23150: result: yes
configure:23154: checking sys/timeb.h presence
configure:23169: gcc -E conftest.c
configure:23175: $? = 0
configure:23189: result: yes
configure:23222: checking for sys/timeb.h
configure:23230: result: yes
configure:23671: checking for large file support mode on Linux
configure:23674: result: enabled
configure:23717: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:23723: $? = 0
configure:23736: checking for lseek64
configure:23800: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:23806: $? = 0
configure:23824: result: yes
configure:23736: checking for fseek64
configure:23800: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
/tmp/cc6D88yL.o: In function `main':
conftest.c:(.text+0x12): undefined reference to `fseek64'
collect2: ld returned 1 exit status
configure:23806: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TIMEB_H 1
| #define HAVE_LSEEK64 1
| /* end confdefs.h. */
| /* Define fseek64 to an innocuous variant, in case <limits.h> declares
fseek64.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define fseek64 innocuous_fseek64
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char fseek64 (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef fseek64
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char fseek64 ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub_fseek64 || defined __stub___fseek64
| choke me
| #endif
|
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| return fseek64 ();
| ;
| return 0;
| }
configure:23824: result: no
configure:23736: checking for ftruncate64
configure:23800: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:23806: $? = 0
configure:23824: result: yes
configure:23736: checking for fseeko
configure:23800: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:23806: $? = 0
configure:23824: result: yes
configure:23736: checking for ftello
configure:23800: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:23806: $? = 0
configure:23824: result: yes
configure:23874: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:23880: $? = 0
configure:23890: checking for stat64
configure:23954: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:23960: $? = 0
configure:23978: result: yes
configure:23890: checking for fstat64
configure:23954: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:23960: $? = 0
configure:23978: result: yes
configure:23998: checking for off_t
configure:24036: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:24042: $? = 0
configure:24057: result: yes
configure:24069: checking for size_t
configure:24107: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:24113: $? = 0
configure:24128: result: yes
configure:24140: checking for ssize_t
configure:24178: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:24184: $? = 0
configure:24199: result: yes
configure:24211: checking whether byte ordering is bigendian
configure:24252: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:24258: $? = 0
configure:24298: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
conftest.c: In function 'main':
conftest.c:60: error: 'not' undeclared (first use in this function)
conftest.c:60: error: (Each undeclared identifier is reported only once
conftest.c:60: error: for each function it appears in.)
conftest.c:60: error: expected ';' before 'big'
configure:24304: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TIMEB_H 1
| #define HAVE_LSEEK64 1
| #define HAVE_FTRUNCATE64 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_STAT64 1
| #define HAVE_FSTAT64 1
| /* end confdefs.h. */
| #include <sys/types.h>
| #include <sys/param.h>
|
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| #if BYTE_ORDER != BIG_ENDIAN
| not big endian
| #endif
|
| ;
| return 0;
| }
configure:24460: result: no
configure:24479: checking for char
configure:24517: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:24523: $? = 0
configure:24538: result: yes
configure:24545: checking size of char
configure:24895: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:24898: $? = 0
configure:24904: ./conftest
configure:24907: $? = 0
configure:24930: result: 1
configure:24940: checking for short
configure:24978: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:24984: $? = 0
configure:24999: result: yes
configure:25006: checking size of short
configure:25356: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:25359: $? = 0
configure:25365: ./conftest
configure:25368: $? = 0
configure:25391: result: 2
configure:25401: checking for int
configure:25439: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:25445: $? = 0
configure:25460: result: yes
configure:25467: checking size of int
configure:25817: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:25820: $? = 0
configure:25826: ./conftest
configure:25829: $? = 0
configure:25852: result: 4
configure:25862: checking for long
configure:25900: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:25906: $? = 0
configure:25921: result: yes
configure:25928: checking size of long
configure:26278: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:26281: $? = 0
configure:26287: ./conftest
configure:26290: $? = 0
configure:26313: result: 4
configure:26323: checking for long long
configure:26361: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:26367: $? = 0
configure:26382: result: yes
configure:26389: checking size of long long
configure:26739: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:26742: $? = 0
configure:26748: ./conftest
configure:26751: $? = 0
configure:26774: result: 8
configure:26784: checking for __int64
configure:26822: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
conftest.c:83: error: expected '=', ',', ';', 'asm' or '__attribute__' before
'ac__type_new_'
conftest.c: In function 'main':
conftest.c:95: error: 'ac__type_new_' undeclared (first use in this function)
conftest.c:95: error: (Each undeclared identifier is reported only once
conftest.c:95: error: for each function it appears in.)
conftest.c:95: error: expected expression before ')' token
configure:26828: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TIMEB_H 1
| #define HAVE_LSEEK64 1
| #define HAVE_FTRUNCATE64 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_STAT64 1
| #define HAVE_FSTAT64 1
| #define SIZEOF_CHAR 1
| #define SIZEOF_SHORT 2
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 4
| #define SIZEOF_LONG_LONG 8
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| typedef __int64 ac__type_new_;
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| if ((ac__type_new_ *) 0)
| return 0;
| if (sizeof (ac__type_new_))
| return 0;
| ;
| return 0;
| }
configure:26843: result: no
configure:26850: checking size of __int64
configure:27200: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
conftest.c:83: error: expected '=', ',', ';', 'asm' or '__attribute__' before
'ac__type_sizeof_'
conftest.c: In function 'longval':
conftest.c:84: error: 'ac__type_sizeof_' undeclared (first use in this function)
conftest.c:84: error: (Each undeclared identifier is reported only once
conftest.c:84: error: for each function it appears in.)
conftest.c: In function 'ulongval':
conftest.c:85: error: 'ac__type_sizeof_' undeclared (first use in this function)
conftest.c: In function 'main':
conftest.c:103: error: 'ac__type_sizeof_' undeclared (first use in this
function)
configure:27203: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TIMEB_H 1
| #define HAVE_LSEEK64 1
| #define HAVE_FTRUNCATE64 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_STAT64 1
| #define HAVE_FSTAT64 1
| #define SIZEOF_CHAR 1
| #define SIZEOF_SHORT 2
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 4
| #define SIZEOF_LONG_LONG 8
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| typedef __int64 ac__type_sizeof_;
| static long int longval () { return (long int) (sizeof (ac__type_sizeof_)); }
| static unsigned long int ulongval () { return (long int) (sizeof
(ac__type_sizeof_)); }
| #include <stdio.h>
| #include <stdlib.h>
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
|
| FILE *f = fopen ("conftest.val", "w");
| if (! f)
| return 1;
| if (((long int) (sizeof (ac__type_sizeof_))) < 0)
| {
| long int i = longval ();
| if (i != ((long int) (sizeof (ac__type_sizeof_))))
| return 1;
| fprintf (f, "%ld\n", i);
| }
| else
| {
| unsigned long int i = ulongval ();
| if (i != ((long int) (sizeof (ac__type_sizeof_))))
| return 1;
| fprintf (f, "%lu\n", i);
| }
| return ferror (f) || fclose (f) != 0;
|
| ;
| return 0;
| }
configure:27235: result: 0
configure:27245: checking for float
configure:27283: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:27289: $? = 0
configure:27304: result: yes
configure:27311: checking size of float
configure:27661: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:27664: $? = 0
configure:27670: ./conftest
configure:27673: $? = 0
configure:27696: result: 4
configure:27706: checking for double
configure:27744: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:27750: $? = 0
configure:27765: result: yes
configure:27772: checking size of double
configure:28122: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:28125: $? = 0
configure:28131: ./conftest
configure:28134: $? = 0
configure:28157: result: 8
configure:28167: checking for long double
configure:28205: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:28211: $? = 0
configure:28226: result: yes
configure:28233: checking size of long double
configure:28583: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:28586: $? = 0
configure:28592: ./conftest
configure:28595: $? = 0
configure:28618: result: 12
configure:28713: checking for int8_t
configure:28751: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:28757: $? = 0
configure:28772: result: yes
configure:28779: checking size of int8_t
configure:29129: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:29132: $? = 0
configure:29138: ./conftest
configure:29141: $? = 0
configure:29164: result: 1
configure:29174: checking for uint8_t
configure:29212: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:29218: $? = 0
configure:29233: result: yes
configure:29240: checking size of uint8_t
configure:29590: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:29593: $? = 0
configure:29599: ./conftest
configure:29602: $? = 0
configure:29625: result: 1
configure:29635: checking for int_least8_t
configure:29673: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:29679: $? = 0
configure:29694: result: yes
configure:29701: checking size of int_least8_t
configure:30051: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:30054: $? = 0
configure:30060: ./conftest
configure:30063: $? = 0
configure:30086: result: 1
configure:30096: checking for uint_least8_t
configure:30134: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:30140: $? = 0
configure:30155: result: yes
configure:30162: checking size of uint_least8_t
configure:30512: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:30515: $? = 0
configure:30521: ./conftest
configure:30524: $? = 0
configure:30547: result: 1
configure:30557: checking for int_fast8_t
configure:30595: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:30601: $? = 0
configure:30616: result: yes
configure:30623: checking size of int_fast8_t
configure:30973: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:30976: $? = 0
configure:30982: ./conftest
