Hi,
I tried to set the environment variables as you told me Ted:
export CFLAG=-m64
export FFLAG=-m64
Maybe I'm doing it wrong because I keep getting the same error.
Roy I already downloaded the Xcode Development Tools 2.4.0 from that page
because I need the gcc compiler to install the Numpy. Maybe I need something
else?
Thanks for your help.
2011/5/8 Roy Mendelssohn <Roy.Mendelssohn@xxxxxxxx>
> Which Fortran and which C compiler are you using? many of the fortrans for
> the Mac will not work with certain versions of the Apple C compiler. You
> can either use the C compiler and Fortrans from fink, use g95 with the Apple
> C compiler, or if you want to stay with gfortran get the appropriate version
> from http://R.research.att.com/tools/.
>
> -Roy
>
> On May 8, 2011, at 8:14 PM, Victor Muñoz wrote:
>
> > Dear all,
> >
> > I want to install the MMTK. I need the netCDF but when I try to install
> it I get an error. I run the configure command like this:
> >
> > ./configure --prefix=/lib --disable-netcdf-4 --enable-shared
> >
> > and I get this error:
> >
> > checking if Fortran "byte" is C "signed char"... configure: error: Could
> not link conftestf.o and conftest.o
> >
> > I guess that's why I get this other error when running make check
> install:
> >
> > make: *** No rule to make target `check'. Stop.
> >
> > I'm working on a Mac OS X version 10.6.7. I'm trying to install the
> netCDF 4.1.2. At the end of the mail you will find the configure.log file .
> >
> > Thanks for your help.
> >
> > Kind Regards,
> >
> > Victor Muñoz
> >
> >
> ------------------------------------------------------------------------------------------------------------------------------------------
> >
> > This file contains any messages produced by compilers while
> > running configure, to aid debugging if configure makes a mistake.
> >
> > It was created by netCDF configure 4.1.2, which was
> > generated by GNU Autoconf 2.68. Invocation command line was
> >
> > $ ./configure --prefix=/lib --disable-netcdf-4 --enable-shared
> >
> > ## --------- ##
> > ## Platform. ##
> > ## --------- ##
> >
> > hostname = Victor-Munozs-MacBook-Pro.local
> > uname -m = x86_64
> > uname -r = 10.7.3
> > uname -s = Darwin
> > uname -v = Darwin Kernel Version 10.7.3: Sun Mar 6 13:37:56 PST 2011;
> root:xnu-1504.14.2~1/RELEASE_X86_64
> >
> > /usr/bin/uname -p = i386
> > /bin/uname -X = unknown
> >
> > /bin/arch = unknown
> > /usr/bin/arch -k = unknown
> > /usr/convex/getsysinfo = unknown
> > /usr/bin/hostinfo = Mach kernel version:
> > Darwin Kernel Version 10.7.3: Sun Mar 6 13:37:56 PST 2011;
> root:xnu-1504.14.2~1/RELEASE_X86_64
> > Kernel configured for up to 8 processors.
> > 4 processors are physically available.
> > 8 processors are logically available.
> > Processor type: i486 (Intel 80486)
> > Processors active: 0 1 2 3 4 5 6 7
> > Primary memory available: 8.00 gigabytes
> > Default processor set: 55 tasks, 326 threads, 8 processors
> > Load average: 0.27, Mach factor: 7.72
> > /bin/machine = unknown
> > /usr/bin/oslevel = unknown
> > /bin/universe = unknown
> >
> > PATH: /usr/bin
> > PATH: /bin
> > PATH: /usr/sbin
> > PATH: /sbin
> > PATH: /usr/local/bin
> > PATH: /usr/X11/bin
> >
> >
> > ## ----------- ##
> > ## Core tests. ##
> > ## ----------- ##
> >
> > configure:3149: netCDF 4.1.2
> > configure:3189: checking build system type
> > configure:3203: result: x86_64-apple-darwin10.7.3
> > configure:3223: checking host system type
> > configure:3236: result: x86_64-apple-darwin10.7.3
> > configure:3258: checking target system type
> > configure:3271: result: x86_64-apple-darwin10.7.3
> > configure:3322: checking for a BSD-compatible install
> > configure:3390: result: /usr/bin/install -c
> > configure:3401: checking whether build environment is sane
> > configure:3451: result: yes
> > configure:3592: checking for a thread-safe mkdir -p
> > configure:3631: result: ./install-sh -c -d
> > configure:3644: checking for gawk
> > configure:3674: result: no
> > configure:3644: checking for mawk
> > configure:3674: result: no
> > configure:3644: checking for nawk
> > configure:3674: result: no
> > configure:3644: checking for awk
> > configure:3660: found /usr/bin/awk
> > configure:3671: result: awk
> > configure:3682: checking whether make sets $(MAKE)
> > configure:3704: result: yes
> > configure:3788: checking user options
> > configure:3798: checking whether CXX is set to ''
> > configure:3802: result: no
> > configure:3806: checking whether FC is set to ''
> > configure:3810: result: no
> > configure:3814: checking whether F90 is set to ''
> > configure:3818: result: no
> > configure:3822: checking whether a NCIO_MINBLOCKSIZE was specified
> > configure:3832: result: 256
> > configure:3840: checking whether udunits is to be built
> > configure:3849: result: no
> > configure:3852: checking if fsync support is enabled
> > configure:3860: result: yes
> > configure:3869: checking whether extra valgrind tests should be run
> > configure:3877: result: no
> > configure:3900: checking whether libcf is to be built
> > configure:3909: result: no
> > configure:3921: checking whether a location for the HDF4 library was
> specified
> > configure:3929: result:
> > configure:3935: checking whether reading of HDF4 SD files is to be
> enabled
> > configure:3937: result: no
> > configure:3941: checking whether to fetch some sample HDF4 files from
> Unidata ftp site to test HDF4 reading (requires wget)
> > configure:3954: result: no
> > configure:3958: checking whether parallel I/O for classic and 64-bit
> offset files using parallel-netcdf is to be enabled
> > configure:3966: result: no
> > configure:3970: checking whether a location for the parallel-netcdf
> library was specified
> > configure:3979: result: no
> > configure:3990: checking whether new netCDF-4 C++ API is to be built
> > configure:4001: result: no
> > configure:4008: checking whether extra example tests should be run
> > configure:4016: result: no
> > configure:4020: checking whether parallel IO tests should be run
> > configure:4028: result: no
> > configure:4032: checking whether a location for the HDF5 library was
> specified
> > configure:4040: result:
> > configure:4046: checking whether a location for the ZLIB library was
> specified
> > configure:4054: result:
> > configure:4060: checking whether a location for the SZLIB library was
> specified
> > configure:4068: result:
> > configure:4074: checking whether a default chunk size in bytes was
> specified
> > configure:4084: result: 4194304
> > configure:4093: checking whether a maximum per-variable cache size for
> HDF5 was specified
> > configure:4103: result: 67108864
> > configure:4112: checking whether a number of chunks for the default
> per-variable cache was specified
> > configure:4122: result: 10
> > configure:4131: checking whether a default file cache size for HDF5 was
> specified
> > configure:4141: result: 4194304
> > configure:4150: checking whether a default file cache maximum number of
> elements for HDF5 was specified
> > configure:4160: result: 1009
> > configure:4169: checking whether a default cache preemption for HDF5 was
> specified
> > configure:4179: result: 0.75
> > configure:4188: checking whether netCDF-4 logging is enabled
> > configure:4196: result: no
> > configure:4200: checking whether cdmremote client is to be built
> > configure:4210: result: no
> > configure:4227: checking whether DAP client is to be built
> > configure:4235: result: yes
> > configure:4254: checking whether a path for curl-config was specified
> > configure:4257: result: no
> > configure:4265: checking whether a location for curl installation was
> specified
> > configure:4274: result: no
> > configure:4330: checking checking whether a location for curl-config
> found
> > configure:4336: result: curl-config
> > configure:4383: checking whether dap remote testing should be enabled
> (default on)
> > configure:4394: result: yes
> > configure:4419: checking whether the time-consuming dap tests should be
> enabled (default off)
> > configure:4430: result: no
> > configure:4443: checking whether netCDF extra tests should be run
> (developers only)
> > configure:4451: result: no
> > configure:4468: checking whether Fortran compiler(s) should be tested
> during configure
> > configure:4476: result: yes
> > configure:4480: checking whether FFIO will be used
> > configure:4488: result: no
> > configure:4504: checking whether to skip C++, F77, or F90 APIs if
> compiler is broken
> > configure:4512: result: yes
> > configure:4516: checking whether only the C library is desired
> > configure:4524: result: no
> > configure:4543: checking whether examples should be built
> > configure:4551: result: yes
> > configure:4563: checking whether F77 API is desired
> > configure:4572: result: yes
> > configure:4577: checking whether any Fortran API is desired
> > configure:4585: result: yes
> > configure:4590: checking whether F90 API is desired
> > configure:4600: result: yes
> > configure:4604: checking whether fortran type sizes should be checked
> > configure:4612: result: yes
> > configure:4618: checking whether C API is desired
> > configure:4626: result: yes
> > configure:4633: checking where to get netCDF C-only library for separate
> fortran libraries
> > configure:4649: result:
> > configure:4661: checking whether CXX API is desired
> > configure:4670: result: yes
> > configure:4679: checking whether v2 netCDF API should be built
> > configure:4687: result: yes
> > configure:4706: checking whether the ncgen/ncdump/nccopy should be built
> > configure:4715: result: yes
> > configure:4727: checking whether large file (> 2GB) tests should be run
> > configure:4735: result: no
> > configure:4752: checking whether benchmaks should be run (experimental)
> > configure:4760: result: no
> > configure:4772: checking whether extreme numbers should be used in tests
> > configure:4787: result: yes
> > configure:4799: checking where to put large temp files if large file
> tests are run
> > configure:4808: result: .
