Hi Micho,
I'm willing to take a look at your issue, but I really need to be able to
reproduce it first in order to make any progress. So, in addition to the
catalog, can you make the relevant datasets available as well? If you have
a lot of data in your TDS, you may need to go through a
process-of-elimination to determine the subset of files that are causing
the problem.
Cheers,
Christian Ward-Garrison
On Thu, Sep 11, 2014 at 10:58 AM, Micho García <micho.garcia@xxxxxxxxxx>
wrote:
> Hi all,
>
> I am Micho García, I am a GIS Developer from Spain. I have worked with TDS
> in multiple projects, but I am not specialist in it, only an integrator.
>
> Now I am working in a project managing model climate data. I have created
> a catalog with two FMRC Collections, one works but the other one don't
> works. I send you the catalog.xml and the traceback from the TDS.
>
> Any help will be welcome!.
>
> Thanks in advance.
>
> The catalog:
>
> <?xml version="1.0" encoding="UTF-8"?>
> <catalog xmlns="
> http://www.unidata.ucar.edu/namespaces/thredds/InvCatalog/v1.0";
> xmlns:xlink="http://www.w3.org/1999/xlink"; name="Unidata THREDDS-IDD
> NetCDF-OpenDAP Server" version="1.0.1">
> <service name="all" serviceType="Compound" base="">
> <service name="odap" serviceType="OPENDAP" base="/thredds/dodsC/"/>
> <service name="http" serviceType="HTTPServer"
> base="/thredds/fileServer/"/>
> <service name="wms" serviceType="WMS" base="/thredds/wms/"/>
> <!--service name="wcs" serviceType="WCS" base="/thredds/wcs/"/>
> <service name="ncss" serviceType="NetcdfSubset"
> base="/thredds/ncss/grid/"/>
> <service name="ncml" serviceType="NCML" base="/thredds/ncml/"/>
> <service name="uddc" serviceType="UDDC" base="/thredds/uddc/"/>
> <service name="iso" serviceType="ISO" base="/thredds/iso/"/-->
> </service>
> <dataset name="Mixed Models">
> <metadata inherited="true">
> <serviceName>all</serviceName>
> <dataType>Grid</dataType>
> <dataFormat>NetCDF</dataFormat>
> </metadata>
> <!-- MODELO Combinado CMIP5 -->
> <dataset name="CMIP5">
> <featureCollection name="CMIP5_rcp26" featureType="FMRC"
> path="CMIP5/2020_2039/rcp26">
> <metadata inherited="true">
> <serviceName>all</serviceName>
> </metadata>
> <collection
> spec="/home/datos/netcdf/modelos/combinado/CMIP5/rcp26/.*nc$"/>
> </featureCollection>
> <featureCollection name="CMIP5_rcp45" featureType="FMRC"
> path="CMIP5/2020_2039/rcp45">
> <metadata inherited="true">
> <serviceName>all</serviceName>
> </metadata>
> <collection
> spec="/home/datos/netcdf/modelos/combinado/CMIP5/rcp45/.*nc$"/>
> </featureCollection>
> <featureCollection name="CMIP5_rcp85" featureType="FMRC"
> path="CMIP5/2020_2039/rcp85">
> <metadata inherited="true">
> <serviceName>all</serviceName>
> </metadata>
> <collection
> spec="/home/datos/netcdf/modelos/combinado/CMIP5/rcp85/.*nc$"/>
> </featureCollection>
> </dataset>
> <!-- MODELO Combinado REMO -->
> <dataset name="REMO">
> <!--featureCollection name="REMO" featureType="FMRC"
> path="REMO/2020_2039">
> <metadata inherited="true">
> <serviceName>all</serviceName>
> </metadata>
> <collection
> spec="/home/datos/netcdf/modelos/combinado/REMO/.*nc$"/>
> </featureCollection-->
> </dataset>
> </dataset>
> </catalog>
>
> The traceback:
>
> [2014-09-11T12:42:49.946-0400] ERROR ucar.nc2.ft.fmrc.Fmrc: makeFmrcInv
> java.lang.NullPointerException
> at ucar.nc2.ft.fmrc.GridDatasetInv.<init>(GridDatasetInv.java:182)
> at ucar.nc2.ft.fmrc.GridDatasetInv.open(GridDatasetInv.java:130)
> at ucar.nc2.ft.fmrc.Fmrc.makeFmrcInv(Fmrc.java:300)
> at ucar.nc2.ft.fmrc.Fmrc.update(Fmrc.java:239)
> at ucar.nc2.ft.fmrc.Fmrc.checkNeeded(Fmrc.java:268)
> at ucar.nc2.ft.fmrc.Fmrc.getDataset2D(Fmrc.java:184)
> at thredds.catalog.InvDatasetFcFmrc.checkState(InvDatasetFcFmrc.java:103)
> at thredds.catalog.InvDatasetFcFmrc.makeCatalog(InvDatasetFcFmrc.java:131)
> at
> thredds.servlet.DataRootHandler.makeDynamicCatalog(DataRootHandler.java:1459)
> at thredds.servlet.DataRootHandler.getCatalog(DataRootHandler.java:1422)
> at
> thredds.server.catalogservice.LocalCatalogServiceController.handleRequestInternal(LocalCatalogServiceController.java:191)
> at
> org.springframework.web.servlet.mvc.AbstractController.handleRequest(AbstractController.java:153)
> at
> org.springframework.web.servlet.mvc.SimpleControllerHandlerAdapter.handle(SimpleControllerHandlerAdapter.java:48)
> at
> org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:925)
> at
> org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:856)
> at
> org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:936)
> at
> org.springframework.web.servlet.FrameworkServlet.doGet(FrameworkServlet.java:827)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:620)
> at
> org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:812)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:727)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