configure:30985: $? = 0
configure:31008: result: 1
configure:31018: checking for uint_fast8_t
configure:31056: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:31062: $? = 0
configure:31077: result: yes
configure:31084: checking size of uint_fast8_t
configure:31434: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:31437: $? = 0
configure:31443: ./conftest
configure:31446: $? = 0
configure:31469: result: 1
configure:31480: checking for int16_t
configure:31518: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:31524: $? = 0
configure:31539: result: yes
configure:31546: checking size of int16_t
configure:31896: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:31899: $? = 0
configure:31905: ./conftest
configure:31908: $? = 0
configure:31931: result: 2
configure:31941: checking for uint16_t
configure:31979: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:31985: $? = 0
configure:32000: result: yes
configure:32007: checking size of uint16_t
configure:32357: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:32360: $? = 0
configure:32366: ./conftest
configure:32369: $? = 0
configure:32392: result: 2
configure:32402: checking for int_least16_t
configure:32440: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:32446: $? = 0
configure:32461: result: yes
configure:32468: checking size of int_least16_t
configure:32818: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:32821: $? = 0
configure:32827: ./conftest
configure:32830: $? = 0
configure:32853: result: 2
configure:32863: checking for uint_least16_t
configure:32901: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:32907: $? = 0
configure:32922: result: yes
configure:32929: checking size of uint_least16_t
configure:33279: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:33282: $? = 0
configure:33288: ./conftest
configure:33291: $? = 0
configure:33314: result: 2
configure:33324: checking for int_fast16_t
configure:33362: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:33368: $? = 0
configure:33383: result: yes
configure:33390: checking size of int_fast16_t
configure:33740: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:33743: $? = 0
configure:33749: ./conftest
configure:33752: $? = 0
configure:33775: result: 4
configure:33785: checking for uint_fast16_t
configure:33823: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:33829: $? = 0
configure:33844: result: yes
configure:33851: checking size of uint_fast16_t
configure:34201: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:34204: $? = 0
configure:34210: ./conftest
configure:34213: $? = 0
configure:34236: result: 4
configure:34247: checking for int32_t
configure:34285: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:34291: $? = 0
configure:34306: result: yes
configure:34313: checking size of int32_t
configure:34663: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:34666: $? = 0
configure:34672: ./conftest
configure:34675: $? = 0
configure:34698: result: 4
configure:34708: checking for uint32_t
configure:34746: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:34752: $? = 0
configure:34767: result: yes
configure:34774: checking size of uint32_t
configure:35124: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:35127: $? = 0
configure:35133: ./conftest
configure:35136: $? = 0
configure:35159: result: 4
configure:35169: checking for int_least32_t
configure:35207: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:35213: $? = 0
configure:35228: result: yes
configure:35235: checking size of int_least32_t
configure:35585: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:35588: $? = 0
configure:35594: ./conftest
configure:35597: $? = 0
configure:35620: result: 4
configure:35630: checking for uint_least32_t
configure:35668: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:35674: $? = 0
configure:35689: result: yes
configure:35696: checking size of uint_least32_t
configure:36046: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:36049: $? = 0
configure:36055: ./conftest
configure:36058: $? = 0
configure:36081: result: 4
configure:36091: checking for int_fast32_t
configure:36129: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:36135: $? = 0
configure:36150: result: yes
configure:36157: checking size of int_fast32_t
configure:36507: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:36510: $? = 0
configure:36516: ./conftest
configure:36519: $? = 0
configure:36542: result: 4
configure:36552: checking for uint_fast32_t
configure:36590: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:36596: $? = 0
configure:36611: result: yes
configure:36618: checking size of uint_fast32_t
configure:36968: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:36971: $? = 0
configure:36977: ./conftest
configure:36980: $? = 0
configure:37003: result: 4
configure:37014: checking for int64_t
configure:37052: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:37058: $? = 0
configure:37073: result: yes
configure:37080: checking size of int64_t
configure:37430: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:37433: $? = 0
configure:37439: ./conftest
configure:37442: $? = 0
configure:37465: result: 8
configure:37475: checking for uint64_t
configure:37513: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:37519: $? = 0
configure:37534: result: yes
configure:37541: checking size of uint64_t
configure:37891: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:37894: $? = 0
configure:37900: ./conftest
configure:37903: $? = 0
configure:37926: result: 8
configure:37936: checking for int_least64_t
configure:37974: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:37980: $? = 0
configure:37995: result: yes
configure:38002: checking size of int_least64_t
configure:38352: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:38355: $? = 0
configure:38361: ./conftest
configure:38364: $? = 0
configure:38387: result: 8
configure:38397: checking for uint_least64_t
configure:38435: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:38441: $? = 0
configure:38456: result: yes
configure:38463: checking size of uint_least64_t
configure:38813: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:38816: $? = 0
configure:38822: ./conftest
configure:38825: $? = 0
configure:38848: result: 8
configure:38858: checking for int_fast64_t
configure:38896: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:38902: $? = 0
configure:38917: result: yes
configure:38924: checking size of int_fast64_t
configure:39274: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:39277: $? = 0
configure:39283: ./conftest
configure:39286: $? = 0
configure:39309: result: 8
configure:39319: checking for uint_fast64_t
configure:39357: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:39363: $? = 0
configure:39378: result: yes
configure:39385: checking size of uint_fast64_t
configure:39735: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:39738: $? = 0
configure:39744: ./conftest
configure:39747: $? = 0
configure:39770: result: 8
configure:39781: checking for size_t
configure:39840: result: yes
configure:39847: checking size of size_t
configure:40197: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:40200: $? = 0
configure:40206: ./conftest
configure:40209: $? = 0
configure:40232: result: 4
configure:40242: checking for ssize_t
configure:40301: result: yes
configure:40308: checking size of ssize_t
configure:40658: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:40661: $? = 0
configure:40667: ./conftest
configure:40670: $? = 0
configure:40693: result: 4
configure:40707: checking for off_t
configure:40766: result: yes
configure:40773: checking size of off_t
configure:41123: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:41126: $? = 0
configure:41132: ./conftest
configure:41135: $? = 0
configure:41158: result: 8
configure:41168: checking for off64_t
configure:41206: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:41212: $? = 0
configure:41227: result: yes
configure:41234: checking size of off64_t
configure:41584: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c
-lm >&5
configure:41587: $? = 0
configure:41593: ./conftest
configure:41596: $? = 0
configure:41619: result: 8
configure:41704: checking if dev_t is scalar
configure:41739: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE conftest.c >&5
configure:41745: $? = 0
configure:41755: result: yes
configure:42022: checking for dmalloc library
configure:42024: result: suppressed
configure:42688: checking zlib.h usability
configure:42705: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/usr/local/include conftest.c >&5
configure:42711: $? = 0
configure:42725: result: yes
configure:42729: checking zlib.h presence
configure:42744: gcc -E -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/usr/local/include conftest.c
configure:42750: $? = 0
configure:42764: result: yes
configure:42797: checking for zlib.h
configure:42805: result: yes
configure:42826: checking for compress2 in -lz
configure:42869: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:42875: $? = 0
configure:42893: result: yes
configure:42906: checking for compress2
configure:42970: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:42976: $? = 0
configure:42993: result: yes
configure:43271: checking for szlib
configure:43273: result: suppressed
configure:43978: checking for pthread
configure:43980: result: suppressed
configure:44475: checking for thread safe support
configure:44497: result: no
configure:44574: checking for tm_gmtoff in struct tm
configure:44607: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/usr/local/include conftest.c >&5
configure:44613: $? = 0
configure:44623: result: yes
configure:44635: checking for __tm_gmtoff in struct tm
configure:44668: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/usr/local/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:104: error: 'struct tm' has no member named '__tm_gmtoff'
configure:44674: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TIMEB_H 1
| #define HAVE_LSEEK64 1
| #define HAVE_FTRUNCATE64 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_STAT64 1
| #define HAVE_FSTAT64 1
| #define SIZEOF_CHAR 1
| #define SIZEOF_SHORT 2
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 4
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF___INT64 0
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 12
| #include <sys/types.h>
| #include <stdint.h>
| #define SIZEOF_INT8_T 1
| #define SIZEOF_UINT8_T 1
| #define SIZEOF_INT_LEAST8_T 1
| #define SIZEOF_UINT_LEAST8_T 1
| #define SIZEOF_INT_FAST8_T 1
| #define SIZEOF_UINT_FAST8_T 1
| #define SIZEOF_INT16_T 2
| #define SIZEOF_UINT16_T 2
| #define SIZEOF_INT_LEAST16_T 2
| #define SIZEOF_UINT_LEAST16_T 2
| #define SIZEOF_INT_FAST16_T 4
| #define SIZEOF_UINT_FAST16_T 4
| #define SIZEOF_INT32_T 4
| #define SIZEOF_UINT32_T 4
| #define SIZEOF_INT_LEAST32_T 4
| #define SIZEOF_UINT_LEAST32_T 4
| #define SIZEOF_INT_FAST32_T 4
| #define SIZEOF_UINT_FAST32_T 4
| #define SIZEOF_INT64_T 8
| #define SIZEOF_UINT64_T 8
| #define SIZEOF_INT_LEAST64_T 8
| #define SIZEOF_UINT_LEAST64_T 8
| #define SIZEOF_INT_FAST64_T 8
| #define SIZEOF_UINT_FAST64_T 8
| #define SIZEOF_SIZE_T 4
| #define SIZEOF_SSIZE_T 4
| #include <sys/types.h> /*for off_t definition*/
| #define SIZEOF_OFF_T 8
| #define SIZEOF_OFF64_T 8
| #define DEV_T_IS_SCALAR 1
| #define HAVE_ZLIB_H 1
| #define HAVE_LIBZ 1