> > configure:4819: checking whether a win32 DLL is desired
> > configure:4827: result: no
> > configure:4849: checking whether separate fortran libs are desired
> > configure:4857: result: yes
> > configure:4892: finding C compiler
> > configure:4949: checking for xlc
> > configure:4979: result: no
> > configure:4949: checking for cc
> > configure:4965: found /usr/bin/cc
> > configure:4976: result: cc
> > configure:5007: checking for C compiler version
> > configure:5016: cc --version >&5
> > i686-apple-darwin10-gcc-4.2.1 (GCC) 4.2.1 (Apple Inc. build 5666) (dot 3)
> > Copyright (C) 2007 Free Software Foundation, Inc.
> > This is free software; see the source for copying conditions. There is
> NO
> > warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR
> PURPOSE.
> >
> > configure:5027: $? = 0
> > configure:5016: cc -v >&5
> > Using built-in specs.
> > Target: i686-apple-darwin10
> > Configured with: /var/tmp/gcc/gcc-5666.3~6/src/configure
> --disable-checking --enable-werror --prefix=/usr --mandir=/share/man
> --enable-languages=c,objc,c++,obj-c++
> --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib
> --build=i686-apple-darwin10 --program-prefix=i686-apple-darwin10-
> --host=x86_64-apple-darwin10 --target=i686-apple-darwin10
> --with-gxx-include-dir=/include/c++/4.2.1
> > Thread model: posix
> > gcc version 4.2.1 (Apple Inc. build 5666) (dot 3)
> > configure:5027: $? = 0
> > configure:5016: cc -V >&5
> > gcc-4.2: argument to `-V' is missing
> > configure:5027: $? = 1
> > configure:5016: cc -qversion >&5
> > i686-apple-darwin10-gcc-4.2.1: no input files
> > configure:5027: $? = 1
> > configure:5047: checking whether the C compiler works
> > configure:5069: cc conftest.c >&5
> > configure:5073: $? = 0
> > configure:5121: result: yes
> > configure:5124: checking for C compiler default output file name
> > configure:5126: result: a.out
> > configure:5132: checking for suffix of executables
> > configure:5139: cc -o conftest conftest.c >&5
> > configure:5143: $? = 0
> > configure:5165: result:
> > configure:5187: checking whether we are cross compiling
> > configure:5195: cc -o conftest conftest.c >&5
> > configure:5199: $? = 0
> > configure:5206: ./conftest
> > configure:5210: $? = 0
> > configure:5225: result: no
> > configure:5230: checking for suffix of object files
> > configure:5252: cc -c conftest.c >&5
> > configure:5256: $? = 0
> > configure:5277: result: o
> > configure:5281: checking whether we are using the GNU C compiler
> > configure:5300: cc -c conftest.c >&5
> > configure:5300: $? = 0
> > configure:5309: result: yes
> > configure:5318: checking whether cc accepts -g
> > configure:5338: cc -c -g conftest.c >&5
> > configure:5338: $? = 0
> > configure:5379: result: yes
> > configure:5396: checking for cc option to accept ISO C89
> > configure:5460: cc -c -g -O2 conftest.c >&5
> > configure:5460: $? = 0
> > configure:5473: result: none needed
> > configure:5504: checking for style of include used by make
> > configure:5532: result: GNU
> > configure:5557: checking dependency style of cc
> > configure:5667: result: gcc3
> > configure:5686: checking whether cc understands -c and -o together
> > configure:5714: cc -c conftest.c -o conftest2.o >&5
> > configure:5718: $? = 0
> > configure:5724: cc -c conftest.c -o conftest2.o >&5
> > configure:5728: $? = 0
> > configure:5783: result: yes
> > configure:5809: checking for an ANSI C-conforming const
> > configure:5874: cc -c -g -O2 conftest.c >&5
> > configure:5874: $? = 0
> > configure:5881: result: yes
> > configure:5906: cc -c conftest.c >&5
> > configure:5906: $? = 0
> > configure:5912: checking whether a CURLOPT_KEYPASSWD is defined
> > configure:5914: result: yes
> > configure:5943: finding Fortran compiler (will not be used if Fortran API
> is not desired)
> > configure:6223: checking for xlf90
> > configure:6253: result: no
> > configure:6223: checking for fort
> > configure:6253: result: no
> > configure:6223: checking for xlf95
> > configure:6253: result: no
> > configure:6223: checking for ifort
> > configure:6253: result: no
> > configure:6223: checking for ifc
> > configure:6253: result: no
> > configure:6223: checking for efc
> > configure:6253: result: no
> > configure:6223: checking for pgf95
> > configure:6253: result: no
> > configure:6223: checking for lf95
> > configure:6253: result: no
> > configure:6223: checking for g95
> > configure:6253: result: no
> > configure:6223: checking for gfortran
> > configure:6239: found /usr/local/bin/gfortran
> > configure:6250: result: gfortran
> > configure:6276: checking for Fortran compiler version
> > configure:6285: gfortran --version >&5
> > GNU Fortran (GCC) 4.2.3
> > Copyright (C) 2007 Free Software Foundation, Inc.
> >
> > GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
> > You may redistribute copies of GNU Fortran
> > under the terms of the GNU General Public License.
> > For more information about these matters, see the file named COPYING
> >
> > configure:6296: $? = 0
> > configure:6285: gfortran -v >&5
> > Using built-in specs.
> > Target: i686-apple-darwin8
> > Configured with: /Builds/unix/gcc/gcc-4.2/configure --prefix=/usr/local
> --mandir=/share/man --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/
> --build=i686-apple-darwin8 --host=i686-apple-darwin8
> --target=i686-apple-darwin8 --enable-languages=fortran
> > Thread model: posix
> > gcc version 4.2.3
> > configure:6296: $? = 0
> > configure:6285: gfortran -V >&5
> > gfortran: argument to `-V' is missing
> > configure:6296: $? = 1
> > configure:6285: gfortran -qversion >&5
> > i686-apple-darwin8-gfortran-4.2: unrecognized option '-qversion'
> > i686-apple-darwin8-gfortran-4.2: no input files
> > configure:6296: $? = 1
> > configure:6305: checking whether we are using the GNU Fortran compiler
> > configure:6318: gfortran -c conftest.F >&5
> > configure:6318: $? = 0
> > configure:6327: result: yes
> > configure:6333: checking whether gfortran accepts -g
> > configure:6344: gfortran -c -g conftest.f >&5
> > configure:6344: $? = 0
> > configure:6352: result: yes
> > configure:6443: checking for xlf
> > configure:6473: result: no
> > configure:6443: checking for fort
> > configure:6473: result: no
> > configure:6443: checking for xlf95
> > configure:6473: result: no
> > configure:6443: checking for ifort
> > configure:6473: result: no
> > configure:6443: checking for ifc
> > configure:6473: result: no
> > configure:6443: checking for efc
> > configure:6473: result: no
> > configure:6443: checking for pgf77
> > configure:6473: result: no
> > configure:6443: checking for lf95
> > configure:6473: result: no
> > configure:6443: checking for g95
> > configure:6473: result: no
> > configure:6443: checking for gfortran
> > configure:6459: found /usr/local/bin/gfortran
> > configure:6470: result: gfortran
> > configure:6496: checking for Fortran 77 compiler version
> > configure:6505: gfortran --version >&5
> > GNU Fortran (GCC) 4.2.3
> > Copyright (C) 2007 Free Software Foundation, Inc.
