I am struggling to build netcdf with snow leopard.
I have read this thread and tried things but am still getting problems.
This is the error I am getting:
configure: netCDF 4.1.3
checking build system type... x86_64-apple-darwin10.8.0
checking host system type... x86_64-apple-darwin10.8.0
checking target system type... x86_64-apple-darwin10.8.0
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... ./install-sh -c -d
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
configure: checking user options
checking whether CXX is set to ''... no
checking whether FC is set to ''... no
checking whether F90 is set to ''... no
checking whether a NCIO_MINBLOCKSIZE was specified... 256
checking whether udunits is to be built... no
checking if fsync support is enabled... yes
checking whether extra valgrind tests should be run... no
checking whether we should try to build netCDF-4... yes
checking whether libcf is to be built... no
checking whether reading of HDF4 SD files is to be enabled... no
checking whether to fetch some sample HDF4 files from Unidata ftp site to
test HDF4 reading (requires wget)... no
checking whether parallel I/O for classic and 64-bit offset files using
parallel-netcdf is to be enabled... no
checking whether new netCDF-4 C++ API is to be built... no
checking whether extra example tests should be run... no
checking whether parallel IO tests should be run... no
checking whether a default chunk size in bytes was specified... 4194304
checking whether a maximum per-variable cache size for HDF5 was specified...
67108864
checking whether a number of chunks for the default per-variable cache was
specified... 10
checking whether a default file cache size for HDF5 was specified... 4194304
checking whether a default file cache maximum number of elements for HDF5
was specified... 1009
checking whether a default cache preemption for HDF5 was specified... 0.75
checking whether netCDF-4 logging is enabled... no
checking whether cdmremote client is to be built... no
checking whether DAP client is to be built... yes
checking for style of include used by make... GNU
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking dependency style of gcc... gcc3
checking for curl_easy_setopt in -lcurl... yes
checking whether dap remote testing should be enabled (default on)... yes
checking whether the time-consuming dap tests should be enabled (default
off)... no
checking whether netCDF extra tests should be run (developers only)... no
checking whether FFIO will be used... no
checking whether to skip C++, F77, or F90 APIs if compiler is broken... yes
checking whether examples should be built... yes
checking whether F77 API is desired... yes
checking whether any Fortran API is desired... yes
checking whether F90 API is desired... yes
checking whether fortran type sizes should be checked... yes
checking whether CXX API is desired... yes
checking whether v2 netCDF API should be built... yes
checking whether the ncgen/ncdump/nccopy should be built... yes
checking whether large file (> 2GB) tests should be run... no
checking whether benchmaks should be run (experimental)... no
checking whether extreme numbers should be used in tests... yes
checking where to put large temp files if large file tests are run... .
checking whether a win32 DLL is desired... no
configure: finding C compiler
checking for gcc... (cached) gcc
checking whether we are using the GNU C compiler... (cached) yes
checking whether gcc accepts -g... (cached) yes
checking for gcc option to accept ISO C89... (cached) none needed
checking dependency style of gcc... (cached) gcc3
checking whether gcc and cc understand -c and -o together... yes
checking for an ANSI C-conforming const... yes
checking whether a CURLOPT_KEYPASSWD is defined... yes
configure: finding Fortran compiler (will not be used if Fortran API is not
desired)
checking for gfortran... gfortran
checking whether we are using the GNU Fortran compiler... yes
checking whether gfortran accepts -g... yes
checking for gfortran... gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether gfortran accepts -g... yes
configure: setting up Fortran 90
checking what FC is set to... gfortran
checking for Fortran flag to compile .f90 files... none
checking fortran 90 modules inclusion flag... -I
configure: finding C++ compiler (will not be used if C++ API is not desired)
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... gcc3
configure: setting up libtool
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc...
/Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld
checking if the linker
(/Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /Developer/usr/bin/nm
checking the name lister (/Developer/usr/bin/nm) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert x86_64-apple-darwin10.8.0 file names to
x86_64-apple-darwin10.8.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin10.8.0 file names to toolchain
format... func_convert_file_noop
checking for /Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld option
to reload object files... -r
checking for objdump... no
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /Developer/usr/bin/nm output from gcc object... ok
checking for sysroot... no
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fno-common -DPIC
checking if gcc PIC flag -fno-common -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker
(/Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared
libraries... yes
checking dynamic linker characteristics... darwin10.8.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++...
/Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld
checking if the linker
(/Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) is GNU ld... no
checking whether the g++ linker
(/Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared
libraries... yes
checking for g++ option to produce PIC... -fno-common -DPIC
checking if g++ PIC flag -fno-common -DPIC works... yes
checking if g++ static flag -static works... no
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker
(/Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared
libraries... yes
checking dynamic linker characteristics... darwin10.8.0 dyld
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for gfortran option to produce PIC... -fno-common
checking if gfortran PIC flag -fno-common works... yes
checking if gfortran static flag -static works... no
checking if gfortran supports -c -o file.o... yes
checking if gfortran supports -c -o file.o... (cached) yes
checking whether the gfortran linker
(/Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared
libraries... yes
checking dynamic linker characteristics... darwin10.8.0 dyld
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for gfortran option to produce PIC... -fno-common
checking if gfortran PIC flag -fno-common works... yes
checking if gfortran static flag -static works... no
checking if gfortran supports -c -o file.o... yes
checking if gfortran supports -c -o file.o... (cached) yes
checking whether the gfortran linker
(/Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared
libraries... yes
checking dynamic linker characteristics... darwin10.8.0 dyld
checking how to hardcode library paths into programs... immediate
configure: finding other utilities
configure: trying to set fortran flags for this platform
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
configure: displaying some results
checking CPPFLAGS...
checking CC CFLAGS... gcc -g -O2
checking type gcc... gcc is hashed (/Developer/usr/bin/gcc)
checking CXX... g++
checking CXXFLAGS... -g -O2
checking type g++... g++ is /Developer/usr/bin/g++
checking FC... gfortran
checking FFLAGS... -g -O2
checking type gfortran... gfortran is /usr/local/bin/gfortran
checking F90... gfortran
checking FCFLAGS... -g -O2
checking type gfortran... gfortran is /usr/local/bin/gfortran
checking AR... ar
checking AR_FLAGS... cru
checking type ar... ar is hashed (/Developer/usr/bin/ar)
checking NM... /Developer/usr/bin/nm
checking NMFLAGS...
checking for /Developer/usr/bin/nm... /Developer/usr/bin/nm
checking nm flags...
checking for C-equivalent to Fortran routine "SUB"... sub_
checking for Fortran "byte"... yes
checking for Fortran "integer*2"... yes
checking if Fortran "byte" is C "signed char"... configure: error: Could not
link conftestf.o and conftest.o
My config.log is config.log
<http://netcdf-group.1586084.n2.nabble.com/file/n7575014/config.log>
Any help is much appreciated. I have looked on the information in this
thread and i am not if when people are referring to the FFLAGS am i changing
it in the .tcshrc for my computer.
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