Hi,
Thank you, forgot about those logs. Two data directories from a different
system are gone. Will have to ask the researcher if I can comment them out or
get the data restored.
scanLocation=/net/nfs/wilma/data3/odac/model/mm5/analysis>: CrawlableDataset
for scanLocation does not exist.
... Dropping this datasetScan [mm5/analysis].
added rootPath=<wrf/analysis> for directory=
</net/nfs/wilma/data3/odac/model/wrf/analysis>
*** ERROR Invalid InvDatasetScan <path=wrf/48hr_forecast;
scanLocation=/net/nfs/wilma/data3/odac/model/wrf/48hr_forecast>
Mark
--Mark Maciolek
Network Administrator
Morse Hall Rm 338
http://www.unh.edu/research/support-units/research-computing-center
From: Antonio S. Cofino <cofinoa@xxxxxxxxx>
Sent: Tuesday, July 24, 2018 11:42 AM
To: Maciolek, Mark <Mark.Maciolek@xxxxxxx>
Cc: THREDDS community <thredds@xxxxxxxxxxxxxxxx>
Subject: Re: [thredds] directories only
Caution - External Email
________________________________
Mark,
Check for any error in catalogInit.log at $TDS_CONTENT/thredds/logs
A.
On Tue, 24 Jul 2018, 16:22 Maciolek, Mark,
<Mark.Maciolek@xxxxxxx<mailto:Mark.Maciolek@xxxxxxx>> wrote:
Hi,
opal_catalog.xml not changed since Oct. 2016
http://tds-opal.sr.unh.edu/thredds/catalog/opal_ts/altimeter/wav_files/jason1/c257/catalog.html
no longer showing any of the files in the catalog.html
I can do a ls of the directory and see all the files are there.
System was updated to CentOS 7.5 last week and rebooted. Updated to TDS-4.6.11
today.
Tomcat logs don't show reason why this is happening.
Files are mounted vis nfs but that has been the case since the system was
originally setup.
Any suggestions on troubleshooting this issue?
Current opal_catalog.xml
<?xml version="1.0" encoding="UTF-8"?>
<catalog name="OPAL CO2 Bouy"
xmlns="http://www.unidata.ucar.edu/namespaces/thredds/InvCatalog/v1.0<https://urldefense.proofpoint.com/v2/url?u=http-3A__www.unidata.ucar.edu_namespaces_thredds_InvCatalog_v1.0&d=DwMGaQ&c=c6MrceVCY5m5A_KAUkrdoA&r=QUwWzv5SV_wpnzBhWIelF4sl0dvYrJSwkpE3s0K2d-w&m=RzrEBG7JTCTlYK0yYV0Sx2YSXdj96PADq2KETneE6F8&s=CwSENV9l-ZOHmQm-oazm5JtWuqWQrdd93xPiZVttluI&e=>"
xmlns:xlink="http://www.w3.org/1999/xlink<https://urldefense.proofpoint.com/v2/url?u=http-3A__www.w3.org_1999_xlink&d=DwMGaQ&c=c6MrceVCY5m5A_KAUkrdoA&r=QUwWzv5SV_wpnzBhWIelF4sl0dvYrJSwkpE3s0K2d-w&m=RzrEBG7JTCTlYK0yYV0Sx2YSXdj96PADq2KETneE6F8&s=3dInTVnm7yF0OhQUtHG2M0xB5u0ZbmTZ3vwhDj8cIFM&e=>"
version="1.0.2">
<service name="allServices" base="" serviceType="compound">
<service name="dapService" serviceType="OpenDAP"
base="/thredds/dodsC/"/>
<service name="wcs" serviceType="WCS" base="/thredds/wcs/"/>
<service name="ncss" serviceType="NetcdfSubset"
base="/thredds/ncss/grid/"/>
<service name="http" serviceType="HTTPServer"
base="/thredds/fileServer/" />