> >
> > GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
> > You may redistribute copies of GNU Fortran
> > under the terms of the GNU General Public License.
> > For more information about these matters, see the file named COPYING
> >
> > configure:6516: $? = 0
> > configure:6505: gfortran -v >&5
> > Using built-in specs.
> > Target: i686-apple-darwin8
> > Configured with: /Builds/unix/gcc/gcc-4.2/configure --prefix=/usr/local
> --mandir=/share/man --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/
> --build=i686-apple-darwin8 --host=i686-apple-darwin8
> --target=i686-apple-darwin8 --enable-languages=fortran
> > Thread model: posix
> > gcc version 4.2.3
> > configure:6516: $? = 0
> > configure:6505: gfortran -V >&5
> > gfortran: argument to `-V' is missing
> > configure:6516: $? = 1
> > configure:6505: gfortran -qversion >&5
> > i686-apple-darwin8-gfortran-4.2: unrecognized option '-qversion'
> > i686-apple-darwin8-gfortran-4.2: no input files
> > configure:6516: $? = 1
> > configure:6525: checking whether we are using the GNU Fortran 77 compiler
> > configure:6538: gfortran -c conftest.F >&5
> > configure:6538: $? = 0
> > configure:6547: result: yes
> > configure:6553: checking whether gfortran accepts -g
> > configure:6564: gfortran -c -g conftest.f >&5
> > configure:6564: $? = 0
> > configure:6572: result: yes
> > configure:6618: setting up Fortran 90
> > configure:6637: checking for Fortran flag to compile .f90 files
> > configure:6653: gfortran -c -g -O2 conftest.f90 >&5
> > configure:6653: $? = 0
> > configure:6662: result: none
> > configure:6690: checking fortran 90 modules inclusion flag
> > configure:6715: gfortran -c -g -O2 conftest.f90 >&5
> > configure:6715: $? = 0
> > configure:6732: gfortran -c -g -O2 -Itmpdir_0 conftest.f90 >&5
> > configure:6732: $? = 0
> > configure:6751: result: -I
> > configure:6763: checking if Fortran compiler can handle Fortran-90
> > configure:6771: gfortran -g -O2 conftest.f90
> > configure:6774: $? = 0
> > configure:6786: result: yes
> > configure:6795: finding C++ compiler (will not be used if C++ API is not
> desired)
> > configure:6863: checking for g++
> > configure:6879: found /usr/bin/g++
> > configure:6890: result: g++
> > configure:6917: checking for C++ compiler version
> > configure:6926: g++ --version >&5
> > i686-apple-darwin10-g++-4.2.1 (GCC) 4.2.1 (Apple Inc. build 5666) (dot 3)
> > Copyright (C) 2007 Free Software Foundation, Inc.
> > This is free software; see the source for copying conditions. There is
> NO
> > warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR
> PURPOSE.
> >
> > configure:6937: $? = 0
> > configure:6926: g++ -v >&5
> > Using built-in specs.
> > Target: i686-apple-darwin10
> > Configured with: /var/tmp/gcc/gcc-5666.3~6/src/configure
> --disable-checking --enable-werror --prefix=/usr --mandir=/share/man
> --enable-languages=c,objc,c++,obj-c++
> --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib
> --build=i686-apple-darwin10 --program-prefix=i686-apple-darwin10-
> --host=x86_64-apple-darwin10 --target=i686-apple-darwin10
> --with-gxx-include-dir=/include/c++/4.2.1
> > Thread model: posix
> > gcc version 4.2.1 (Apple Inc. build 5666) (dot 3)
> > configure:6937: $? = 0
> > configure:6926: g++ -V >&5
> > g++-4.2: argument to `-V' is missing
> > configure:6937: $? = 1
> > configure:6926: g++ -qversion >&5
> > i686-apple-darwin10-g++-4.2.1: no input files
> > configure:6937: $? = 1
> > configure:6941: checking whether we are using the GNU C++ compiler
> > configure:6960: g++ -c conftest.cpp >&5
> > configure:6960: $? = 0
> > configure:6969: result: yes
> > configure:6978: checking whether g++ accepts -g
> > configure:6998: g++ -c -g conftest.cpp >&5
> > configure:6998: $? = 0
> > configure:7039: result: yes
> > configure:7064: checking dependency style of g++
> > configure:7174: result: gcc3
> > configure:7245: setting up libtool
> > configure:7294: checking how to print strings
> > configure:7321: result: printf
> > configure:7342: checking for a sed that does not truncate output
> > configure:7406: result: /usr/bin/sed
> > configure:7424: checking for grep that handles long lines and -e
> > configure:7482: result: /usr/bin/grep
> > configure:7487: checking for egrep
> > configure:7549: result: /usr/bin/grep -E
> > configure:7554: checking for fgrep
> > configure:7616: result: /usr/bin/grep -F
> > configure:7651: checking for ld used by cc
> > configure:7718: result: /usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld
> > configure:7725: checking if the linker
> (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) is GNU ld
> > configure:7740: result: no
> > configure:7752: checking for BSD- or MS-compatible name lister (nm)
> > configure:7801: result: /usr/bin/nm
> > configure:7931: checking the name lister (/usr/bin/nm) interface
> > configure:7938: cc -c -g -O2 conftest.c >&5
> > configure:7941: /usr/bin/nm "conftest.o"
> > configure:7944: output
> > 0000000000000188 D _some_variable
> > configure:7951: result: BSD nm
> > configure:7954: checking whether ln -s works
> > configure:7958: result: yes
> > configure:7966: checking the maximum length of command line arguments
> > configure:8091: result: 196608
> > configure:8108: checking whether the shell understands some XSI
> constructs
> > configure:8118: result: yes
> > configure:8122: checking whether the shell understands "+="
> > configure:8128: result: yes
> > configure:8163: checking how to convert x86_64-apple-darwin10.7.3 file
> names to x86_64-apple-darwin10.7.3 format
> > configure:8203: result: func_convert_file_noop
> > configure:8210: checking how to convert x86_64-apple-darwin10.7.3 file
> names to toolchain format
> > configure:8230: result: func_convert_file_noop
> > configure:8237: checking for
> /usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld option to reload object files
> > configure:8244: result: -r
> > configure:8318: checking for objdump
> > configure:8348: result: no
> > configure:8374: checking how to recognize dependent libraries
> > configure:8576: result: pass_all
> > configure:8661: checking for dlltool
> > configure:8691: result: no
> > configure:8718: checking how to associate runtime and link libraries
> > configure:8745: result: printf %s\n
> > configure:8805: checking for ar
> > configure:8821: found /usr/bin/ar
> > configure:8832: result: ar
> > configure:8869: checking for archiver @FILE support
> > configure:8886: cc -c -g -O2 conftest.c >&5
> > configure:8886: $? = 0
> > configure:8889: ar cru libconftest.a @conftest.lst >&5
> > ar: @conftest.lst: No such file or directory
> > configure:8892: $? = 1
> > configure:8912: result: no
> > configure:8970: checking for strip
> > configure:8986: found /usr/bin/strip
> > configure:8997: result: strip
> > configure:9069: checking for ranlib
> > configure:9085: found /usr/bin/ranlib
> > configure:9096: result: ranlib
> > configure:9198: checking command to parse /usr/bin/nm output from cc
> object
> > configure:9317: cc -c -g -O2 conftest.c >&5
> > configure:9320: $? = 0
> > configure:9324: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[
> ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' |
> sed '/ __gnu_lto/d' \> conftest.nm
> > configure:9327: $? = 0
> > cannot find nm_test_var in conftest.nm
> > configure:9317: cc -c -g -O2 conftest.c >&5
> > configure:9320: $? = 0
> > configure:9324: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[
> ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p' |
> sed '/ __gnu_lto/d' \> conftest.nm
> > configure:9327: $? = 0
> > configure:9393: cc -o conftest -g -O2 conftest.c conftstm.o >&5
> > configure:9396: $? = 0
> > configure:9434: result: ok
> > configure:9471: checking for sysroot
> > configure:9501: result: no
> > configure:9744: checking for mt
> > configure:9774: result: no
> > configure:9794: checking if : is a manifest tool
> > configure:9800: : '-?'