| #define HAVE_FILTER_DEFLATE 1
| #define HAVE_TM_GMTOFF 1
| /* end confdefs.h. */
|
| #include <sys/time.h>
| #include <time.h>
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| struct tm tm; tm.__tm_gmtoff=0;
| ;
| return 0;
| }
configure:44690: result: no
configure:44696: checking for global timezone variable
configure:44736: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
conftest.c: In function 'main':
conftest.c:104: error: 'timezone' undeclared (first use in this function)
conftest.c:104: error: (Each undeclared identifier is reported only once
conftest.c:104: error: for each function it appears in.)
configure:44742: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TIMEB_H 1
| #define HAVE_LSEEK64 1
| #define HAVE_FTRUNCATE64 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_STAT64 1
| #define HAVE_FSTAT64 1
| #define SIZEOF_CHAR 1
| #define SIZEOF_SHORT 2
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 4
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF___INT64 0
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 12
| #include <sys/types.h>
| #include <stdint.h>
| #define SIZEOF_INT8_T 1
| #define SIZEOF_UINT8_T 1
| #define SIZEOF_INT_LEAST8_T 1
| #define SIZEOF_UINT_LEAST8_T 1
| #define SIZEOF_INT_FAST8_T 1
| #define SIZEOF_UINT_FAST8_T 1
| #define SIZEOF_INT16_T 2
| #define SIZEOF_UINT16_T 2
| #define SIZEOF_INT_LEAST16_T 2
| #define SIZEOF_UINT_LEAST16_T 2
| #define SIZEOF_INT_FAST16_T 4
| #define SIZEOF_UINT_FAST16_T 4
| #define SIZEOF_INT32_T 4
| #define SIZEOF_UINT32_T 4
| #define SIZEOF_INT_LEAST32_T 4
| #define SIZEOF_UINT_LEAST32_T 4
| #define SIZEOF_INT_FAST32_T 4
| #define SIZEOF_UINT_FAST32_T 4
| #define SIZEOF_INT64_T 8
| #define SIZEOF_UINT64_T 8
| #define SIZEOF_INT_LEAST64_T 8
| #define SIZEOF_UINT_LEAST64_T 8
| #define SIZEOF_INT_FAST64_T 8
| #define SIZEOF_UINT_FAST64_T 8
| #define SIZEOF_SIZE_T 4
| #define SIZEOF_SSIZE_T 4
| #include <sys/types.h> /*for off_t definition*/
| #define SIZEOF_OFF_T 8
| #define SIZEOF_OFF64_T 8
| #define DEV_T_IS_SCALAR 1
| #define HAVE_ZLIB_H 1
| #define HAVE_LIBZ 1
| #define HAVE_FILTER_DEFLATE 1
| #define HAVE_TM_GMTOFF 1
| /* end confdefs.h. */
|
| #include <sys/time.h>
| #include <time.h>
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| timezone=0;
| ;
| return 0;
| }
configure:44759: result: no
configure:44768: checking whether struct tm is in sys/time.h or time.h
configure:44806: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/usr/local/include conftest.c >&5
configure:44812: $? = 0
configure:44827: result: time.h
configure:44837: checking for struct tm.tm_zone
configure:44876: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/usr/local/include conftest.c >&5
configure:44882: $? = 0
configure:44950: result: yes
configure:45117: checking for struct timezone
configure:45151: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/usr/local/include conftest.c >&5
configure:45157: $? = 0
configure:45168: result: yes
configure:45182: checking whether gettimeofday() gives timezone
configure:45222: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
conftest.c: In function 'main':
conftest.c:105: warning: incompatible implicit declaration of built-in function
'exit'
configure:45225: $? = 0
configure:45231: ./conftest
configure:45234: $? = 0
configure:45253: result: yes
configure:45266: checking for st_blocks in struct stat
configure:45298: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/usr/local/include conftest.c >&5
configure:45304: $? = 0
configure:45314: result: yes
configure:45332: checking for _getvideoconfig
configure:45396: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
/tmp/ccEjxTco.o: In function `main':
conftest.c:(.text+0x12): undefined reference to `_getvideoconfig'
collect2: ld returned 1 exit status
configure:45402: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TIMEB_H 1
| #define HAVE_LSEEK64 1
| #define HAVE_FTRUNCATE64 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_STAT64 1
| #define HAVE_FSTAT64 1
| #define SIZEOF_CHAR 1
| #define SIZEOF_SHORT 2
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 4
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF___INT64 0
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 12
| #include <sys/types.h>
| #include <stdint.h>
| #define SIZEOF_INT8_T 1
| #define SIZEOF_UINT8_T 1
| #define SIZEOF_INT_LEAST8_T 1
| #define SIZEOF_UINT_LEAST8_T 1
| #define SIZEOF_INT_FAST8_T 1
| #define SIZEOF_UINT_FAST8_T 1
| #define SIZEOF_INT16_T 2
| #define SIZEOF_UINT16_T 2
| #define SIZEOF_INT_LEAST16_T 2
| #define SIZEOF_UINT_LEAST16_T 2
| #define SIZEOF_INT_FAST16_T 4
| #define SIZEOF_UINT_FAST16_T 4
| #define SIZEOF_INT32_T 4
| #define SIZEOF_UINT32_T 4
| #define SIZEOF_INT_LEAST32_T 4
| #define SIZEOF_UINT_LEAST32_T 4
| #define SIZEOF_INT_FAST32_T 4
| #define SIZEOF_UINT_FAST32_T 4
| #define SIZEOF_INT64_T 8
| #define SIZEOF_UINT64_T 8
| #define SIZEOF_INT_LEAST64_T 8
| #define SIZEOF_UINT_LEAST64_T 8
| #define SIZEOF_INT_FAST64_T 8
| #define SIZEOF_UINT_FAST64_T 8
| #define SIZEOF_SIZE_T 4
| #define SIZEOF_SSIZE_T 4
| #include <sys/types.h> /*for off_t definition*/
| #define SIZEOF_OFF_T 8
| #define SIZEOF_OFF64_T 8
| #define DEV_T_IS_SCALAR 1
| #define HAVE_ZLIB_H 1
| #define HAVE_LIBZ 1
| #define HAVE_FILTER_DEFLATE 1
| #define HAVE_TM_GMTOFF 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_TIMEZONE 1
| #define GETTIMEOFDAY_GIVES_TZ 1
| #define HAVE_STAT_ST_BLOCKS 1
| /* end confdefs.h. */
| /* Define _getvideoconfig to an innocuous variant, in case <limits.h>
declares _getvideoconfig.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define _getvideoconfig innocuous__getvideoconfig
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char _getvideoconfig (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef _getvideoconfig
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char _getvideoconfig ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub__getvideoconfig || defined __stub____getvideoconfig
| choke me
| #endif
|
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| return _getvideoconfig ();
| ;
| return 0;
| }
configure:45420: result: no
configure:45332: checking for gettextinfo
configure:45396: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
/tmp/cc8Mdmem.o: In function `main':
conftest.c:(.text+0x12): undefined reference to `gettextinfo'
collect2: ld returned 1 exit status
configure:45402: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TIMEB_H 1
| #define HAVE_LSEEK64 1
| #define HAVE_FTRUNCATE64 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_STAT64 1
| #define HAVE_FSTAT64 1
| #define SIZEOF_CHAR 1
| #define SIZEOF_SHORT 2
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 4
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF___INT64 0
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 12
| #include <sys/types.h>
| #include <stdint.h>
| #define SIZEOF_INT8_T 1
| #define SIZEOF_UINT8_T 1
| #define SIZEOF_INT_LEAST8_T 1
| #define SIZEOF_UINT_LEAST8_T 1
| #define SIZEOF_INT_FAST8_T 1
| #define SIZEOF_UINT_FAST8_T 1
| #define SIZEOF_INT16_T 2
| #define SIZEOF_UINT16_T 2
| #define SIZEOF_INT_LEAST16_T 2
| #define SIZEOF_UINT_LEAST16_T 2
| #define SIZEOF_INT_FAST16_T 4
| #define SIZEOF_UINT_FAST16_T 4
| #define SIZEOF_INT32_T 4
| #define SIZEOF_UINT32_T 4
| #define SIZEOF_INT_LEAST32_T 4
| #define SIZEOF_UINT_LEAST32_T 4
| #define SIZEOF_INT_FAST32_T 4
| #define SIZEOF_UINT_FAST32_T 4
| #define SIZEOF_INT64_T 8
| #define SIZEOF_UINT64_T 8
| #define SIZEOF_INT_LEAST64_T 8
| #define SIZEOF_UINT_LEAST64_T 8
| #define SIZEOF_INT_FAST64_T 8
| #define SIZEOF_UINT_FAST64_T 8
| #define SIZEOF_SIZE_T 4
| #define SIZEOF_SSIZE_T 4
| #include <sys/types.h> /*for off_t definition*/
| #define SIZEOF_OFF_T 8
| #define SIZEOF_OFF64_T 8
| #define DEV_T_IS_SCALAR 1
| #define HAVE_ZLIB_H 1
| #define HAVE_LIBZ 1
| #define HAVE_FILTER_DEFLATE 1
| #define HAVE_TM_GMTOFF 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_TIMEZONE 1
| #define GETTIMEOFDAY_GIVES_TZ 1
| #define HAVE_STAT_ST_BLOCKS 1
| /* end confdefs.h. */
| /* Define gettextinfo to an innocuous variant, in case <limits.h> declares
gettextinfo.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define gettextinfo innocuous_gettextinfo
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char gettextinfo (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef gettextinfo
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char gettextinfo ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub_gettextinfo || defined __stub___gettextinfo
| choke me
| #endif
|
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| return gettextinfo ();
| ;
| return 0;
| }
configure:45420: result: no
configure:45332: checking for GetConsoleScreenBufferInfo
configure:45396: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
/tmp/ccMe7K2M.o: In function `main':
conftest.c:(.text+0x12): undefined reference to `GetConsoleScreenBufferInfo'
collect2: ld returned 1 exit status
configure:45402: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TIMEB_H 1
| #define HAVE_LSEEK64 1
| #define HAVE_FTRUNCATE64 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_STAT64 1
| #define HAVE_FSTAT64 1
| #define SIZEOF_CHAR 1
| #define SIZEOF_SHORT 2
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 4
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF___INT64 0
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 12
| #include <sys/types.h>
| #include <stdint.h>
| #define SIZEOF_INT8_T 1
| #define SIZEOF_UINT8_T 1
| #define SIZEOF_INT_LEAST8_T 1
| #define SIZEOF_UINT_LEAST8_T 1
| #define SIZEOF_INT_FAST8_T 1
| #define SIZEOF_UINT_FAST8_T 1
| #define SIZEOF_INT16_T 2
| #define SIZEOF_UINT16_T 2
| #define SIZEOF_INT_LEAST16_T 2
| #define SIZEOF_UINT_LEAST16_T 2
| #define SIZEOF_INT_FAST16_T 4
| #define SIZEOF_UINT_FAST16_T 4
| #define SIZEOF_INT32_T 4
| #define SIZEOF_UINT32_T 4
| #define SIZEOF_INT_LEAST32_T 4
| #define SIZEOF_UINT_LEAST32_T 4
| #define SIZEOF_INT_FAST32_T 4
| #define SIZEOF_UINT_FAST32_T 4
| #define SIZEOF_INT64_T 8
| #define SIZEOF_UINT64_T 8
| #define SIZEOF_INT_LEAST64_T 8
| #define SIZEOF_UINT_LEAST64_T 8
| #define SIZEOF_INT_FAST64_T 8
| #define SIZEOF_UINT_FAST64_T 8
| #define SIZEOF_SIZE_T 4
| #define SIZEOF_SSIZE_T 4
| #include <sys/types.h> /*for off_t definition*/
| #define SIZEOF_OFF_T 8
| #define SIZEOF_OFF64_T 8
| #define DEV_T_IS_SCALAR 1
| #define HAVE_ZLIB_H 1
| #define HAVE_LIBZ 1
| #define HAVE_FILTER_DEFLATE 1
| #define HAVE_TM_GMTOFF 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_TIMEZONE 1
| #define GETTIMEOFDAY_GIVES_TZ 1
| #define HAVE_STAT_ST_BLOCKS 1
| /* end confdefs.h. */
| /* Define GetConsoleScreenBufferInfo to an innocuous variant, in case
<limits.h> declares GetConsoleScreenBufferInfo.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define GetConsoleScreenBufferInfo innocuous_GetConsoleScreenBufferInfo
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char GetConsoleScreenBufferInfo (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef GetConsoleScreenBufferInfo
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char GetConsoleScreenBufferInfo ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub_GetConsoleScreenBufferInfo || defined
__stub___GetConsoleScreenBufferInfo
| choke me
| #endif
|