> at
> thredds.servlet.filter.CatalogServiceFilter.doFilter(CatalogServiceFilter.java:107)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
> at
> thredds.servlet.filter.RequestQueryFilter.doFilter(RequestQueryFilter.java:117)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
> at
> thredds.servlet.filter.RequestPathFilter.doFilter(RequestPathFilter.java:102)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
> at
> thredds.server.RequestBracketingLogMessageFilter.doFilter(RequestBracketingLogMessageFilter.java:48)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
> at
> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:220)
> at
> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:122)
> at
> org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:501)
> at
> org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:170)
> at
> org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:98)
> at
> org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:950)
> at
> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
> at
> org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:408)
> at
> org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1040)
> at
> org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:607)
> at
> org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:315)
> at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
> at java.lang.Thread.run(Thread.java:745)
> [2014-09-11T12:42:49.946-0400] ERROR ucar.nc2.ft.fmrc.Fmrc:
> /home/datos/netcdf/modelos/combinado/REMO/.*nc$: makeFmrcInv failed
> java.lang.RuntimeException: java.lang.NullPointerException
> at ucar.nc2.ft.fmrc.Fmrc.makeFmrcInv(Fmrc.java:332)
> at ucar.nc2.ft.fmrc.Fmrc.update(Fmrc.java:239)
> at ucar.nc2.ft.fmrc.Fmrc.checkNeeded(Fmrc.java:268)
> at ucar.nc2.ft.fmrc.Fmrc.getDataset2D(Fmrc.java:184)
> at thredds.catalog.InvDatasetFcFmrc.checkState(InvDatasetFcFmrc.java:103)
> at thredds.catalog.InvDatasetFcFmrc.makeCatalog(InvDatasetFcFmrc.java:131)
> at
> thredds.servlet.DataRootHandler.makeDynamicCatalog(DataRootHandler.java:1459)
> at thredds.servlet.DataRootHandler.getCatalog(DataRootHandler.java:1422)
> at
> thredds.server.catalogservice.LocalCatalogServiceController.handleRequestInternal(LocalCatalogServiceController.java:191)
> at
> org.springframework.web.servlet.mvc.AbstractController.handleRequest(AbstractController.java:153)
> at
> org.springframework.web.servlet.mvc.SimpleControllerHandlerAdapter.handle(SimpleControllerHandlerAdapter.java:48)
> at
> org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:925)
> at
> org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:856)
> at
> org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:936)
> at
> org.springframework.web.servlet.FrameworkServlet.doGet(FrameworkServlet.java:827)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:620)
> at
> org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:812)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:727)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
> at
> thredds.servlet.filter.CatalogServiceFilter.doFilter(CatalogServiceFilter.java:107)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
> at
> thredds.servlet.filter.RequestQueryFilter.doFilter(RequestQueryFilter.java:117)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
> at
> thredds.servlet.filter.RequestPathFilter.doFilter(RequestPathFilter.java:102)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
> at
> thredds.server.RequestBracketingLogMessageFilter.doFilter(RequestBracketingLogMessageFilter.java:48)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
> at
> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:220)
> at
> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:122)
> at
> org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:501)
> at
> org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:170)
> at
> org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:98)
> at
> org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:950)
> at
> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
> at
> org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:408)
> at
> org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1040)
> at
> org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:607)
> at
> org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:315)
> at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
> at java.lang.Thread.run(Thread.java:745)
> Caused by: java.lang.NullPointerException
> at ucar.nc2.ft.fmrc.GridDatasetInv.<init>(GridDatasetInv.java:182)
> at ucar.nc2.ft.fmrc.GridDatasetInv.open(GridDatasetInv.java:130)
> at ucar.nc2.ft.fmrc.Fmrc.makeFmrcInv(Fmrc.java:300)
> ... 45 more
>
> --
> Micho Garcia
> http://geomati.co
>
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