> > configure:9808: result: no
> > configure:9864: checking for dsymutil
> > configure:9880: found /usr/bin/dsymutil
> > configure:9891: result: dsymutil
> > configure:9956: checking for nmedit
> > configure:9972: found /usr/bin/nmedit
> > configure:9983: result: nmedit
> > configure:10048: checking for lipo
> > configure:10064: found /usr/bin/lipo
> > configure:10075: result: lipo
> > configure:10140: checking for otool
> > configure:10156: found /usr/bin/otool
> > configure:10167: result: otool
> > configure:10232: checking for otool64
> > configure:10262: result: no
> > configure:10307: checking for -single_module linker flag
> > cc -g -O2 -o libconftest.dylib -dynamiclib -Wl,-single_module conftest.c
> > configure:10334: result: yes
> > configure:10336: checking for -exported_symbols_list linker flag
> > configure:10356: cc -o conftest -g -O2
> -Wl,-exported_symbols_list,conftest.sym conftest.c >&5
> > configure:10356: $? = 0
> > configure:10366: result: yes
> > configure:10368: checking for -force_load linker flag
> > cc -g -O2 -c -o conftest.o conftest.c
> > ar cru libconftest.a conftest.o
> > ranlib libconftest.a
> > cc -g -O2 -o conftest conftest.c -Wl,-force_load,./libconftest.a
> > configure:10398: result: yes
> > configure:10440: checking how to run the C preprocessor
> > configure:10471: cc -E conftest.c
> > configure:10471: $? = 0
> > configure:10485: cc -E conftest.c
> > conftest.c:25:28: error: ac_nonexistent.h: No such file or directory
> > configure:10485: $? = 1
> > configure: failed program was:
> > | /* confdefs.h */
> > | #define PACKAGE_NAME "netCDF"
> > | #define PACKAGE_TARNAME "netcdf"
> > | #define PACKAGE_VERSION "4.1.2"
> > | #define PACKAGE_STRING "netCDF 4.1.2"
> > | #define PACKAGE_BUGREPORT "support-netcdf@xxxxxxxxxxxxxxxx"
> > | #define PACKAGE_URL ""
> > | #define PACKAGE "netcdf"
> > | #define VERSION "4.1.2"
> > | #define NCIO_MINBLOCKSIZE 256
> > | #define USE_FSYNC 1
> > | #define DEFAULT_CHUNK_SIZE 4194304
> > | #define MAX_DEFAULT_CACHE_SIZE 67108864
> > | #define DEFAULT_CHUNKS_IN_CACHE 10
> > | #define CHUNK_CACHE_SIZE 4194304
> > | #define CHUNK_CACHE_NELEMS 1009
> > | #define CHUNK_CACHE_PREEMPTION 0.75
> > | #define USE_DAP 1
> > | #define ENABLE_DAP 1
> > | #define ENABLE_DAP_REMOTE_TESTS 1
> > | #define USE_EXTREME_NUMBERS 1
> > | #define TEMP_LARGE "."
> > | #define HAVE_CURLOPT_KEYPASSWD 1
> > | /* end confdefs.h. */
> > | #include <ac_nonexistent.h>
> > configure:10510: result: cc -E
> > configure:10530: cc -E conftest.c
> > configure:10530: $? = 0
> > configure:10544: cc -E conftest.c
> > conftest.c:25:28: error: ac_nonexistent.h: No such file or directory
> > configure:10544: $? = 1
> > configure: failed program was:
> > | /* confdefs.h */
> > | #define PACKAGE_NAME "netCDF"
> > | #define PACKAGE_TARNAME "netcdf"
> > | #define PACKAGE_VERSION "4.1.2"
> > | #define PACKAGE_STRING "netCDF 4.1.2"
> > | #define PACKAGE_BUGREPORT "support-netcdf@xxxxxxxxxxxxxxxx"
> > | #define PACKAGE_URL ""
> > | #define PACKAGE "netcdf"
> > | #define VERSION "4.1.2"
> > | #define NCIO_MINBLOCKSIZE 256
> > | #define USE_FSYNC 1
> > | #define DEFAULT_CHUNK_SIZE 4194304
> > | #define MAX_DEFAULT_CACHE_SIZE 67108864
> > | #define DEFAULT_CHUNKS_IN_CACHE 10
> > | #define CHUNK_CACHE_SIZE 4194304
> > | #define CHUNK_CACHE_NELEMS 1009
> > | #define CHUNK_CACHE_PREEMPTION 0.75
> > | #define USE_DAP 1
> > | #define ENABLE_DAP 1
> > | #define ENABLE_DAP_REMOTE_TESTS 1
> > | #define USE_EXTREME_NUMBERS 1
> > | #define TEMP_LARGE "."
> > | #define HAVE_CURLOPT_KEYPASSWD 1
> > | /* end confdefs.h. */
> > | #include <ac_nonexistent.h>
> > configure:10573: checking for ANSI C header files
> > configure:10593: cc -c -g -O2 conftest.c >&5
> > configure:10593: $? = 0
> > configure:10666: cc -o conftest -g -O2 conftest.c >&5
> > configure:10666: $? = 0
> > configure:10666: ./conftest
> > configure:10666: $? = 0
> > configure:10677: result: yes
> > configure:10690: checking for sys/types.h
> > configure:10690: cc -c -g -O2 conftest.c >&5
> > configure:10690: $? = 0
> > configure:10690: result: yes
> > configure:10690: checking for sys/stat.h
> > configure:10690: cc -c -g -O2 conftest.c >&5
> > configure:10690: $? = 0
> > configure:10690: result: yes
> > configure:10690: checking for stdlib.h
> > configure:10690: cc -c -g -O2 conftest.c >&5
> > configure:10690: $? = 0
> > configure:10690: result: yes
> > configure:10690: checking for string.h
> > configure:10690: cc -c -g -O2 conftest.c >&5
> > configure:10690: $? = 0
> > configure:10690: result: yes
> > configure:10690: checking for memory.h
> > configure:10690: cc -c -g -O2 conftest.c >&5
> > configure:10690: $? = 0
> > configure:10690: result: yes
> > configure:10690: checking for strings.h
> > configure:10690: cc -c -g -O2 conftest.c >&5
> > configure:10690: $? = 0
> > configure:10690: result: yes
> > configure:10690: checking for inttypes.h
> > configure:10690: cc -c -g -O2 conftest.c >&5
> > configure:10690: $? = 0
> > configure:10690: result: yes
> > configure:10690: checking for stdint.h
> > configure:10690: cc -c -g -O2 conftest.c >&5
> > configure:10690: $? = 0
> > configure:10690: result: yes
> > configure:10690: checking for unistd.h
> > configure:10690: cc -c -g -O2 conftest.c >&5
> > configure:10690: $? = 0
> > configure:10690: result: yes
> > configure:10704: checking for dlfcn.h
> > configure:10704: cc -c -g -O2 conftest.c >&5
> > configure:10704: $? = 0
> > configure:10704: result: yes
> > configure:11201: checking for objdir
> > configure:11216: result: .libs
> > configure:11487: checking if cc supports -fno-rtti -fno-exceptions
> > configure:11505: cc -c -g -O2 -fno-rtti -fno-exceptions conftest.c >&5
> > cc1: warning: command line option "-fno-rtti" is valid for C++/ObjC++ but
> not for C
> > configure:11509: $? = 0
> > configure:11522: result: no
> > configure:11832: checking for cc option to produce PIC
> > configure:11839: result: -fno-common -DPIC
> > configure:11847: checking if cc PIC flag -fno-common -DPIC works
> > configure:11865: cc -c -g -O2 -fno-common -DPIC -DPIC conftest.c >&5
> > configure:11869: $? = 0
> > configure:11882: result: yes
> > configure:11911: checking if cc static flag -static works
> > configure:11939: result: no
> > configure:11954: checking if cc supports -c -o file.o
> > configure:11975: cc -c -g -O2 -o out/conftest2.o conftest.c >&5
> > configure:11979: $? = 0
> > configure:12001: result: yes
> > configure:12009: checking if cc supports -c -o file.o
> > configure:12056: result: yes
> > configure:12089: checking whether the cc linker
> (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries
> > configure:13247: result: yes
> > configure:13492: checking dynamic linker characteristics
> > configure:14228: result: darwin10.7.3 dyld
> > configure:14335: checking how to hardcode library paths into programs
> > configure:14360: result: immediate
> > configure:14900: checking whether stripping libraries is possible
> > configure:14914: result: yes
> > configure:14940: checking if libtool supports shared libraries
> > configure:14942: result: yes
> > configure:14945: checking whether to build shared libraries
> > configure:14966: result: yes
> > configure:14969: checking whether to build static libraries
> > configure:14973: result: yes
> > configure:14996: checking how to run the C++ preprocessor
> > configure:15023: g++ -E conftest.cpp
> > configure:15023: $? = 0
> > configure:15037: g++ -E conftest.cpp
> > conftest.cpp:37:28: error: ac_nonexistent.h: No such file or directory
> > configure:15037: $? = 1
> > configure: failed program was:
> > | /* confdefs.h */
> > | #define PACKAGE_NAME "netCDF"
> > | #define PACKAGE_TARNAME "netcdf"
> > | #define PACKAGE_VERSION "4.1.2"
> > | #define PACKAGE_STRING "netCDF 4.1.2"
> > | #define PACKAGE_BUGREPORT "support-netcdf@xxxxxxxxxxxxxxxx"
> > | #define PACKAGE_URL ""
> > | #define PACKAGE "netcdf"
> > | #define VERSION "4.1.2"
> > | #define NCIO_MINBLOCKSIZE 256
> > | #define USE_FSYNC 1
> > | #define DEFAULT_CHUNK_SIZE 4194304
> > | #define MAX_DEFAULT_CACHE_SIZE 67108864
> > | #define DEFAULT_CHUNKS_IN_CACHE 10
> > | #define CHUNK_CACHE_SIZE 4194304
> > | #define CHUNK_CACHE_NELEMS 1009
> > | #define CHUNK_CACHE_PREEMPTION 0.75
> > | #define USE_DAP 1
> > | #define ENABLE_DAP 1
> > | #define ENABLE_DAP_REMOTE_TESTS 1
> > | #define USE_EXTREME_NUMBERS 1
> > | #define TEMP_LARGE "."