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| return GetConsoleScreenBufferInfo ();
| ;
| return 0;
| }
configure:45420: result: no
configure:45435: checking for _scrsize
configure:45499: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
/tmp/ccuO5mN4.o: In function `main':
conftest.c:(.text+0x12): undefined reference to `_scrsize'
collect2: ld returned 1 exit status
configure:45505: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TIMEB_H 1
| #define HAVE_LSEEK64 1
| #define HAVE_FTRUNCATE64 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_STAT64 1
| #define HAVE_FSTAT64 1
| #define SIZEOF_CHAR 1
| #define SIZEOF_SHORT 2
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 4
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF___INT64 0
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 12
| #include <sys/types.h>
| #include <stdint.h>
| #define SIZEOF_INT8_T 1
| #define SIZEOF_UINT8_T 1
| #define SIZEOF_INT_LEAST8_T 1
| #define SIZEOF_UINT_LEAST8_T 1
| #define SIZEOF_INT_FAST8_T 1
| #define SIZEOF_UINT_FAST8_T 1
| #define SIZEOF_INT16_T 2
| #define SIZEOF_UINT16_T 2
| #define SIZEOF_INT_LEAST16_T 2
| #define SIZEOF_UINT_LEAST16_T 2
| #define SIZEOF_INT_FAST16_T 4
| #define SIZEOF_UINT_FAST16_T 4
| #define SIZEOF_INT32_T 4
| #define SIZEOF_UINT32_T 4
| #define SIZEOF_INT_LEAST32_T 4
| #define SIZEOF_UINT_LEAST32_T 4
| #define SIZEOF_INT_FAST32_T 4
| #define SIZEOF_UINT_FAST32_T 4
| #define SIZEOF_INT64_T 8
| #define SIZEOF_UINT64_T 8
| #define SIZEOF_INT_LEAST64_T 8
| #define SIZEOF_UINT_LEAST64_T 8
| #define SIZEOF_INT_FAST64_T 8
| #define SIZEOF_UINT_FAST64_T 8
| #define SIZEOF_SIZE_T 4
| #define SIZEOF_SSIZE_T 4
| #include <sys/types.h> /*for off_t definition*/
| #define SIZEOF_OFF_T 8
| #define SIZEOF_OFF64_T 8
| #define DEV_T_IS_SCALAR 1
| #define HAVE_ZLIB_H 1
| #define HAVE_LIBZ 1
| #define HAVE_FILTER_DEFLATE 1
| #define HAVE_TM_GMTOFF 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_TIMEZONE 1
| #define GETTIMEOFDAY_GIVES_TZ 1
| #define HAVE_STAT_ST_BLOCKS 1
| /* end confdefs.h. */
| /* Define _scrsize to an innocuous variant, in case <limits.h> declares
_scrsize.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define _scrsize innocuous__scrsize
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char _scrsize (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef _scrsize
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char _scrsize ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub__scrsize || defined __stub____scrsize
| choke me
| #endif
|
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| return _scrsize ();
| ;
| return 0;
| }
configure:45523: result: no
configure:45435: checking for ioctl
configure:45499: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:45505: $? = 0
configure:45523: result: yes
configure:45534: checking for struct videoconfig
configure:45565: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/usr/local/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:108: error: storage size of 'w' isn't known
configure:45571: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TIMEB_H 1
| #define HAVE_LSEEK64 1
| #define HAVE_FTRUNCATE64 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_STAT64 1
| #define HAVE_FSTAT64 1
| #define SIZEOF_CHAR 1
| #define SIZEOF_SHORT 2
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 4
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF___INT64 0
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 12
| #include <sys/types.h>
| #include <stdint.h>
| #define SIZEOF_INT8_T 1
| #define SIZEOF_UINT8_T 1
| #define SIZEOF_INT_LEAST8_T 1
| #define SIZEOF_UINT_LEAST8_T 1
| #define SIZEOF_INT_FAST8_T 1
| #define SIZEOF_UINT_FAST8_T 1
| #define SIZEOF_INT16_T 2
| #define SIZEOF_UINT16_T 2
| #define SIZEOF_INT_LEAST16_T 2
| #define SIZEOF_UINT_LEAST16_T 2
| #define SIZEOF_INT_FAST16_T 4
| #define SIZEOF_UINT_FAST16_T 4
| #define SIZEOF_INT32_T 4
| #define SIZEOF_UINT32_T 4
| #define SIZEOF_INT_LEAST32_T 4
| #define SIZEOF_UINT_LEAST32_T 4
| #define SIZEOF_INT_FAST32_T 4
| #define SIZEOF_UINT_FAST32_T 4
| #define SIZEOF_INT64_T 8
| #define SIZEOF_UINT64_T 8
| #define SIZEOF_INT_LEAST64_T 8
| #define SIZEOF_UINT_LEAST64_T 8
| #define SIZEOF_INT_FAST64_T 8
| #define SIZEOF_UINT_FAST64_T 8
| #define SIZEOF_SIZE_T 4
| #define SIZEOF_SSIZE_T 4
| #include <sys/types.h> /*for off_t definition*/
| #define SIZEOF_OFF_T 8
| #define SIZEOF_OFF64_T 8
| #define DEV_T_IS_SCALAR 1
| #define HAVE_ZLIB_H 1
| #define HAVE_LIBZ 1
| #define HAVE_FILTER_DEFLATE 1
| #define HAVE_TM_GMTOFF 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_TIMEZONE 1
| #define GETTIMEOFDAY_GIVES_TZ 1
| #define HAVE_STAT_ST_BLOCKS 1
| #define HAVE_IOCTL 1
| /* end confdefs.h. */
|
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| struct videoconfig w; w.numtextcols=0;
| ;
| return 0;
| }
configure:45587: result: no
configure:45593: checking for struct text_info
configure:45624: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/usr/local/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:108: error: storage size of 'w' isn't known
configure:45630: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TIMEB_H 1
| #define HAVE_LSEEK64 1
| #define HAVE_FTRUNCATE64 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_STAT64 1
| #define HAVE_FSTAT64 1
| #define SIZEOF_CHAR 1
| #define SIZEOF_SHORT 2
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 4
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF___INT64 0
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 12
| #include <sys/types.h>
| #include <stdint.h>
| #define SIZEOF_INT8_T 1
| #define SIZEOF_UINT8_T 1
| #define SIZEOF_INT_LEAST8_T 1
| #define SIZEOF_UINT_LEAST8_T 1
| #define SIZEOF_INT_FAST8_T 1
| #define SIZEOF_UINT_FAST8_T 1
| #define SIZEOF_INT16_T 2
| #define SIZEOF_UINT16_T 2
| #define SIZEOF_INT_LEAST16_T 2
| #define SIZEOF_UINT_LEAST16_T 2
| #define SIZEOF_INT_FAST16_T 4
| #define SIZEOF_UINT_FAST16_T 4
| #define SIZEOF_INT32_T 4
| #define SIZEOF_UINT32_T 4
| #define SIZEOF_INT_LEAST32_T 4
| #define SIZEOF_UINT_LEAST32_T 4
| #define SIZEOF_INT_FAST32_T 4
| #define SIZEOF_UINT_FAST32_T 4
| #define SIZEOF_INT64_T 8
| #define SIZEOF_UINT64_T 8
| #define SIZEOF_INT_LEAST64_T 8
| #define SIZEOF_UINT_LEAST64_T 8
| #define SIZEOF_INT_FAST64_T 8
| #define SIZEOF_UINT_FAST64_T 8
| #define SIZEOF_SIZE_T 4
| #define SIZEOF_SSIZE_T 4
| #include <sys/types.h> /*for off_t definition*/
| #define SIZEOF_OFF_T 8
| #define SIZEOF_OFF64_T 8
| #define DEV_T_IS_SCALAR 1
| #define HAVE_ZLIB_H 1
| #define HAVE_LIBZ 1
| #define HAVE_FILTER_DEFLATE 1
| #define HAVE_TM_GMTOFF 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_TIMEZONE 1
| #define GETTIMEOFDAY_GIVES_TZ 1
| #define HAVE_STAT_ST_BLOCKS 1
| #define HAVE_IOCTL 1
| /* end confdefs.h. */
|
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| struct text_info w; w.screenwidth=0;
| ;
| return 0;
| }
configure:45646: result: no
configure:45652: checking for TIOCGWINSZ
configure:45683: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/usr/local/include conftest.c >&5
configure:45689: $? = 0
configure:45699: result: yes
configure:45711: checking for TIOCGETD
configure:45742: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/usr/local/include conftest.c >&5
configure:45748: $? = 0
configure:45758: result: yes
configure:45781: checking for alarm
configure:45845: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:45851: $? = 0
configure:45869: result: yes
configure:45781: checking for fork
configure:45845: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
conftest.c:122: warning: conflicting types for built-in function 'fork'
configure:45851: $? = 0
configure:45869: result: yes
configure:45781: checking for frexpf
configure:45845: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
conftest.c:123: warning: conflicting types for built-in function 'frexpf'
configure:45851: $? = 0
configure:45869: result: yes
configure:45781: checking for frexpl
configure:45845: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
conftest.c:124: warning: conflicting types for built-in function 'frexpl'
configure:45851: $? = 0
configure:45869: result: yes
configure:45781: checking for gethostname
configure:45845: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:45851: $? = 0
configure:45869: result: yes
configure:45781: checking for getpwuid
configure:45845: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:45851: $? = 0
configure:45869: result: yes
configure:45781: checking for getrusage
configure:45845: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:45851: $? = 0
configure:45869: result: yes
configure:45887: checking for BSDgettimeofday
configure:45951: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
/tmp/ccaCKk6p.o: In function `main':
conftest.c:(.text+0x12): undefined reference to `BSDgettimeofday'
collect2: ld returned 1 exit status
configure:45957: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TIMEB_H 1
| #define HAVE_LSEEK64 1
| #define HAVE_FTRUNCATE64 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_STAT64 1
| #define HAVE_FSTAT64 1
| #define SIZEOF_CHAR 1
| #define SIZEOF_SHORT 2
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 4
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF___INT64 0
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 12
| #include <sys/types.h>
| #include <stdint.h>
| #define SIZEOF_INT8_T 1
| #define SIZEOF_UINT8_T 1
| #define SIZEOF_INT_LEAST8_T 1
| #define SIZEOF_UINT_LEAST8_T 1
| #define SIZEOF_INT_FAST8_T 1
| #define SIZEOF_UINT_FAST8_T 1
| #define SIZEOF_INT16_T 2
| #define SIZEOF_UINT16_T 2
| #define SIZEOF_INT_LEAST16_T 2
| #define SIZEOF_UINT_LEAST16_T 2
| #define SIZEOF_INT_FAST16_T 4
| #define SIZEOF_UINT_FAST16_T 4
| #define SIZEOF_INT32_T 4
| #define SIZEOF_UINT32_T 4
| #define SIZEOF_INT_LEAST32_T 4
| #define SIZEOF_UINT_LEAST32_T 4
| #define SIZEOF_INT_FAST32_T 4
| #define SIZEOF_UINT_FAST32_T 4
| #define SIZEOF_INT64_T 8
| #define SIZEOF_UINT64_T 8
| #define SIZEOF_INT_LEAST64_T 8
| #define SIZEOF_UINT_LEAST64_T 8
| #define SIZEOF_INT_FAST64_T 8
| #define SIZEOF_UINT_FAST64_T 8
| #define SIZEOF_SIZE_T 4
| #define SIZEOF_SSIZE_T 4
| #include <sys/types.h> /*for off_t definition*/
| #define SIZEOF_OFF_T 8
| #define SIZEOF_OFF64_T 8
| #define DEV_T_IS_SCALAR 1
| #define HAVE_ZLIB_H 1
| #define HAVE_LIBZ 1
| #define HAVE_FILTER_DEFLATE 1
| #define HAVE_TM_GMTOFF 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_TIMEZONE 1
| #define GETTIMEOFDAY_GIVES_TZ 1
| #define HAVE_STAT_ST_BLOCKS 1
| #define HAVE_IOCTL 1
| #define HAVE_TIOCGWINSZ 1
| #define HAVE_TIOCGETD 1
| #define HAVE_ALARM 1
| #define HAVE_FORK 1
| #define HAVE_FREXPF 1
| #define HAVE_FREXPL 1
| #define HAVE_GETHOSTNAME 1
| #define HAVE_GETPWUID 1
| #define HAVE_GETRUSAGE 1
| /* end confdefs.h. */
| /* Define BSDgettimeofday to an innocuous variant, in case <limits.h>
declares BSDgettimeofday.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define BSDgettimeofday innocuous_BSDgettimeofday
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char BSDgettimeofday (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef BSDgettimeofday
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char BSDgettimeofday ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub_BSDgettimeofday || defined __stub___BSDgettimeofday
| choke me
| #endif
|
