Dear Chris et al,
Thanks already for the investigation. It has worked for several years. I
installed the NetCDF library via a Centos 7 docker image using conda forge.
Dockerfile:
FROM centos/devtoolset-7-toolchain-centos7:7
USER root
RUN yum update -y && yum install -y bzip2
RUN curl -L -O
https://repo.continuum.io/miniconda/Miniconda2-latest-Linux-x86_64.sh
RUN bash ./Miniconda2-latest-Linux-x86_64.sh -p /miniconda -b
ENV PATH=/miniconda/bin:${PATH}
RUN conda update -y conda
RUN conda config --add channels conda-forge
RUN conda update -y conda && conda install -y netcdf4
CMD bash
Build with:
docker build -t netcdftest .
Run with:
docker run -it netcdftest bash -c "ncdump -h
http://opendap.knmi.nl/knmi/thredds/dodsC/CLIPC/tudo/tier3/waterb_arcgis-10-4-0_IRPUD_JRC-LUISA-Landuse_10yr_20100101-20501231.nc";
ncdump:
http://opendap.knmi.nl/knmi/thredds/dodsC/CLIPC/tudo/tier3/waterb_arcgis-10-4-0_IRPUD_JRC-LUISA-Landuse_10yr_20100101-20501231.nc:
http://opendap.knmi.nl/knmi/thredds/dodsC/CLIPC/tudo/tier3/waterb_arcgis-10-4-0_IRPUD_JRC-LUISA-Landuse_10yr_20100101-20501231.nc:
NetCDF: Not a valid data type or _FillValue type mismatch
I think I can make a workarround for conda, I will try to use the package
manager instead.
Cheers,
Maarten
________________________________________
Van: Chris Barker <chris.barker@xxxxxxxx>
Verzonden: vrijdag 15 maart 2019 00:48:45
Aan: Plieger, Maarten (KNMI)
CC: netcdfgroup@xxxxxxxxxxxxxxxx
Onderwerp: Re: [netcdfgroup] Unable to use new ncdump (4.6.2) on opendap URL
that URL works for me with 4.6.1.
How did you built it? or get it from?
-CHB
On Thu, Mar 14, 2019 at 7:41 AM Plieger, Maarten (KNMI)
<maarten.plieger@xxxxxxx<mailto:maarten.plieger@xxxxxxx>> wrote:
Dear NetCDFGroup,
I have a question: A previous version of ncdump (4.4.1.1) does give a nice
overview of an OpenDAP URL, while a newer version of ncdump (4.6.2) does not:
Version netcdf library version 4.4.1.1 of Apr 10 2018 03:02:27:
$ ncdump -h
http://opendap.knmi.nl/knmi/thredds/dodsC/CLIPC/tudo/tier3/waterb_arcgis-10-4-0_IRPUD_JRC-LUISA-Landuse_10yr_20100101-20501231.nc
Gives
netcdf waterb_arcgis-10-4-0_IRPUD_JRC-LUISA-Landuse_10yr_20100101-20501231 {
dimensions:
time = UNLIMITED ; // (5 currently)
x = 390 ;
y = 393 ;
variables:
...
}
works, fine while:
netcdf library version 4.6.2 of Dec 17 2018 19:36:03
$ ncdump -h
http://opendap.knmi.nl/knmi/thredds/dodsC/CLIPC/tudo/tier3/waterb_arcgis-10-4-0_IRPUD_JRC-LUISA-Landuse_10yr_20100101-20501231.nc
Gives
ncdump:
http://opendap.knmi.nl/knmi/thredds/dodsC/CLIPC/tudo/tier3/waterb_arcgis-10-4-0_IRPUD_JRC-LUISA-Landuse_10yr_20100101-20501231.nc:
http://opendap.knmi.nl/knmi/thredds/dodsC/CLIPC/tudo/tier3/waterb_arcgis-10-4-0_IRPUD_JRC-LUISA-Landuse_10yr_20100101-20501231.nc:
NetCDF: Not a valid data type or _FillValue type mismatch
Am I forgetting something?
Cheers,
Maarten Plieger
KNMI
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