> > | #define HAVE_CURLOPT_KEYPASSWD 1
> > | #define STDC_HEADERS 1
> > | #define HAVE_SYS_TYPES_H 1
> > | #define HAVE_SYS_STAT_H 1
> > | #define HAVE_STDLIB_H 1
> > | #define HAVE_STRING_H 1
> > | #define HAVE_MEMORY_H 1
> > | #define HAVE_STRINGS_H 1
> > | #define HAVE_INTTYPES_H 1
> > | #define HAVE_STDINT_H 1
> > | #define HAVE_UNISTD_H 1
> > | #define HAVE_DLFCN_H 1
> > | #define LT_OBJDIR ".libs/"
> > | /* end confdefs.h. */
> > | #include <ac_nonexistent.h>
> > configure:15062: result: g++ -E
> > configure:15082: g++ -E conftest.cpp
> > configure:15082: $? = 0
> > configure:15096: g++ -E conftest.cpp
> > conftest.cpp:37:28: error: ac_nonexistent.h: No such file or directory
> > configure:15096: $? = 1
> > configure: failed program was:
> > | /* confdefs.h */
> > | #define PACKAGE_NAME "netCDF"
> > | #define PACKAGE_TARNAME "netcdf"
> > | #define PACKAGE_VERSION "4.1.2"
> > | #define PACKAGE_STRING "netCDF 4.1.2"
> > | #define PACKAGE_BUGREPORT "support-netcdf@xxxxxxxxxxxxxxxx"
> > | #define PACKAGE_URL ""
> > | #define PACKAGE "netcdf"
> > | #define VERSION "4.1.2"
> > | #define NCIO_MINBLOCKSIZE 256
> > | #define USE_FSYNC 1
> > | #define DEFAULT_CHUNK_SIZE 4194304
> > | #define MAX_DEFAULT_CACHE_SIZE 67108864
> > | #define DEFAULT_CHUNKS_IN_CACHE 10
> > | #define CHUNK_CACHE_SIZE 4194304
> > | #define CHUNK_CACHE_NELEMS 1009
> > | #define CHUNK_CACHE_PREEMPTION 0.75
> > | #define USE_DAP 1
> > | #define ENABLE_DAP 1
> > | #define ENABLE_DAP_REMOTE_TESTS 1
> > | #define USE_EXTREME_NUMBERS 1
> > | #define TEMP_LARGE "."
> > | #define HAVE_CURLOPT_KEYPASSWD 1
> > | #define STDC_HEADERS 1
> > | #define HAVE_SYS_TYPES_H 1
> > | #define HAVE_SYS_STAT_H 1
> > | #define HAVE_STDLIB_H 1
> > | #define HAVE_STRING_H 1
> > | #define HAVE_MEMORY_H 1
> > | #define HAVE_STRINGS_H 1
> > | #define HAVE_INTTYPES_H 1
> > | #define HAVE_STDINT_H 1
> > | #define HAVE_UNISTD_H 1
> > | #define HAVE_DLFCN_H 1
> > | #define LT_OBJDIR ".libs/"
> > | /* end confdefs.h. */
> > | #include <ac_nonexistent.h>
> > configure:15266: checking for ld used by g++
> > configure:15333: result: /usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld
> > configure:15340: checking if the linker
> (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) is GNU ld
> > configure:15355: result: no
> > configure:15410: checking whether the g++ linker
> (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries
> > configure:16414: result: yes
> > configure:16449: g++ -c -g -O2 conftest.cpp >&5
> > configure:16452: $? = 0
> > configure:16972: checking for g++ option to produce PIC
> > configure:16979: result: -fno-common -DPIC
> > configure:16987: checking if g++ PIC flag -fno-common -DPIC works
> > configure:17005: g++ -c -g -O2 -fno-common -DPIC -DPIC conftest.cpp >&5
> > configure:17009: $? = 0
> > configure:17022: result: yes
> > configure:17045: checking if g++ static flag -static works
> > configure:17073: result: no
> > configure:17085: checking if g++ supports -c -o file.o
> > configure:17106: g++ -c -g -O2 -o out/conftest2.o conftest.cpp >&5
> > configure:17110: $? = 0
> > configure:17132: result: yes
> > configure:17137: checking if g++ supports -c -o file.o
> > configure:17184: result: yes
> > configure:17214: checking whether the g++ linker
> (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries
> > configure:17248: result: yes
> > configure:17391: checking dynamic linker characteristics
> > configure:18061: result: darwin10.7.3 dyld
> > configure:18114: checking how to hardcode library paths into programs
> > configure:18139: result: immediate
> > configure:18288: checking if libtool supports shared libraries
> > configure:18290: result: yes
> > configure:18293: checking whether to build shared libraries
> > configure:18313: result: yes
> > configure:18316: checking whether to build static libraries
> > configure:18320: result: yes
> > configure:18624: checking for gfortran option to produce PIC
> > configure:18631: result: -fno-common
> > configure:18639: checking if gfortran PIC flag -fno-common works
> > configure:18657: gfortran -c -g -O2 -fno-common conftest.f >&5
> > configure:18661: $? = 0
> > configure:18674: result: yes
> > configure:18697: checking if gfortran static flag -static works
> > configure:18725: result: no
> > configure:18737: checking if gfortran supports -c -o file.o
> > configure:18758: gfortran -c -g -O2 -o out/conftest2.o conftest.f >&5
> > configure:18762: $? = 0
> > configure:18784: result: yes
> > configure:18789: checking if gfortran supports -c -o file.o
> > configure:18836: result: yes
> > configure:18866: checking whether the gfortran linker
> (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries
> > configure:19974: result: yes
> > configure:20117: checking dynamic linker characteristics
> > configure:20781: result: darwin10.7.3 dyld
> > configure:20834: checking how to hardcode library paths into programs
> > configure:20859: result: immediate
> > configure:21004: checking if libtool supports shared libraries
> > configure:21006: result: yes
> > configure:21009: checking whether to build shared libraries
> > configure:21029: result: yes
> > configure:21032: checking whether to build static libraries
> > configure:21036: result: yes
> > configure:21069: gfortran -c -g -O2 conftest.f90 >&5
> > configure:21072: $? = 0
> > configure:21484: checking for gfortran option to produce PIC
> > configure:21491: result: -fno-common
> > configure:21499: checking if gfortran PIC flag -fno-common works
> > configure:21517: gfortran -c -g -O2 -fno-common conftest.f90 >&5
> > configure:21521: $? = 0
> > configure:21534: result: yes
> > configure:21557: checking if gfortran static flag -static works
> > configure:21585: result: no
> > configure:21597: checking if gfortran supports -c -o file.o
> > configure:21618: gfortran -c -g -O2 -o out/conftest2.o conftest.f90 >&5