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| return BSDgettimeofday ();
| ;
| return 0;
| }
configure:45975: result: no
configure:45887: checking for siglongjmp
configure:45951: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:45957: $? = 0
configure:45975: result: yes
configure:45887: checking for longjmp
configure:45951: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:45957: $? = 0
configure:45975: result: yes
configure:45887: checking for setsysinfo
configure:45951: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
/tmp/ccKRCvm2.o: In function `main':
conftest.c:(.text+0x12): undefined reference to `setsysinfo'
collect2: ld returned 1 exit status
configure:45957: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TIMEB_H 1
| #define HAVE_LSEEK64 1
| #define HAVE_FTRUNCATE64 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_STAT64 1
| #define HAVE_FSTAT64 1
| #define SIZEOF_CHAR 1
| #define SIZEOF_SHORT 2
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 4
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF___INT64 0
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 12
| #include <sys/types.h>
| #include <stdint.h>
| #define SIZEOF_INT8_T 1
| #define SIZEOF_UINT8_T 1
| #define SIZEOF_INT_LEAST8_T 1
| #define SIZEOF_UINT_LEAST8_T 1
| #define SIZEOF_INT_FAST8_T 1
| #define SIZEOF_UINT_FAST8_T 1
| #define SIZEOF_INT16_T 2
| #define SIZEOF_UINT16_T 2
| #define SIZEOF_INT_LEAST16_T 2
| #define SIZEOF_UINT_LEAST16_T 2
| #define SIZEOF_INT_FAST16_T 4
| #define SIZEOF_UINT_FAST16_T 4
| #define SIZEOF_INT32_T 4
| #define SIZEOF_UINT32_T 4
| #define SIZEOF_INT_LEAST32_T 4
| #define SIZEOF_UINT_LEAST32_T 4
| #define SIZEOF_INT_FAST32_T 4
| #define SIZEOF_UINT_FAST32_T 4
| #define SIZEOF_INT64_T 8
| #define SIZEOF_UINT64_T 8
| #define SIZEOF_INT_LEAST64_T 8
| #define SIZEOF_UINT_LEAST64_T 8
| #define SIZEOF_INT_FAST64_T 8
| #define SIZEOF_UINT_FAST64_T 8
| #define SIZEOF_SIZE_T 4
| #define SIZEOF_SSIZE_T 4
| #include <sys/types.h> /*for off_t definition*/
| #define SIZEOF_OFF_T 8
| #define SIZEOF_OFF64_T 8
| #define DEV_T_IS_SCALAR 1
| #define HAVE_ZLIB_H 1
| #define HAVE_LIBZ 1
| #define HAVE_FILTER_DEFLATE 1
| #define HAVE_TM_GMTOFF 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_TIMEZONE 1
| #define GETTIMEOFDAY_GIVES_TZ 1
| #define HAVE_STAT_ST_BLOCKS 1
| #define HAVE_IOCTL 1
| #define HAVE_TIOCGWINSZ 1
| #define HAVE_TIOCGETD 1
| #define HAVE_ALARM 1
| #define HAVE_FORK 1
| #define HAVE_FREXPF 1
| #define HAVE_FREXPL 1
| #define HAVE_GETHOSTNAME 1
| #define HAVE_GETPWUID 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_SIGLONGJMP 1
| #define HAVE_LONGJMP 1
| /* end confdefs.h. */
| /* Define setsysinfo to an innocuous variant, in case <limits.h> declares
setsysinfo.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define setsysinfo innocuous_setsysinfo
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char setsysinfo (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef setsysinfo
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char setsysinfo ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub_setsysinfo || defined __stub___setsysinfo
| choke me
| #endif
|
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| return setsysinfo ();
| ;
| return 0;
| }
configure:45975: result: no
configure:45887: checking for sigaction
configure:45951: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:45957: $? = 0
configure:45975: result: yes
configure:45994: checking for signal
configure:46058: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:46064: $? = 0
configure:46082: result: yes
configure:45994: checking for snprintf
configure:46058: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
conftest.c:132: warning: conflicting types for built-in function 'snprintf'
configure:46064: $? = 0
configure:46082: result: yes
configure:45994: checking for vasprintf
configure:46058: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:46064: $? = 0
configure:46082: result: yes
configure:45994: checking for strdup
configure:46058: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
conftest.c:134: warning: conflicting types for built-in function 'strdup'
configure:46064: $? = 0
configure:46082: result: yes
configure:45994: checking for system
configure:46058: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:46064: $? = 0
configure:46082: result: yes
configure:45994: checking for waitpid
configure:46058: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:46064: $? = 0
configure:46082: result: yes
configure:46098: checking for rand_r
configure:46162: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:46168: $? = 0
configure:46186: result: yes
configure:46098: checking for random
configure:46162: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:46168: $? = 0
configure:46186: result: yes
configure:46098: checking for srandom
configure:46162: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:46168: $? = 0
configure:46186: result: yes
configure:46200: checking for tmpfile
configure:46264: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:46270: $? = 0
configure:46288: result: yes
configure:46303: checking for vsnprintf
configure:46367: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
conftest.c:141: warning: conflicting types for built-in function 'vsnprintf'
configure:46373: $? = 0
configure:46391: result: yes
configure:46397: checking if vsnprintf returns correct value
configure:46446: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:46449: $? = 0
configure:46455: ./conftest
configure:46458: $? = 0
configure:46477: result: yes
configure:46493: checking if lone colon can be used as an argument
configure:46515: result: yes
configure:46520: checking for an ANSI C-conforming const
configure:46603: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/usr/local/include conftest.c >&5
configure:46609: $? = 0
configure:46624: result: yes
configure:46634: checking for inline
configure:46660: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/usr/local/include conftest.c >&5
configure:46666: $? = 0
configure:46684: result: inline
configure:46704: checking for __attribute__ extension
configure:46735: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/usr/local/include conftest.c >&5
configure:46741: $? = 0
configure:46751: result: yes
configure:46762: checking for __func__ extension
configure:46793: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/usr/local/include conftest.c >&5
configure:46799: $? = 0
configure:46809: result: yes
configure:46820: checking for __FUNCTION__ extension
configure:46851: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/usr/local/include conftest.c >&5
configure:46857: $? = 0
configure:46867: result: yes
configure:46878: checking for C99 designated initialization support
configure:46917: gcc -c -D_BSD_SOURCE -D_POSIX_SOURCE -D_FILE_OFFSET_BITS=64
-D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/usr/local/include conftest.c >&5
configure:46923: $? = 0
configure:46933: result: yes
configure:46945: checking how to print long long
configure:46983: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
conftest.c: In function 'main':
conftest.c:133: warning: format '%ld' expects type 'long int', but argument 3
has type 'long long int'
configure:46986: $? = 0
configure:46992: ./conftest
configure:46995: $? = 255
configure: program exited with status 255
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TIMEB_H 1
| #define HAVE_LSEEK64 1
| #define HAVE_FTRUNCATE64 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_STAT64 1
| #define HAVE_FSTAT64 1
| #define SIZEOF_CHAR 1
| #define SIZEOF_SHORT 2
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 4
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF___INT64 0
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 12
| #include <sys/types.h>
| #include <stdint.h>
| #define SIZEOF_INT8_T 1
| #define SIZEOF_UINT8_T 1
| #define SIZEOF_INT_LEAST8_T 1
| #define SIZEOF_UINT_LEAST8_T 1
| #define SIZEOF_INT_FAST8_T 1
| #define SIZEOF_UINT_FAST8_T 1
| #define SIZEOF_INT16_T 2
| #define SIZEOF_UINT16_T 2
| #define SIZEOF_INT_LEAST16_T 2
| #define SIZEOF_UINT_LEAST16_T 2
| #define SIZEOF_INT_FAST16_T 4
| #define SIZEOF_UINT_FAST16_T 4
| #define SIZEOF_INT32_T 4
| #define SIZEOF_UINT32_T 4
| #define SIZEOF_INT_LEAST32_T 4
| #define SIZEOF_UINT_LEAST32_T 4
| #define SIZEOF_INT_FAST32_T 4
| #define SIZEOF_UINT_FAST32_T 4
| #define SIZEOF_INT64_T 8
| #define SIZEOF_UINT64_T 8
| #define SIZEOF_INT_LEAST64_T 8
| #define SIZEOF_UINT_LEAST64_T 8
| #define SIZEOF_INT_FAST64_T 8
| #define SIZEOF_UINT_FAST64_T 8
| #define SIZEOF_SIZE_T 4
| #define SIZEOF_SSIZE_T 4
| #include <sys/types.h> /*for off_t definition*/
| #define SIZEOF_OFF_T 8
| #define SIZEOF_OFF64_T 8
| #define DEV_T_IS_SCALAR 1
| #define HAVE_ZLIB_H 1
| #define HAVE_LIBZ 1
| #define HAVE_FILTER_DEFLATE 1
| #define HAVE_TM_GMTOFF 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_TIMEZONE 1
| #define GETTIMEOFDAY_GIVES_TZ 1
| #define HAVE_STAT_ST_BLOCKS 1
| #define HAVE_IOCTL 1
| #define HAVE_TIOCGWINSZ 1
| #define HAVE_TIOCGETD 1
| #define HAVE_ALARM 1
| #define HAVE_FORK 1
| #define HAVE_FREXPF 1
| #define HAVE_FREXPL 1
| #define HAVE_GETHOSTNAME 1
| #define HAVE_GETPWUID 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_SIGLONGJMP 1
| #define HAVE_LONGJMP 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGNAL 1
| #define HAVE_SNPRINTF 1
| #define HAVE_VASPRINTF 1
| #define HAVE_STRDUP 1
| #define HAVE_SYSTEM 1
| #define HAVE_WAITPID 1
| #define HAVE_RAND_R 1
| #define HAVE_RANDOM 1
| #define HAVE_SRANDOM 1
| #define HAVE_TMPFILE 1
| #define HAVE_VSNPRINTF 1
| #define VSNPRINTF_WORKS 1
| #define HAVE_ATTRIBUTE 1
| #define HAVE_C99_FUNC 1
| #define HAVE_FUNCTION 1
| #define HAVE_C99_DESIGNATED_INITIALIZER 1
| /* end confdefs.h. */
|
| #include <stdio.h>
| #include <stdlib.h>
| #include <string.h>
|
| int main(void)
| {
| char *s = malloc(128);
| long long x = (long long)1048576 * (long long)1048576;
| sprintf(s,"%ld",x);
| exit(strcmp(s,"1099511627776"));
| }
|
configure:46983: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:46986: $? = 0
configure:46992: ./conftest
configure:46995: $? = 0
configure:47011: result: %lld and %llu
configure:47019: checking Threads support system scope
configure:47060: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
configure:47063: $? = 0
configure:47069: ./conftest
configure:47072: $? = 0
configure:47096: result: yes
configure:47320: checking for gpfs
configure:47322: result: suppressed
configure:47327: checking for debug flags
configure:47359: result: none
configure:47376: checking whether function stack tracking is enabled
configure:47397: result: no
configure:47402: checking whether metadata trace file code is enabled
configure:47423: result: no
configure:47429: checking for API tracing
configure:47453: result: no
configure:47461: checking for instrumented library
configure:47489: result: no
configure:47496: checking whether to clear file buffers
configure:47507: result: yes
configure:47523: checking whether a memory checking tool will be used
configure:47544: result: no
configure:47652: checking for parallel support files
configure:47656: result: skipped
configure:49559: checking for I/O filters
configure:49571: result: all (shuffle,fletcher32,nbit,scaleoffset)
