On Nov 21, 2013, at 6:52 AM, Richard Weed <rweed@xxxxxxxxxxxxxxxx> wrote:
> Roy
>
> Sounds like your Ubuntu upgrade made gfortran 4.8 your default
> Fortran compiler. gfortran >= 4.8 is one of the few (probably
> the only) compilers that have implemented parts of the recently
> approved extensions to the Fortran 2003/2008 standard for
> "Further Interoperability with C" defined in TS 291113 which
> added support for the ptrdiff_t C data types along with
> a lot of other things designed primarily to make Fortran
> play nice with the MPI libraries.
>
> To fix your problem either:
>
> 1. use the beta 1 distribution and define the
> following before you compile
>
> export FFLAGS=-DHAVE_TS29113_SUPPORT
> export FCFLAGS=-DHAVE_TS29113_SUPPORT
This failed
>
> or
>
> 2. use the release candidate from Github
>
> and run
>
> autoreconf -i -f
>
> to generate your standard configure files. When
> you run configure it should determine if you have
> gfortran >= 4.8 as your compiler.
This worked. Thanks.
-Roy
**********************
"The contents of this message do not reflect any position of the U.S.
Government or NOAA."
**********************
Roy Mendelssohn
Supervisory Operations Research Analyst
NOAA/NMFS
Environmental Research Division
Southwest Fisheries Science Center
1352 Lighthouse Avenue
Pacific Grove, CA 93950-2097
e-mail: Roy.Mendelssohn@xxxxxxxx (Note new e-mail address)
voice: (831)-648-9029
fax: (831)-648-8440
www: http://www.pfeg.noaa.gov/
"Old age and treachery will overcome youth and skill."
"From those who have been given much, much will be expected"
"the arc of the moral universe is long, but it bends toward justice" -MLK Jr.