> > configure:21622: $? = 0
> > configure:21644: result: yes
> > configure:21649: checking if gfortran supports -c -o file.o
> > configure:21696: result: yes
> > configure:21726: checking whether the gfortran linker
> (/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries
> > configure:22834: result: yes
> > configure:22977: checking dynamic linker characteristics
> > configure:23641: result: darwin10.7.3 dyld
> > configure:23694: checking how to hardcode library paths into programs
> > configure:23719: result: immediate
> > configure:23778: finding other utilities
> > configure:23784: trying to set fortran flags for this platform
> > configure:23833: checking for special C compiler options needed for large
> files
> > configure:23878: result: no
> > configure:23884: checking for _FILE_OFFSET_BITS value needed for large
> files
> > configure:23909: cc -c -g -O2 conftest.c >&5
> > configure:23909: $? = 0
> > configure:23941: result: no
> > configure:24025: displaying some results
> > configure:24031: checking CPPFLAGS
> > configure:24033: result:
> > configure:24035: checking CC CFLAGS
> > configure:24037: result: cc -g -O2
> > configure:24040: checking type cc
> > configure:24042: result: cc is hashed (/usr/bin/cc)
> > configure:24045: checking CXX
> > configure:24048: result: g++
> > configure:24050: checking CXXFLAGS
> > configure:24052: result: -g -O2
> > configure:24055: checking type g++
> > configure:24057: result: g++ is /usr/bin/g++
> > configure:24064: checking FC
> > configure:24067: result: gfortran
> > configure:24069: checking FFLAGS
> > configure:24071: result: -g -O2
> > configure:24074: checking type gfortran
> > configure:24076: result: gfortran is /usr/local/bin/gfortran
> > configure:24083: checking F90
> > configure:24086: result: gfortran
> > configure:24088: checking FCFLAGS
> > configure:24090: result: -g -O2
> > configure:24093: checking type gfortran
> > configure:24095: result: gfortran is /usr/local/bin/gfortran
> > configure:24102: checking AR
> > configure:24105: result: ar
> > configure:24107: checking AR_FLAGS
> > configure:24109: result: cru
> > configure:24112: checking type ar
> > configure:24114: result: ar is hashed (/usr/bin/ar)
> > configure:24121: checking NM
> > configure:24124: result: /usr/bin/nm
> > configure:24126: checking NMFLAGS
> > configure:24128: result:
> > configure:24200: checking for /usr/bin/nm
> > configure:24227: result: /usr/bin/nm
> > configure:24240: checking nm flags
> > configure:24245: result:
> > configure:24257: checking for C-equivalent to Fortran routine "SUB"
> > configure:24264: gfortran -c -g -O2 conftest.f
> > configure:24267: $? = 0
> > configure:24277: result: sub_
> > configure:24297: checking for Fortran "byte"
> > configure:24305: gfortran -c -g -O2 conftest.f
> > configure:24308: $? = 0
> > configure:24310: result: yes
> > configure:24328: checking for Fortran "integer*2"
> > configure:24336: gfortran -c -g -O2 conftest.f
> > configure:24339: $? = 0
> > configure:24341: result: yes
> > configure:24368: checking if Fortran "byte" is C "signed char"
> > configure:24378: cc -c -g -O2 conftest.c
> > conftest.c: In function 'sub_':
> > conftest.c:4: warning: incompatible implicit declaration of built-in
> function 'exit'
> > configure:24381: $? = 0
> > configure:24384: gfortran -g -O2 -c conftestf.f
> > configure:24387: $? = 0
> > configure:24390: gfortran -o conftest -g -O2 conftestf.o conftest.o
> > ld: warning: in conftest.o, file was built for unsupported file format
> which is not the architecture being linked (i386)
> > Undefined symbols:
> > "_sub_", referenced from:
> > _MAIN__ in conftestf.o
> > ld: symbol(s) not found
> > collect2: ld returned 1 exit status
> > configure:24393: $? = 1
> > configure:24416: error: Could not link conftestf.o and conftest.o
> >
> > ## ---------------- ##
> > ## Cache variables. ##
> > ## ---------------- ##
> >
> > ac_cv_build=x86_64-apple-darwin10.7.3
> > ac_cv_c_compiler_gnu=yes
> > ac_cv_c_const=yes
> > ac_cv_cxx_compiler_gnu=yes
> > ac_cv_env_CCC_set=
> > ac_cv_env_CCC_value=
> > ac_cv_env_CC_set=
> > ac_cv_env_CC_value=
> > ac_cv_env_CFLAGS_set=
> > ac_cv_env_CFLAGS_value=
> > ac_cv_env_CPPFLAGS_set=
> > ac_cv_env_CPPFLAGS_value=
> > ac_cv_env_CPP_set=
> > ac_cv_env_CPP_value=
> > ac_cv_env_CXXCPP_set=
> > ac_cv_env_CXXCPP_value=
> > ac_cv_env_CXXFLAGS_set=
> > ac_cv_env_CXXFLAGS_value=
> > ac_cv_env_CXX_set=
> > ac_cv_env_CXX_value=
> > ac_cv_env_F77_set=
> > ac_cv_env_F77_value=
> > ac_cv_env_FCFLAGS_set=
> > ac_cv_env_FCFLAGS_value=
> > ac_cv_env_FC_set=
> > ac_cv_env_FC_value=
> > ac_cv_env_FFLAGS_set=
> > ac_cv_env_FFLAGS_value=
> > ac_cv_env_LDFLAGS_set=
> > ac_cv_env_LDFLAGS_value=
> > ac_cv_env_LIBS_set=
> > ac_cv_env_LIBS_value=
> > ac_cv_env_build_alias_set=
> > ac_cv_env_build_alias_value=
> > ac_cv_env_host_alias_set=
> > ac_cv_env_host_alias_value=
> > ac_cv_env_target_alias_set=
> > ac_cv_env_target_alias_value=
> > ac_cv_f77_compiler_gnu=yes
> > ac_cv_fc_compiler_gnu=yes
> > ac_cv_fc_srcext_f90=none
> > ac_cv_header_dlfcn_h=yes
> > ac_cv_header_inttypes_h=yes
> > ac_cv_header_memory_h=yes
> > ac_cv_header_stdc=yes
> > ac_cv_header_stdint_h=yes
> > ac_cv_header_stdlib_h=yes
> > ac_cv_header_string_h=yes
> > ac_cv_header_strings_h=yes
> > ac_cv_header_sys_stat_h=yes
> > ac_cv_header_sys_types_h=yes
> > ac_cv_header_unistd_h=yes
> > ac_cv_host=x86_64-apple-darwin10.7.3
> > ac_cv_objext=o
> > ac_cv_path_EGREP='/usr/bin/grep -E'
> > ac_cv_path_FGREP='/usr/bin/grep -F'
> > ac_cv_path_GREP=/usr/bin/grep
> > ac_cv_path_SED=/usr/bin/sed
> > ac_cv_path_install='/usr/bin/install -c'
> > ac_cv_prog_AWK=awk
> > ac_cv_prog_CPP='cc -E'
> > ac_cv_prog_CXXCPP='g++ -E'
> > ac_cv_prog_NM=/usr/bin/nm
> > ac_cv_prog_ac_ct_AR=ar
> > ac_cv_prog_ac_ct_CC=cc
> > ac_cv_prog_ac_ct_CXX=g++
> > ac_cv_prog_ac_ct_DSYMUTIL=dsymutil