configure:49631: checking for Default Virtual File Driver definition
configure:49643: result: yes
configure:49667: checking for Direct Virtual File Driver support
configure:49715: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
conftest.c: In function 'main':
conftest.c:139: error: 'O_DIRECT' undeclared (first use in this function)
conftest.c:139: error: (Each undeclared identifier is reported only once
conftest.c:139: error: for each function it appears in.)
conftest.c:140: warning: incompatible implicit declaration of built-in function
'exit'
configure:49718: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TIMEB_H 1
| #define HAVE_LSEEK64 1
| #define HAVE_FTRUNCATE64 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_STAT64 1
| #define HAVE_FSTAT64 1
| #define SIZEOF_CHAR 1
| #define SIZEOF_SHORT 2
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 4
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF___INT64 0
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 12
| #include <sys/types.h>
| #include <stdint.h>
| #define SIZEOF_INT8_T 1
| #define SIZEOF_UINT8_T 1
| #define SIZEOF_INT_LEAST8_T 1
| #define SIZEOF_UINT_LEAST8_T 1
| #define SIZEOF_INT_FAST8_T 1
| #define SIZEOF_UINT_FAST8_T 1
| #define SIZEOF_INT16_T 2
| #define SIZEOF_UINT16_T 2
| #define SIZEOF_INT_LEAST16_T 2
| #define SIZEOF_UINT_LEAST16_T 2
| #define SIZEOF_INT_FAST16_T 4
| #define SIZEOF_UINT_FAST16_T 4
| #define SIZEOF_INT32_T 4
| #define SIZEOF_UINT32_T 4
| #define SIZEOF_INT_LEAST32_T 4
| #define SIZEOF_UINT_LEAST32_T 4
| #define SIZEOF_INT_FAST32_T 4
| #define SIZEOF_UINT_FAST32_T 4
| #define SIZEOF_INT64_T 8
| #define SIZEOF_UINT64_T 8
| #define SIZEOF_INT_LEAST64_T 8
| #define SIZEOF_UINT_LEAST64_T 8
| #define SIZEOF_INT_FAST64_T 8
| #define SIZEOF_UINT_FAST64_T 8
| #define SIZEOF_SIZE_T 4
| #define SIZEOF_SSIZE_T 4
| #include <sys/types.h> /*for off_t definition*/
| #define SIZEOF_OFF_T 8
| #define SIZEOF_OFF64_T 8
| #define DEV_T_IS_SCALAR 1
| #define HAVE_ZLIB_H 1
| #define HAVE_LIBZ 1
| #define HAVE_FILTER_DEFLATE 1
| #define HAVE_TM_GMTOFF 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_TIMEZONE 1
| #define GETTIMEOFDAY_GIVES_TZ 1
| #define HAVE_STAT_ST_BLOCKS 1
| #define HAVE_IOCTL 1
| #define HAVE_TIOCGWINSZ 1
| #define HAVE_TIOCGETD 1
| #define HAVE_ALARM 1
| #define HAVE_FORK 1
| #define HAVE_FREXPF 1
| #define HAVE_FREXPL 1
| #define HAVE_GETHOSTNAME 1
| #define HAVE_GETPWUID 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_SIGLONGJMP 1
| #define HAVE_LONGJMP 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGNAL 1
| #define HAVE_SNPRINTF 1
| #define HAVE_VASPRINTF 1
| #define HAVE_STRDUP 1
| #define HAVE_SYSTEM 1
| #define HAVE_WAITPID 1
| #define HAVE_RAND_R 1
| #define HAVE_RANDOM 1
| #define HAVE_SRANDOM 1
| #define HAVE_TMPFILE 1
| #define HAVE_VSNPRINTF 1
| #define VSNPRINTF_WORKS 1
| #define HAVE_ATTRIBUTE 1
| #define HAVE_C99_FUNC 1
| #define HAVE_FUNCTION 1
| #define HAVE_C99_DESIGNATED_INITIALIZER 1
| #define PRINTF_LL_WIDTH "ll"
| #define SYSTEM_SCOPE_THREADS 1
| #define CLEAR_MEMORY 1
| #define HAVE_FILTER_SHUFFLE 1
| #define HAVE_FILTER_FLETCHER32 1
| #define HAVE_FILTER_NBIT 1
| #define HAVE_FILTER_SCALEOFFSET 1
| #define DEFAULT_VFD H5FD_SEC2
| /* end confdefs.h. */
|
| #include <sys/types.h>
| #include <sys/stat.h>
| #include <fcntl.h>
| int main(void)
| {
| int fid;
| if((fid=open("tst_file", O_CREAT | O_TRUNC | O_DIRECT, 0755))<0)
| exit(1);
| close(fid);
| remove("tst_file");
| exit (0);
| }
configure:49804: result: no
configure:49822: checking whether exception handling functions is checked
during data conversions
configure:49833: result: yes
configure:49845: checking whether data accuracy is guaranteed during data
conversions
configure:49856: result: yes
configure:49868: checking if converting denormalized floating-point values is
possible
configure:49883: result: yes
configure:49890: checking if converting floating-point values to long long is
not working
configure:49908: result: false
configure:49912: checking if the machine has window style path name
configure:49926: result: no
configure:49931: checking if converting from long double to integers is accurate
configure:49951: result: yes
configure:49959: checking if converting from long double to integers works
configure:50011: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
conftest.c: In function 'main':
conftest.c:146: warning: incompatible implicit declaration of built-in function
'malloc'
conftest.c:147: warning: incompatible implicit declaration of built-in function
'memcpy'
conftest.c:156: warning: incompatible implicit declaration of built-in function
'exit'
configure:50014: $? = 0
configure:50020: ./conftest
configure:50023: $? = 0
configure:50048: result: yes
configure:50055: checking if accurately converting from integers to long double
configure:50075: result: yes
configure:50082: checking if accurately converting unsigned long long to
floating-point values
configure:50213: result: yes
configure:50220: checking if accurately roundup converting floating-point to
unsigned long long values
configure:50264: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
conftest.c: In function 'main':
conftest.c:154: warning: incompatible implicit declaration of built-in function
'exit'
configure:50267: $? = 0
configure:50273: ./conftest
configure:50276: $? = 0
configure:50300: result: yes
configure:50307: checking if right maximum converting floating-point to
unsigned long long values
configure:50358: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
conftest.c: In function 'main':
conftest.c:162: warning: incompatible implicit declaration of built-in function
'exit'
configure:50361: $? = 0
configure:50367: ./conftest
configure:50370: $? = 1
configure: program exited with status 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.8.3"
| #define PACKAGE_STRING "HDF5 1.8.3"
| #define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
| #define PACKAGE "hdf5"
| #define VERSION "1.8.3"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define STDC_HEADERS 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_DIFFTIME 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_SYS_IOCTL_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_SETJMP_H 1
| #define HAVE_FEATURES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TIMEB_H 1
| #define HAVE_LSEEK64 1
| #define HAVE_FTRUNCATE64 1
| #define HAVE_FSEEKO 1
| #define HAVE_FTELLO 1
| #define HAVE_STAT64 1
| #define HAVE_FSTAT64 1
| #define SIZEOF_CHAR 1
| #define SIZEOF_SHORT 2
| #define SIZEOF_INT 4
| #define SIZEOF_LONG 4
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF___INT64 0
| #define SIZEOF_FLOAT 4
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_LONG_DOUBLE 12
| #include <sys/types.h>
| #include <stdint.h>
| #define SIZEOF_INT8_T 1
| #define SIZEOF_UINT8_T 1
| #define SIZEOF_INT_LEAST8_T 1
| #define SIZEOF_UINT_LEAST8_T 1
| #define SIZEOF_INT_FAST8_T 1
| #define SIZEOF_UINT_FAST8_T 1
| #define SIZEOF_INT16_T 2
| #define SIZEOF_UINT16_T 2
| #define SIZEOF_INT_LEAST16_T 2
| #define SIZEOF_UINT_LEAST16_T 2
| #define SIZEOF_INT_FAST16_T 4
| #define SIZEOF_UINT_FAST16_T 4
| #define SIZEOF_INT32_T 4
| #define SIZEOF_UINT32_T 4
| #define SIZEOF_INT_LEAST32_T 4
| #define SIZEOF_UINT_LEAST32_T 4
| #define SIZEOF_INT_FAST32_T 4
| #define SIZEOF_UINT_FAST32_T 4
| #define SIZEOF_INT64_T 8
| #define SIZEOF_UINT64_T 8
| #define SIZEOF_INT_LEAST64_T 8
| #define SIZEOF_UINT_LEAST64_T 8
| #define SIZEOF_INT_FAST64_T 8
| #define SIZEOF_UINT_FAST64_T 8
| #define SIZEOF_SIZE_T 4
| #define SIZEOF_SSIZE_T 4
| #include <sys/types.h> /*for off_t definition*/
| #define SIZEOF_OFF_T 8
| #define SIZEOF_OFF64_T 8
| #define DEV_T_IS_SCALAR 1
| #define HAVE_ZLIB_H 1
| #define HAVE_LIBZ 1
| #define HAVE_FILTER_DEFLATE 1
| #define HAVE_TM_GMTOFF 1
| #define HAVE_STRUCT_TM_TM_ZONE 1
| #define HAVE_TM_ZONE 1
| #define HAVE_STRUCT_TIMEZONE 1
| #define GETTIMEOFDAY_GIVES_TZ 1
| #define HAVE_STAT_ST_BLOCKS 1
| #define HAVE_IOCTL 1
| #define HAVE_TIOCGWINSZ 1
| #define HAVE_TIOCGETD 1
| #define HAVE_ALARM 1
| #define HAVE_FORK 1
| #define HAVE_FREXPF 1
| #define HAVE_FREXPL 1
| #define HAVE_GETHOSTNAME 1
| #define HAVE_GETPWUID 1
| #define HAVE_GETRUSAGE 1
| #define HAVE_SIGLONGJMP 1
| #define HAVE_LONGJMP 1
| #define HAVE_SIGACTION 1
| #define HAVE_SIGNAL 1
| #define HAVE_SNPRINTF 1
| #define HAVE_VASPRINTF 1
| #define HAVE_STRDUP 1
| #define HAVE_SYSTEM 1
| #define HAVE_WAITPID 1
| #define HAVE_RAND_R 1
| #define HAVE_RANDOM 1
| #define HAVE_SRANDOM 1
| #define HAVE_TMPFILE 1
| #define HAVE_VSNPRINTF 1
| #define VSNPRINTF_WORKS 1
| #define HAVE_ATTRIBUTE 1
| #define HAVE_C99_FUNC 1
| #define HAVE_FUNCTION 1
| #define HAVE_C99_DESIGNATED_INITIALIZER 1
| #define PRINTF_LL_WIDTH "ll"
| #define SYSTEM_SCOPE_THREADS 1
| #define CLEAR_MEMORY 1
| #define HAVE_FILTER_SHUFFLE 1
| #define HAVE_FILTER_FLETCHER32 1
| #define HAVE_FILTER_NBIT 1
| #define HAVE_FILTER_SCALEOFFSET 1
| #define DEFAULT_VFD H5FD_SEC2
| #define WANT_DCONV_EXCEPTION 1
| #define WANT_DATA_ACCURACY 1
| #define CONVERT_DENORMAL_FLOAT 1
| #define LDOUBLE_TO_INTEGER_ACCURATE 1
| #define LDOUBLE_TO_INTEGER_WORKS 1
| #define INTEGER_TO_LDOUBLE_ACCURATE 1
| #define ULONG_TO_FP_BOTTOM_BIT_ACCURATE 1
| #define FP_TO_ULLONG_ACCURATE 1
| /* end confdefs.h. */
|
| int main(void)
| {
| float f = 9701917572145405952.00f;
| double d1 = 9701917572145405952.00L;
| long double d2 = 9701917572145405952.00L;
| double d3 = 2e40L;
| unsigned long long l1 = (unsigned long long)f;
| unsigned long long l2 = (unsigned long long)d1;
| unsigned long long l3 = (unsigned long long)d2;
| unsigned long long l4;
| unsigned long long l5 = 0x7fffffffffffffffULL;
| int ret = 0;
|
| if(l1 <= l5 || l2 <= l5 || l3 <= l5)
| ret = 1;
|
| l4 = (unsigned long long)d3;
| if(l4 <= l5)
| ret = 1;
|
| done:
| exit(ret);
| }
|
configure:50397: result: no
configure:50401: checking if correctly converting long double to unsigned int
values
configure:50445: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
conftest.c: In function 'main':
conftest.c:148: warning: this decimal constant is unsigned only in ISO C90
conftest.c:148: warning: this decimal constant is unsigned only in ISO C90
conftest.c:148: warning: this decimal constant is unsigned only in ISO C90
conftest.c:152: warning: incompatible implicit declaration of built-in function
'exit'
configure:50448: $? = 0
configure:50454: ./conftest
configure:50457: $? = 0
configure:50482: result: yes
configure:50489: checking if compiling unsigned long long to floating-point
typecasts work
configure:50504: result: yes
configure:50511: checking if compiling long long to floating-point typecasts
work
configure:50526: result: yes
configure:50533: checking if converting unsigned long long to long double with
precision
configure:50634: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
conftest.c: In function 'main':
conftest.c:165: warning: incompatible implicit declaration of built-in function
'calloc'
conftest.c:166: warning: incompatible implicit declaration of built-in function
'memcpy'
conftest.c:174: warning: incompatible implicit declaration of built-in function
'memset'
conftest.c:207: warning: incompatible implicit declaration of built-in function
'free'
conftest.c:212: warning: incompatible implicit declaration of built-in function
'exit'
configure:50637: $? = 0