> > ac_cv_prog_ac_ct_F77=gfortran
> > ac_cv_prog_ac_ct_FC=gfortran
> > ac_cv_prog_ac_ct_LIPO=lipo
> > ac_cv_prog_ac_ct_NMEDIT=nmedit
> > ac_cv_prog_ac_ct_OTOOL=otool
> > ac_cv_prog_ac_ct_RANLIB=ranlib
> > ac_cv_prog_ac_ct_STRIP=strip
> > ac_cv_prog_cc_c89=
> > ac_cv_prog_cc_cc_c_o=yes
> > ac_cv_prog_cc_g=yes
> > ac_cv_prog_cxx_g=yes
> > ac_cv_prog_f77_g=yes
> > ac_cv_prog_f90_uppercase_mod=no
> > ac_cv_prog_fc_g=yes
> > ac_cv_prog_make_make_set=yes
> > ac_cv_sys_file_offset_bits=no
> > ac_cv_sys_largefile_CC=no
> > ac_cv_target=x86_64-apple-darwin10.7.3
> > am_cv_CC_dependencies_compiler_type=gcc3
> > am_cv_CXX_dependencies_compiler_type=gcc3
> > ax_cv_f90_modflag=-I
> > lt_cv_apple_cc_single_mod=yes
> > lt_cv_ar_at_file=no
> > lt_cv_deplibs_check_method=pass_all
> > lt_cv_file_magic_cmd='$MAGIC_CMD'
> > lt_cv_file_magic_test_file=
> > lt_cv_ld_exported_symbols_list=yes
> > lt_cv_ld_force_load=no
> > lt_cv_ld_reload_flag=-r
> > lt_cv_nm_interface='BSD nm'
> > lt_cv_objdir=.libs
> > lt_cv_path_LD=/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld
> > lt_cv_path_LDCXX=/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld
> > lt_cv_path_NM=/usr/bin/nm
> > lt_cv_path_mainfest_tool=no
> > lt_cv_prog_compiler_c_o=yes
> > lt_cv_prog_compiler_c_o_CXX=yes
> > lt_cv_prog_compiler_c_o_F77=yes
> > lt_cv_prog_compiler_c_o_FC=yes
> > lt_cv_prog_compiler_pic='-fno-common -DPIC'
> > lt_cv_prog_compiler_pic_CXX='-fno-common -DPIC'
> > lt_cv_prog_compiler_pic_F77=-fno-common
> > lt_cv_prog_compiler_pic_FC=-fno-common
> > lt_cv_prog_compiler_pic_works=yes
> > lt_cv_prog_compiler_pic_works_CXX=yes
> > lt_cv_prog_compiler_pic_works_F77=yes
> > lt_cv_prog_compiler_pic_works_FC=yes
> > lt_cv_prog_compiler_rtti_exceptions=no
> > lt_cv_prog_compiler_static_works=no
> > lt_cv_prog_compiler_static_works_CXX=no
> > lt_cv_prog_compiler_static_works_F77=no
> > lt_cv_prog_compiler_static_works_FC=no
> > lt_cv_prog_gnu_ld=no
> > lt_cv_prog_gnu_ldcxx=no
> > lt_cv_sharedlib_from_linklib_cmd='printf %s\n'
> > lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[
> ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1
> _\2 \2/p'\'' | sed '\''/ __gnu_lto/d'\'''
> > lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\)[
> ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \([^
> ]*\)$/ {"\2", (void *) \&\2},/p'\'''
> > lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^:
> \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\)
> \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\)
> \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\'''
> > lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern
> int \1();/p'\'' -e '\''s/^[BCDEGRST]* .* \(.*\)$/extern char \1;/p'\'''
> > lt_cv_sys_max_cmd_len=196608
> > lt_cv_to_host_file_cmd=func_convert_file_noop
> > lt_cv_to_tool_file_cmd=func_convert_file_noop
> >
> > ## ----------------- ##
> > ## Output variables. ##
> > ## ----------------- ##
> >
> > ACLOCAL='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/missing --run
> aclocal-1.11'
> > ALLOCA=''
> > AMDEPBACKSLASH='\'
> > AMDEP_FALSE='#'
> > AMDEP_TRUE=''
> > AMTAR='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/missing --run tar'
> > AR='ar'
> > AS='as'
> > AUTOCONF='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/missing --run
> autoconf'
> > AUTOHEADER='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/missing --run
> autoheader'
> > AUTOMAKE='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/missing --run
> automake-1.11'
> > AWK='awk'
> > BINFILE_NAME=''
> > BUILD_BENCHMARKS_FALSE=''
> > BUILD_BENCHMARKS_TRUE='#'
> > BUILD_CDMREMOTE_FALSE=''
> > BUILD_CDMREMOTE_TRUE=''
> > BUILD_CXX4_FALSE=''
> > BUILD_CXX4_TRUE=''
> > BUILD_CXX_FALSE='#'
> > BUILD_CXX_TRUE=''
> > BUILD_C_FALSE='#'
> > BUILD_C_TRUE=''
> > BUILD_DAP_FALSE=''
> > BUILD_DAP_TRUE=''
> > BUILD_DLL_FALSE=''
> > BUILD_DLL_TRUE='#'
> > BUILD_EXAMPLES_FALSE='#'
> > BUILD_EXAMPLES_TRUE=''
> > BUILD_F77_FALSE='#'
> > BUILD_F77_TRUE=''
> > BUILD_F90_FALSE='#'
> > BUILD_F90_TRUE=''
> > BUILD_LIBCF_FALSE=''
> > BUILD_LIBCF_TRUE=''
> > BUILD_PARALLEL_FALSE=''
> > BUILD_PARALLEL_TRUE=''
> > BUILD_SEPARATE_FORTRAN_FALSE='#'
> > BUILD_SEPARATE_FORTRAN_TRUE=''
> > BUILD_UDUNITS_FALSE=''
> > BUILD_UDUNITS_TRUE=''
> > BUILD_UTILITIES_FALSE='#'
> > BUILD_UTILITIES_TRUE=''
> > BUILD_V2_FALSE='#'
> > BUILD_V2_TRUE=''
> > CC='cc'
> > CCDEPMODE='depmode=gcc3'
> > CFLAGS='-g -O2'
> > CPP='cc -E'
> > CPPFLAGS=''
> > CROSS_COMPILING_FALSE=''
> > CROSS_COMPILING_TRUE=''
> > CURLDIR='/usr'
> > CURL_CFLAGS=''
> > CURL_FCFLAGS=''
> > CURL_FFLAGS=''
> > CURL_LIBS='-lcurl'
> > CXX='g++'
> > CXXCPP='g++ -E'
> > CXXDEPMODE='depmode=gcc3'
> > CXXFLAGS='-g -O2'
> > CYGPATH_W='echo'
> > DEFS=''
> > DEPDIR='.deps'
> > DLLTOOL='false'
> > DSYMUTIL='dsymutil'
> > DUMPBIN=''
> > ECHO_C='\c'
> > ECHO_N=''
> > ECHO_T=''
> > EGREP='/usr/bin/grep -E'
> > ENABLE_DAP_LONG_TESTS_FALSE=''
> > ENABLE_DAP_LONG_TESTS_TRUE=''
> > ENABLE_DAP_REMOTE_TESTS_FALSE=''
> > ENABLE_DAP_REMOTE_TESTS_TRUE=''
> > EXEEXT=''
> > EXTERN_CFLAGS=''
> > EXTERN_CPPFLAGS=''
> > EXTERN_LDFLAGS=''
> > EXTRA_EXAMPLE_TESTS_FALSE=''
> > EXTRA_EXAMPLE_TESTS_TRUE=''
> > EXTRA_TESTS_FALSE=''
> > EXTRA_TESTS_TRUE='#'
> > F77='gfortran'
> > FC='gfortran'
> > FCFLAGS='-g -O2'
> > FCFLAGS_f90=''
> > FFLAGS='-g -O2'
> > FGREP='/usr/bin/grep -F'
> > FTPBINDIR=''
> > GREP='/usr/bin/grep'
> > HAS_CXX=''
> > HAS_DAP=''
> > HAS_F77=''
> > HAS_F90=''
> > HAS_HDF4=''
> > HAS_HDF5=''
> > HAS_NC2=''
> > HAS_NC4=''
> > HAS_PNETCDF=''
> > HAS_SZLIB=''
> > HDF4DIR=''
> > HDF5DIR=''
> > INSTALL_DATA='${INSTALL} -m 644'
> > INSTALL_PROGRAM='${INSTALL}'
> > INSTALL_SCRIPT='${INSTALL}'
> > INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
> > INTERNAL_OCLIB_FALSE='#'
> > INTERNAL_OCLIB_TRUE=''
> > LARGE_FILE_TESTS_FALSE=''
> > LARGE_FILE_TESTS_TRUE='#'
> > LD='/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld'
> > LDFLAGS=''
> > LIBOBJS=''
> > LIBS=''
> > LIBTOOL='$(SHELL) $(top_builddir)/libtool'
> > LIPO='lipo'
> > LN_S='ln -s'
> > LTLIBOBJS=''
> > MAKEINFO='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/missing --run
> makeinfo'
> > MAKEWHATIS_CMD=''
> > MANIFEST_TOOL=':'
> > MKDIR_P='./install-sh -c -d'
> > MOD_FLAG='-I'
> > NC_FLIBS=''
> > NC_LIBS=''
> > NETCDF_C_LIB=''
> > NM='/usr/bin/nm'
> > NMEDIT='nmedit'
> > NMFLAGS=''
> > OBJDUMP='false'
> > OBJEXT='o'
> > OTOOL64=':'
> > OTOOL='otool'
> > PACKAGE='netcdf'
> > PACKAGE_BUGREPORT='support-netcdf@xxxxxxxxxxxxxxxx'
> > PACKAGE_NAME='netCDF'
> > PACKAGE_STRING='netCDF 4.1.2'
> > PACKAGE_TARNAME='netcdf'
> > PACKAGE_URL=''
> > PACKAGE_VERSION='4.1.2'
> > PATH_SEPARATOR=':'
> > PNETCDFDIR=''
> > RANLIB='ranlib'
> > SED='/usr/bin/sed'
> > SET_MAKE=''
> > SHELL='/bin/sh'
> > STRIP='strip'
> > SZLIBDIR=''
> > TEST_F77_FALSE='#'
> > TEST_F77_TRUE=''
> > TEST_PARALLEL_FALSE=''
> > TEST_PARALLEL_TRUE=''
> > UPPER_CASE_MOD_FALSE=''
> > UPPER_CASE_MOD_TRUE=''
> > USE_DAP_FALSE=''
> > USE_DAP_TRUE=''
> > USE_DISPATCH_FALSE=''
> > USE_DISPATCH_TRUE=''
> > USE_FFIO_FALSE=''
> > USE_FFIO_TRUE='#'
> > USE_HDF4_DIR_FALSE=''
> > USE_HDF4_DIR_TRUE=''
> > USE_HDF4_FALSE=''
> > USE_HDF4_FILE_TESTS_FALSE=''
> > USE_HDF4_FILE_TESTS_TRUE=''
> > USE_HDF4_TRUE=''
> > USE_HDF5_DIR_FALSE=''
> > USE_HDF5_DIR_TRUE=''
> > USE_LOGGING_FALSE=''
> > USE_LOGGING_TRUE=''
> > USE_NETCDF4_FALSE=''
> > USE_NETCDF4_TRUE=''
> > USE_NETCDF_C_LIB_DIR_FALSE=''
> > USE_NETCDF_C_LIB_DIR_TRUE='#'
> > USE_PNETCDF_DIR_FALSE=''
> > USE_PNETCDF_DIR_TRUE=''
> > USE_PNETCDF_FALSE=''
> > USE_PNETCDF_TRUE=''
> > USE_RENAMEV3_FALSE=''
> > USE_RENAMEV3_TRUE=''
> > USE_SZIP_FALSE=''
> > USE_SZIP_TRUE=''
> > USE_SZLIB_DIR_FALSE=''
> > USE_SZLIB_DIR_TRUE=''
> > USE_VALGRIND_TESTS_FALSE=''
> > USE_VALGRIND_TESTS_TRUE=''
> > USE_ZLIB_DIR_FALSE=''
> > USE_ZLIB_DIR_TRUE=''
> > VERSION='4.1.2'
> > WHATIS=''
> > ZLIBDIR=''
> > ac_ct_AR='ar'
> > ac_ct_CC='cc'
> > ac_ct_CXX='g++'
> > ac_ct_DUMPBIN=''
> > ac_ct_F77='gfortran'
> > ac_ct_FC='gfortran'
> > am__EXEEXT_FALSE=''
> > am__EXEEXT_TRUE=''
> > am__fastdepCC_FALSE='#'
> > am__fastdepCC_TRUE=''
> > am__fastdepCXX_FALSE='#'
> > am__fastdepCXX_TRUE=''
> > am__include='include'
> > am__isrc=''
> > am__leading_dot='.'
> > am__quote=''
> > am__tar='${AMTAR} chof - "$$tardir"'
> > am__untar='${AMTAR} xf -'
> > bindir='${exec_prefix}/bin'
> > build='x86_64-apple-darwin10.7.3'
> > build_alias=''
> > build_cpu='x86_64'
> > build_os='darwin10.7.3'
> > build_vendor='apple'
> > datadir='${datarootdir}'
> > datarootdir='${prefix}/share'
> > docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
> > dvidir='${docdir}'
> > exec_prefix='NONE'
> > host='x86_64-apple-darwin10.7.3'
> > host_alias=''
> > host_cpu='x86_64'
> > host_os='darwin10.7.3'
> > host_vendor='apple'
> > htmldir='${docdir}'
> > includedir='${prefix}/include'
> > infodir='${datarootdir}/info'
> > install_sh='${SHELL} /Users/Viti/Downloads/netcdf-4.1.2/install-sh'
> > libdir='${exec_prefix}/lib'
> > libexecdir='${exec_prefix}/libexec'
> > localedir='${datarootdir}/locale'
> > localstatedir='${prefix}/var'
> > mandir='${datarootdir}/man'
> > mkdir_p='$(top_builddir)/./install-sh -c -d'
> > oldincludedir='/usr/include'
> > pdfdir='${docdir}'
> > prefix='/lib'
> > prog=''
> > program_transform_name='s,x,x,'
> > psdir='${docdir}'
> > sbindir='${exec_prefix}/sbin'
> > sharedstatedir='${prefix}/com'
> > subdirs=''
> > sysconfdir='${prefix}/etc'
> > target='x86_64-apple-darwin10.7.3'
> > target_alias=''
> > target_cpu='x86_64'
> > target_os='darwin10.7.3'
> > target_vendor='apple'
> >
> > ## ----------- ##
> > ## confdefs.h. ##
> > ## ----------- ##
> >
> > /* confdefs.h */
> > #define PACKAGE_NAME "netCDF"
> > #define PACKAGE_TARNAME "netcdf"
> > #define PACKAGE_VERSION "4.1.2"
> > #define PACKAGE_STRING "netCDF 4.1.2"
> > #define PACKAGE_BUGREPORT "support-netcdf@xxxxxxxxxxxxxxxx"
> > #define PACKAGE_URL ""
> > #define PACKAGE "netcdf"
> > #define VERSION "4.1.2"
> > #define NCIO_MINBLOCKSIZE 256
> > #define USE_FSYNC 1
> > #define DEFAULT_CHUNK_SIZE 4194304
> > #define MAX_DEFAULT_CACHE_SIZE 67108864
> > #define DEFAULT_CHUNKS_IN_CACHE 10
> > #define CHUNK_CACHE_SIZE 4194304
> > #define CHUNK_CACHE_NELEMS 1009
> > #define CHUNK_CACHE_PREEMPTION 0.75
> > #define USE_DAP 1
> > #define ENABLE_DAP 1
> > #define ENABLE_DAP_REMOTE_TESTS 1
> > #define USE_EXTREME_NUMBERS 1
> > #define TEMP_LARGE "."
> > #define HAVE_CURLOPT_KEYPASSWD 1
> > #define STDC_HEADERS 1
> > #define HAVE_SYS_TYPES_H 1
> > #define HAVE_SYS_STAT_H 1
> > #define HAVE_STDLIB_H 1
> > #define HAVE_STRING_H 1
> > #define HAVE_MEMORY_H 1
> > #define HAVE_STRINGS_H 1
> > #define HAVE_INTTYPES_H 1
> > #define HAVE_STDINT_H 1
> > #define HAVE_UNISTD_H 1
> > #define HAVE_DLFCN_H 1
> > #define LT_OBJDIR ".libs/"
> > #define pgiFortran 1
> > #define NF_INT1_T byte
> > #define NF_INT2_T integer*2
> >
> > configure: exit 1
> > _______________________________________________
> > netcdfgroup mailing list
> > netcdfgroup@xxxxxxxxxxxxxxxx
> > For list information or to unsubscribe, visit:
> http://www.unidata.ucar.edu/mailing_lists/
>
> **********************
> "The contents of this message do not reflect any position of the U.S.
> Government or NOAA."
> **********************
> Roy Mendelssohn
> Supervisory Operations Research Analyst
> NOAA/NMFS
> Environmental Research Division
> Southwest Fisheries Science Center
> 1352 Lighthouse Avenue
> Pacific Grove, CA 93950-2097
>
> e-mail: Roy.Mendelssohn@xxxxxxxx (Note new e-mail address)
> voice: (831)-648-9029
> fax: (831)-648-8440
> www: http://www.pfeg.noaa.gov/
>
> "Old age and treachery will overcome youth and skill."
> "From those who have been given much, much will be expected"
>
>
--