configure:50643: ./conftest
configure:50646: $? = 0
configure:50671: result: yes
configure:50678: checking if overflows normally converting floating-point to
integer values
configure:50716: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
conftest.c: In function 'main':
conftest.c:153: warning: incompatible implicit declaration of built-in function
'exit'
configure:50719: $? = 0
configure:50725: ./conftest
configure:50728: $? = 0
configure:50752: result: yes
configure:50759: checking if correctly converting long double to (unsigned)
long long values
configure:50826: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
conftest.c: In function 'main':
conftest.c:159: warning: incompatible implicit declaration of built-in function
'memcpy'
conftest.c:175: warning: integer constant is too large for 'long' type
conftest.c:175: warning: integer constant is too large for 'long' type
conftest.c:180: warning: incompatible implicit declaration of built-in function
'exit'
configure:50829: $? = 0
configure:50835: ./conftest
configure:50838: $? = 0
configure:50863: result: yes
configure:50870: checking if correctly converting (unsigned) long long to long
double values
configure:50941: gcc -o conftest -D_BSD_SOURCE -D_POSIX_SOURCE
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE
-I/usr/local/include -L/usr/local/lib conftest.c -lz -lm >&5
conftest.c: In function 'main':
conftest.c:159: warning: incompatible implicit declaration of built-in function
'memcpy'
conftest.c:168: warning: incompatible implicit declaration of built-in function
'memcpy'
conftest.c:178: warning: incompatible implicit declaration of built-in function
'memcpy'
conftest.c:185: warning: incompatible implicit declaration of built-in function
'exit'
configure:50944: $? = 0
configure:50950: ./conftest
configure:50953: $? = 0
configure:50978: result: yes
configure:50985: checking if bad code for log2 routine is generated
configure:51003: result: no
configure:51100: checking if high level library is enabled
configure:51122: checking additional programs should be built
configure:51147: checking if deprecated public symbols are available
configure:51159: result: yes
configure:51177: checking which version of public symbols to use by default
configure:51198: result: v18
configure:51215: checking Whether to perform strict file format checks
configure:51243: result: no
configure:51250: checking Whether to have library information embedded in the
executables
configure:51261: result: yes
configure:51274: checking if alignment restrictions are strictly enforced
configure:51345: gcc -o conftest -I/usr/local/include -D_LARGEFILE_SOURCE
-D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE -D_BSD_SOURCE
-L/usr/local/lib conftest.c -lz -lm >&5
configure:51348: $? = 0
configure:51354: ./conftest
configure:51357: $? = 0
configure:51365: result: no
configure:51668: creating ./config.status
## ---------------------- ##
## Running config.status. ##
## ---------------------- ##
This file was extended by HDF5 config.status 1.8.3, which was
generated by GNU Autoconf 2.61. Invocation command line was
CONFIG_FILES =
CONFIG_HEADERS =
CONFIG_LINKS =
CONFIG_COMMANDS =
$ ./config.status
on javier-laptop
config.status:1128: creating src/libhdf5.settings
config.status:1128: creating Makefile
config.status:1128: creating src/Makefile
config.status:1128: creating test/Makefile
config.status:1128: creating test/testerror.sh
config.status:1128: creating testpar/Makefile
config.status:1128: creating testpar/testph5.sh
config.status:1128: creating perform/Makefile
config.status:1128: creating tools/Makefile
config.status:1128: creating tools/h5dump/Makefile
config.status:1128: creating tools/h5dump/testh5dump.sh
config.status:1128: creating tools/h5dump/testh5dumpxml.sh
config.status:1128: creating tools/h5ls/testh5ls.sh
config.status:1128: creating tools/h5import/Makefile
config.status:1128: creating tools/h5diff/Makefile
config.status:1128: creating tools/h5jam/Makefile
config.status:1128: creating tools/h5jam/testh5jam.sh
config.status:1128: creating tools/h5repack/Makefile
config.status:1128: creating tools/h5repack/h5repack.sh
config.status:1128: creating tools/h5ls/Makefile
config.status:1128: creating tools/h5copy/Makefile
config.status:1128: creating tools/lib/Makefile
config.status:1128: creating tools/misc/Makefile
config.status:1128: creating tools/misc/h5cc
config.status:1128: creating tools/misc/testh5repart.sh
config.status:1128: creating tools/h5stat/testh5stat.sh
config.status:1128: creating tools/h5stat/Makefile
config.status:1128: creating examples/Makefile
config.status:1128: creating examples/testh5cc.sh
config.status:1128: creating c++/Makefile
config.status:1128: creating c++/src/Makefile
config.status:1128: creating c++/src/h5c++
config.status:1128: creating c++/test/Makefile
config.status:1128: creating c++/examples/Makefile
config.status:1128: creating c++/examples/testh5c++.sh
config.status:1128: creating fortran/Makefile
config.status:1128: creating fortran/src/h5fc
config.status:1128: creating fortran/src/Makefile
config.status:1128: creating fortran/test/Makefile
config.status:1128: creating fortran/testpar/Makefile
config.status:1128: creating fortran/examples/Makefile
config.status:1128: creating fortran/examples/testh5fc.sh
config.status:1128: creating hl/Makefile
config.status:1128: creating hl/src/Makefile
config.status:1128: creating hl/test/Makefile
config.status:1128: creating hl/tools/Makefile
config.status:1128: creating hl/tools/gif2h5/Makefile
config.status:1128: creating hl/examples/Makefile
config.status:1128: creating hl/c++/Makefile
config.status:1128: creating hl/c++/src/Makefile
config.status:1128: creating hl/c++/test/Makefile
config.status:1128: creating hl/c++/examples/Makefile
config.status:1128: creating hl/fortran/Makefile
config.status:1128: creating hl/fortran/src/Makefile
config.status:1128: creating hl/fortran/test/Makefile
config.status:1128: creating hl/fortran/examples/Makefile
config.status:1128: creating src/H5config.h
config.status:1544: executing default-1 commands
config.status:1544: executing depfiles commands
config.status:1544: executing libtool commands
## ---------------- ##
## Cache variables. ##
## ---------------- ##
ac_cv_build=i686-pc-linux-gnu
ac_cv_c_bigendian=no
ac_cv_c_compiler_gnu=yes
ac_cv_c_const=yes
ac_cv_c_inline=inline
ac_cv_cxx_compiler_gnu=yes
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=
ac_cv_env_CC_value=
ac_cv_env_CFLAGS_set=
ac_cv_env_CFLAGS_value=
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=
ac_cv_env_CXXFLAGS_value=
ac_cv_env_CXX_set=
ac_cv_env_CXX_value=
ac_cv_env_FCFLAGS_set=
ac_cv_env_FCFLAGS_value=
ac_cv_env_FC_set=
ac_cv_env_FC_value=
ac_cv_env_LDFLAGS_set=
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_fc_compiler_gnu=no
ac_cv_func_BSDgettimeofday=no
ac_cv_func_GetConsoleScreenBufferInfo=no
ac_cv_func__getvideoconfig=no
ac_cv_func__scrsize=no
ac_cv_func_alarm=yes
ac_cv_func_compress2=yes
ac_cv_func_difftime=yes
ac_cv_func_dlopen=no
ac_cv_func_fork=yes
ac_cv_func_frexpf=yes
ac_cv_func_frexpl=yes
ac_cv_func_fseek64=no
ac_cv_func_fseeko=yes
ac_cv_func_fstat64=yes
ac_cv_func_ftello=yes
ac_cv_func_ftruncate64=yes
ac_cv_func_gethostname=yes
ac_cv_func_getpwuid=yes
ac_cv_func_getrusage=yes
ac_cv_func_gettextinfo=no
ac_cv_func_gettimeofday=yes
ac_cv_func_ioctl=yes
ac_cv_func_longjmp=yes
ac_cv_func_lseek64=yes
ac_cv_func_rand_r=yes
ac_cv_func_random=yes
ac_cv_func_setsysinfo=no
ac_cv_func_shl_load=no
ac_cv_func_sigaction=yes
ac_cv_func_siglongjmp=yes
ac_cv_func_signal=yes
ac_cv_func_snprintf=yes
ac_cv_func_srandom=yes
ac_cv_func_stat64=yes
ac_cv_func_strdup=yes
ac_cv_func_system=yes
ac_cv_func_tmpfile=yes
ac_cv_func_vasprintf=yes
ac_cv_func_vsnprintf=yes
ac_cv_func_waitpid=yes
ac_cv_header_dlfcn_h=yes
ac_cv_header_features_h=yes
ac_cv_header_inttypes_h=yes
ac_cv_header_io_h=no
ac_cv_header_memory_h=yes
ac_cv_header_setjmp_h=yes
ac_cv_header_stdc=yes
ac_cv_header_stddef_h=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_ioctl_h=yes
ac_cv_header_sys_resource_h=yes
ac_cv_header_sys_socket_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_time_h=yes
ac_cv_header_sys_timeb_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_time=yes
ac_cv_header_unistd_h=yes
ac_cv_header_winsock_h=no
ac_cv_header_zlib_h=yes
ac_cv_host=i686-pc-linux-gnu
ac_cv_lib_dl_dlopen=yes
ac_cv_lib_dld_shl_load=no
ac_cv_lib_m_ceil=yes
ac_cv_lib_z_compress2=yes
ac_cv_member_struct_tm_tm_zone=yes
ac_cv_objext=o
ac_cv_path_EGREP='/bin/grep -E'
ac_cv_path_FGREP='/bin/grep -F'
ac_cv_path_GREP=/bin/grep
ac_cv_path_SED=/bin/sed
ac_cv_path_TR=/usr/bin/tr
ac_cv_path_install='/usr/bin/install -c'
ac_cv_path_mkdir=/bin/mkdir
ac_cv_prog_AR=ar
ac_cv_prog_AWK=mawk
ac_cv_prog_CPP='gcc -E'
ac_cv_prog_CXXCPP='g++ -E'
ac_cv_prog_PERL=perl
ac_cv_prog_ac_ct_CC=gcc
ac_cv_prog_ac_ct_OBJDUMP=objdump
ac_cv_prog_ac_ct_RANLIB=ranlib
ac_cv_prog_ac_ct_STRIP=strip
ac_cv_prog_cc_c89=
ac_cv_prog_cc_g=yes
ac_cv_prog_cxx_g=yes
ac_cv_prog_fc_g=no
ac_cv_prog_make_make_set=yes
ac_cv_sizeof___int64=0
ac_cv_sizeof_char=1
ac_cv_sizeof_double=8
ac_cv_sizeof_float=4
ac_cv_sizeof_int16_t=2
ac_cv_sizeof_int32_t=4
ac_cv_sizeof_int64_t=8
ac_cv_sizeof_int8_t=1
ac_cv_sizeof_int=4
ac_cv_sizeof_int_fast16_t=4
ac_cv_sizeof_int_fast32_t=4
ac_cv_sizeof_int_fast64_t=8
ac_cv_sizeof_int_fast8_t=1
ac_cv_sizeof_int_least16_t=2
ac_cv_sizeof_int_least32_t=4
ac_cv_sizeof_int_least64_t=8
ac_cv_sizeof_int_least8_t=1
ac_cv_sizeof_long=4
ac_cv_sizeof_long_double=12
ac_cv_sizeof_long_long=8
ac_cv_sizeof_off64_t=8
ac_cv_sizeof_off_t=8
ac_cv_sizeof_short=2
ac_cv_sizeof_size_t=4
ac_cv_sizeof_ssize_t=4
ac_cv_sizeof_uint16_t=2
ac_cv_sizeof_uint32_t=4
ac_cv_sizeof_uint64_t=8
ac_cv_sizeof_uint8_t=1
ac_cv_sizeof_uint_fast16_t=4
ac_cv_sizeof_uint_fast32_t=4
ac_cv_sizeof_uint_fast64_t=8
ac_cv_sizeof_uint_fast8_t=1
ac_cv_sizeof_uint_least16_t=2
ac_cv_sizeof_uint_least32_t=4
ac_cv_sizeof_uint_least64_t=8
ac_cv_sizeof_uint_least8_t=1
ac_cv_struct_tm=time.h
ac_cv_type___int64=no
ac_cv_type_char=yes
ac_cv_type_double=yes
ac_cv_type_float=yes
ac_cv_type_int16_t=yes
ac_cv_type_int32_t=yes
ac_cv_type_int64_t=yes
ac_cv_type_int8_t=yes
ac_cv_type_int=yes
ac_cv_type_int_fast16_t=yes
ac_cv_type_int_fast32_t=yes
ac_cv_type_int_fast64_t=yes
ac_cv_type_int_fast8_t=yes
ac_cv_type_int_least16_t=yes
ac_cv_type_int_least32_t=yes
ac_cv_type_int_least64_t=yes
ac_cv_type_int_least8_t=yes
ac_cv_type_long=yes
ac_cv_type_long_double=yes
ac_cv_type_long_long=yes
ac_cv_type_off64_t=yes
ac_cv_type_off_t=yes
ac_cv_type_short=yes
ac_cv_type_size_t=yes
ac_cv_type_ssize_t=yes
ac_cv_type_uint16_t=yes
ac_cv_type_uint32_t=yes
ac_cv_type_uint64_t=yes
ac_cv_type_uint8_t=yes
ac_cv_type_uint_fast16_t=yes
ac_cv_type_uint_fast32_t=yes
ac_cv_type_uint_fast64_t=yes
ac_cv_type_uint_fast8_t=yes
ac_cv_type_uint_least16_t=yes
ac_cv_type_uint_least32_t=yes
ac_cv_type_uint_least64_t=yes
ac_cv_type_uint_least8_t=yes
am_cv_CC_dependencies_compiler_type=gcc3
am_cv_CXX_dependencies_compiler_type=gcc3
hdf5_cv_bad_log2_code_generated=no
hdf5_cv_convert_denormal_float=yes
hdf5_cv_convert_float_llong_not_works=no
hdf5_cv_fp_to_integer_overflow_works=yes
hdf5_cv_gettimeofday_tz=yes
hdf5_cv_host=i686-pc-linux-gnu
hdf5_cv_integer_to_ldouble_accurate=yes
hdf5_cv_ldouble_to_integer_accurate=yes
hdf5_cv_llong_to_fp_cast_works=yes
hdf5_cv_lone_colon=yes
hdf5_cv_printf_ll=ll
hdf5_cv_system_scope_threads=yes
hdf5_cv_ullong_to_fp_cast_works=yes
hdf5_cv_ullong_to_ldouble_precision=yes
hdf5_cv_ulong_to_fp_bottom_bit_accurate=yes
hdf5_cv_vsnprintf_works=yes
lt_cv_deplibs_check_method=pass_all
lt_cv_dlopen=dlopen
lt_cv_dlopen_libs=-ldl
lt_cv_dlopen_self=yes
lt_cv_dlopen_self_static=no
lt_cv_file_magic_cmd='$MAGIC_CMD'
lt_cv_file_magic_test_file=
lt_cv_ld_reload_flag=-r
lt_cv_nm_interface='BSD nm'
lt_cv_objdir=.libs
lt_cv_path_LD=/usr/bin/ld
lt_cv_path_LDCXX=/usr/bin/ld
lt_cv_path_NM='/usr/bin/nm -B'
lt_cv_prog_compiler_c_o=yes
lt_cv_prog_compiler_c_o_CXX=yes
lt_cv_prog_compiler_c_o_FC=no
lt_cv_prog_compiler_pic_works=yes
lt_cv_prog_compiler_pic_works_CXX=yes
lt_cv_prog_compiler_rtti_exceptions=no
lt_cv_prog_compiler_static_works=yes
lt_cv_prog_compiler_static_works_CXX=yes
lt_cv_prog_compiler_static_works_FC=no
lt_cv_prog_gnu_ld=yes
lt_cv_prog_gnu_ldcxx=yes
lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[
]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][
]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'''
lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\) $/
{\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/
{"\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^
]*\) $/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \(lib[^
]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^
]*\)$/ {"lib\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int
\1();/p'\'' -e '\''s/^[ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\'''
lt_cv_sys_max_cmd_len=1572864
## ----------------- ##
## Output variables. ##
## ----------------- ##
ACLOCAL='${SHELL} /home/javier/javier/netcdf/hdf52/bin/missing --run
aclocal-1.10'
ADD_PARALLEL_FILES='no'
AMDEPBACKSLASH='\'
AMDEP_FALSE='#'
AMDEP_TRUE=''
AMTAR='${SHELL} /home/javier/javier/netcdf/hdf52/bin/missing --run tar'
AM_MAKEFLAGS=''
AR='ar'
AUTOCONF='${SHELL} /home/javier/javier/netcdf/hdf52/bin/missing --run autoconf'
AUTOHEADER='${SHELL} /home/javier/javier/netcdf/hdf52/bin/missing --run
autoheader'
AUTOMAKE='${SHELL} /home/javier/javier/netcdf/hdf52/bin/missing --run
automake-1.10'
AWK='mawk'
BUILD_ALL_CONDITIONAL_FALSE=''
BUILD_ALL_CONDITIONAL_TRUE='#'
BUILD_CXX_CONDITIONAL_FALSE=''
BUILD_CXX_CONDITIONAL_TRUE='#'
BUILD_FORTRAN_CONDITIONAL_FALSE=''
BUILD_FORTRAN_CONDITIONAL_TRUE='#'
BUILD_HDF5_HL_CONDITIONAL_FALSE='#'
BUILD_HDF5_HL_CONDITIONAL_TRUE=''
BUILD_PARALLEL_CONDITIONAL_FALSE=''
BUILD_PARALLEL_CONDITIONAL_TRUE='#'
BUILD_SZIP_CONDITIONAL_FALSE=''
BUILD_SZIP_CONDITIONAL_TRUE='#'
BYTESEX='little-endian'
CC='gcc'
CCDEPMODE='depmode=gcc3'
CC_VERSION='/usr/bin/gcc (gcc-4.3.3)'
CFLAGS=''
CLEARFILEBUF='yes'
CODESTACK='no'
CONFIG_DATE='Mon Aug 3 10:16:09 WART 2009'
CONFIG_MODE='production'
CONFIG_USER='javier@javier-laptop'
CPP='gcc -E'
CPPFLAGS='-I/usr/local/include -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE
-D_FILE_OFFSET_BITS=64 -D_POSIX_SOURCE -D_BSD_SOURCE '
CXX='g++'
CXXCPP='g++ -E'
CXXDEPMODE='depmode=gcc3'
CXXFLAGS=''
CXX_SHARED_CONDITIONAL_FALSE=''
CXX_SHARED_CONDITIONAL_TRUE='#'
CYGPATH_W='echo'
DEBUG_PKG=''
DEFAULT_API_VERSION='v18'
DEFS='-DHAVE_CONFIG_H'
DEPDIR='.deps'
DEPRECATED_SYMBOLS='yes'
DIRECT_VFD='no'
DIRECT_VFD_CONDITIONAL_FALSE=''
DIRECT_VFD_CONDITIONAL_TRUE='#'
DSYMUTIL=''
DUMPBIN=''
DYNAMIC_DIRS='-R/usr/local/lib '
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP='/bin/grep -E'
EXEEXT=''
EXTERNAL_FILTERS='deflate(zlib)'
F9XMODEXT=''
F9XMODFLAG=''
F9XSUFFIXFLAG=''
FC='g95'
FCFLAGS=''
FCFLAGS_f90=''
FCLIBS=''
FGREP='/bin/grep -F'
FILTERS='shuffle,fletcher32,nbit,scaleoffset'
FORTRAN_DEFAULT_REALisDBLE_F_FALSE=''
FORTRAN_DEFAULT_REALisDBLE_F_TRUE='#'
FORTRAN_HAVE_SIZEOF_FALSE=''
FORTRAN_HAVE_SIZEOF_TRUE='#'
FORTRAN_SHARED_CONDITIONAL_FALSE=''
FORTRAN_SHARED_CONDITIONAL_TRUE='#'
FSEARCH_DIRS=''
GPFS='no'
GREP='/bin/grep'
H5_CFLAGS='-std=c99 -pedantic -Wall -Wextra -Wundef -Wshadow -Wpointer-arith
-Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings -Wconversion
-Waggregate-return -Wstrict-prototypes -Wmissing-prototypes
-Wmissing-declarations -Wredundant-decls -Wnested-externs -Winline
-Wno-long-long -Wfloat-equal -Wmissing-format-attribute -Wmissing-noreturn
-Wpacked -Wdisabled-optimization -Wformat=2 -Wunreachable-code -Wendif-labels
-Wdeclaration-after-statement -Wold-style-definition -Winvalid-pch
-Wvariadic-macros -Wnonnull -Winit-self -Wmissing-include-dirs -Wswitch-default
-Wswitch-enum -Wunused-macros -Wunsafe-loop-optimizations -Wc++-compat
-Wvolatile-register-var -Wstrict-overflow -Wlogical-op -Wvla -O0
-fomit-frame-pointer -finline-functions'
H5_CPPFLAGS=' -DNDEBUG -UH5_DEBUG_API'
H5_CXXFLAGS=' '
H5_FCFLAGS=' '
H5_LONE_COLON='yes'
H5_VERSION='1.8.3'
HADDR_T=''
HAVE_DMALLOC='no'
HDF5_HL='yes'
HDF5_INTERFACES=''
HDF_CXX='no'
HDF_FORTRAN='no'
HID_T=''
HL='hl'
HL_FOR=''
HSIZE_T=''
HSSIZE_T=''
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
INSTRUMENT='no'
INSTRUMENT_LIBRARY='no'
LD='/usr/bin/ld'
LDFLAGS=' -L/usr/local/lib'
LIBOBJS=''
LIBS=' -lz -lm '
LIBTOOL='$(SHELL) $(top_builddir)/libtool'
LINUX_LFS='yes'
LIPO=''
LL_PATH=''
LN_S='ln -s'
LTLIBOBJS=''
LT_STATIC_EXEC=''
MAINT='#'
MAINTAINER_MODE_FALSE=''
MAINTAINER_MODE_TRUE='#'
MAKEINFO='${SHELL} /home/javier/javier/netcdf/hdf52/bin/missing --run makeinfo'
MPE='no'
MPI_GET_SIZE=''
NM='/usr/bin/nm -B'
NMEDIT=''
OBJDUMP='objdump'
OBJECT_NAMELEN_DEFAULT_F=''
OBJEXT='o'
OTOOL64=''
OTOOL=''
PACKAGE='hdf5'
PACKAGE_BUGREPORT='help@xxxxxxxxxxxx'
PACKAGE_NAME='HDF5'
PACKAGE_STRING='HDF5 1.8.3'
PACKAGE_TARNAME='hdf5'
PACKAGE_VERSION='1.8.3'
PARALLEL='no'
PATH_SEPARATOR=':'
PERL='perl'
PTHREAD=''
RANLIB='ranlib'
ROOT='/home/javier/javier/netcdf/hdf52'
RUNPARALLEL=''
RUNSERIAL=''
R_INTEGER=''
R_LARGE=''
SEARCH='VPATH=$(srcdir) $(top_builddir)/src $(top_srcdir)/src'
SED='/bin/sed'
SETX='set -x'
SET_MAKE=''
SHELL='/bin/bash'
SIZE_T=''
STATIC_EXEC='no'
STATIC_SHARED='static, shared'
STRICT_FORMAT_CHECKS='no'
STRIP='strip'
TESTPARALLEL=''
THREADSAFE='no'
TIME='time'
TR='/usr/bin/tr'
TRACE_API='no'
UNAME_INFO='Linux javier-laptop 2.6.28-14-generic #47-Ubuntu SMP Sat Jul 25
00:28:35 UTC 2009 i686 GNU/Linux'
USE_FILTER_DEFLATE='yes'
USE_FILTER_FLETCHER32='yes'
USE_FILTER_NBIT='yes'
USE_FILTER_SCALEOFFSET='yes'
USE_FILTER_SHUFFLE='yes'
USE_FILTER_SZIP='no'
USINGMEMCHECKER='no'
VERSION='1.8.3'
WORDS_BIGENDIAN='no'
ac_ct_CC='gcc'
ac_ct_CXX=''
ac_ct_DUMPBIN=''
ac_ct_FC=''
am__fastdepCC_FALSE='#'
am__fastdepCC_TRUE=''
am__fastdepCXX_FALSE='#'
am__fastdepCXX_TRUE=''
am__include='include'
am__isrc=''
am__leading_dot='.'
am__quote=''
am__tar='${AMTAR} chof - "$$tardir"'
am__untar='${AMTAR} xf -'
bindir='${exec_prefix}/bin'
build='i686-pc-linux-gnu'
build_alias=''
build_cpu='i686'
build_os='linux-gnu'
build_vendor='pc'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
enable_shared='yes'
enable_static='yes'
exec_prefix='${prefix}'
host='i686-pc-linux-gnu'
host_alias=''
host_cpu='i686'
host_os='linux-gnu'
host_vendor='pc'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
install_sh='$(SHELL) /home/javier/javier/netcdf/hdf52/bin/install-sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
lt_ECHO='echo'
mandir='${datarootdir}/man'
mkdir_p='/bin/mkdir -p'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='/usr/local/hdf5_20'
program_transform_name='s,x,x,'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
sysconfdir='${prefix}/etc'
target_alias=''
## ----------- ##
## confdefs.h. ##
## ----------- ##
#define PACKAGE_NAME "HDF5"
#define PACKAGE_TARNAME "hdf5"
#define PACKAGE_VERSION "1.8.3"
#define PACKAGE_STRING "HDF5 1.8.3"
#define PACKAGE_BUGREPORT "help@xxxxxxxxxxxx"
#define PACKAGE "hdf5"
#define VERSION "1.8.3"
#define STDC_HEADERS 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
#define HAVE_DLFCN_H 1
#define LT_OBJDIR ".libs/"
#define HAVE_LIBM 1
#define STDC_HEADERS 1
#define TIME_WITH_SYS_TIME 1
#define HAVE_DIFFTIME 1
#define HAVE_GETTIMEOFDAY 1
#define HAVE_SYS_RESOURCE_H 1
#define HAVE_SYS_TIME_H 1
#define HAVE_UNISTD_H 1
#define HAVE_SYS_IOCTL_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_SYS_SOCKET_H 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_STDDEF_H 1
#define HAVE_SETJMP_H 1
#define HAVE_FEATURES_H 1
#define HAVE_STDINT_H 1
#define HAVE_SYS_TIMEB_H 1
#define HAVE_LSEEK64 1
#define HAVE_FTRUNCATE64 1
#define HAVE_FSEEKO 1
#define HAVE_FTELLO 1
#define HAVE_STAT64 1
#define HAVE_FSTAT64 1
#define SIZEOF_CHAR 1
#define SIZEOF_SHORT 2
#define SIZEOF_INT 4
#define SIZEOF_LONG 4
#define SIZEOF_LONG_LONG 8
#define SIZEOF___INT64 0
#define SIZEOF_FLOAT 4
#define SIZEOF_DOUBLE 8
#define SIZEOF_LONG_DOUBLE 12
#include <sys/types.h>
#include <stdint.h>
#define SIZEOF_INT8_T 1
#define SIZEOF_UINT8_T 1
#define SIZEOF_INT_LEAST8_T 1
#define SIZEOF_UINT_LEAST8_T 1
#define SIZEOF_INT_FAST8_T 1
#define SIZEOF_UINT_FAST8_T 1
#define SIZEOF_INT16_T 2
#define SIZEOF_UINT16_T 2
#define SIZEOF_INT_LEAST16_T 2
#define SIZEOF_UINT_LEAST16_T 2
#define SIZEOF_INT_FAST16_T 4
#define SIZEOF_UINT_FAST16_T 4
#define SIZEOF_INT32_T 4
#define SIZEOF_UINT32_T 4
#define SIZEOF_INT_LEAST32_T 4
#define SIZEOF_UINT_LEAST32_T 4
#define SIZEOF_INT_FAST32_T 4
#define SIZEOF_UINT_FAST32_T 4
#define SIZEOF_INT64_T 8
#define SIZEOF_UINT64_T 8
#define SIZEOF_INT_LEAST64_T 8
#define SIZEOF_UINT_LEAST64_T 8
#define SIZEOF_INT_FAST64_T 8
#define SIZEOF_UINT_FAST64_T 8
#define SIZEOF_SIZE_T 4
#define SIZEOF_SSIZE_T 4
#include <sys/types.h> /*for off_t definition*/
#define SIZEOF_OFF_T 8
#define SIZEOF_OFF64_T 8
#define DEV_T_IS_SCALAR 1
#define HAVE_ZLIB_H 1
#define HAVE_LIBZ 1
#define HAVE_FILTER_DEFLATE 1
#define HAVE_TM_GMTOFF 1
#define HAVE_STRUCT_TM_TM_ZONE 1
#define HAVE_TM_ZONE 1
#define HAVE_STRUCT_TIMEZONE 1
#define GETTIMEOFDAY_GIVES_TZ 1
#define HAVE_STAT_ST_BLOCKS 1
#define HAVE_IOCTL 1
#define HAVE_TIOCGWINSZ 1
#define HAVE_TIOCGETD 1
#define HAVE_ALARM 1
#define HAVE_FORK 1
#define HAVE_FREXPF 1
#define HAVE_FREXPL 1
#define HAVE_GETHOSTNAME 1
#define HAVE_GETPWUID 1
#define HAVE_GETRUSAGE 1
#define HAVE_SIGLONGJMP 1
#define HAVE_LONGJMP 1
#define HAVE_SIGACTION 1
#define HAVE_SIGNAL 1
#define HAVE_SNPRINTF 1
#define HAVE_VASPRINTF 1
#define HAVE_STRDUP 1
#define HAVE_SYSTEM 1
#define HAVE_WAITPID 1
#define HAVE_RAND_R 1
#define HAVE_RANDOM 1
#define HAVE_SRANDOM 1
#define HAVE_TMPFILE 1
#define HAVE_VSNPRINTF 1
#define VSNPRINTF_WORKS 1
#define HAVE_ATTRIBUTE 1
#define HAVE_C99_FUNC 1
#define HAVE_FUNCTION 1
#define HAVE_C99_DESIGNATED_INITIALIZER 1
#define PRINTF_LL_WIDTH "ll"
#define SYSTEM_SCOPE_THREADS 1
#define CLEAR_MEMORY 1
#define HAVE_FILTER_SHUFFLE 1
#define HAVE_FILTER_FLETCHER32 1
#define HAVE_FILTER_NBIT 1
#define HAVE_FILTER_SCALEOFFSET 1
#define DEFAULT_VFD H5FD_SEC2
#define WANT_DCONV_EXCEPTION 1
#define WANT_DATA_ACCURACY 1
#define CONVERT_DENORMAL_FLOAT 1
#define LDOUBLE_TO_INTEGER_ACCURATE 1
#define LDOUBLE_TO_INTEGER_WORKS 1
#define INTEGER_TO_LDOUBLE_ACCURATE 1
#define ULONG_TO_FP_BOTTOM_BIT_ACCURATE 1
#define FP_TO_ULLONG_ACCURATE 1
#define LDOUBLE_TO_UINT_ACCURATE 1
#define ULLONG_TO_FP_CAST_WORKS 1
#define LLONG_TO_FP_CAST_WORKS 1
#define ULLONG_TO_LDOUBLE_PRECISION 1
#define FP_TO_INTEGER_OVERFLOW_WORKS 1
#define LDOUBLE_TO_LLONG_ACCURATE 1
#define LLONG_TO_LDOUBLE_CORRECT 1
#define INCLUDE_HL 1
#define HAVE_EMBEDDED_LIBINFO 1
#define NO_ALIGNMENT_RESTRICTIONS 1
configure: exit 0