<service name="uddc" serviceType="UDDC" base="/thredds/uddc/"/>
<service name="iso" serviceType="ISO" base="/thredds/iso/"/>
<service name="sos" serviceType="SOS" base="/thredds/sos/"/>
</service>
<dataset name="OPAL Time Series Data">
<metadata inherited="true">
<serviceName>allServices</serviceName>
<dataType>Grid</dataType>
<dataFormat>NetCDF</dataFormat>
</metadata>
<!-- <dataset name="opal_ts/WBD" ID="opal_ts/WBD" urlPath="opal_ts/WBD">
<netcdf
xmlns="http://www.unidata.ucar.edu/namespaces/netcdf/ncml-2.2<https://urldefense.proofpoint.com/v2/url?u=http-3A__www.unidata.ucar.edu_namespaces_netcdf_ncml-2D2.2&d=DwMGaQ&c=c6MrceVCY5m5A_KAUkrdoA&r=QUwWzv5SV_wpnzBhWIelF4sl0dvYrJSwkpE3s0K2d-w&m=RzrEBG7JTCTlYK0yYV0Sx2YSXdj96PADq2KETneE6F8&s=beirJShdNz9LBwrPmHmc5zMtxrVKJ9Msux3R5_nTXgg&e=>">
scan location="/net/nfs/porter/raid1/data/COOA/opal_ts/WBD"
dateFormatMark="WBD_#yyyy"
regExp=".*WBD\_[0-9]{4}\.nc$" suffix=".nc" subdirs="false" />
</netcdf>
</dataset>
-->
<datasetScan name="opal_ts/WBD" ID="opal_ts/WBD" path="opal_ts/WBD"
location="/net/nfs/porter/raid1/data/COOA/opal_ts/WBD">
<metadata inherited="true">
<documentation type="summary"> UNH Appledore Island CO2
Buoy</documentation>
</metadata>
<filter>
<include wildcard="*.nc"/>
</filter>
<addDatasetSize/>
</datasetScan>
<datasetScan name="opal_ts/CML" ID="opal_ts/CML" path="opal_ts/CML"
location="/net/nfs/porter/raid1/data/COOA/opal_ts/CML">
<metadata inherited="true">
<documentation type="summary"> UNH Coastal Marine
Laboratory</documentation>
</metadata>
<filter>
<include wildcard="*.nc"/>
</filter>
<addDatasetSize/>
</datasetScan>
<datasetScan name="opal_ts/opal_asflux" ID="opal_ts/opal_asflux"
path="opal_ts/opal_asflux"
location="/net/nfs/porter/raid1/data/COOA/opal_ts/opal_asflux">
<metadata inherited="true">
<documentation type="summary"> Jeffrey's Ledge Air-Sea Flux
Buoy</documentation>
</metadata>
<filter>
<include wildcard="*.nc"/>
</filter>
<addDatasetSize/>
</datasetScan>
<datasetScan name="opal_ts/altimeter/wav_files/jason1"
ID="opal_ts/altimeter/wav_files/jason1"
path="opal_ts/altimeter/wav_files/jason1"
location="/net/nfs/porter/raid1/data/COOA/opal_ts/altimeter/wav_files/jason1">
<metadata inherited="true">
<documentation type="summary"> Altimeter Matched with
WaveWatch 3</documentation>
</metadata>
<filter>
<include wildcard="*.nc"/>
</filter>
<addDatasetSize/>
</datasetScan>
<datasetScan name="opal_ts/altimeter/wav_files/jason2"
ID="opal_ts/altimeter/wav_files/jason2"
path="opal_ts/altimeter/wav_files/jason2"
location="/net/nfs/porter/raid1/data/COOA/opal_ts/altimeter/wav_files/jason2">
<metadata inherited="true">
<documentation type="summary"> Altimeter Matched with
WaveWatch 3</documentation>
</metadata>
<filter>
<include wildcard="*.nc"/>
</filter>
<addDatasetSize/>
</datasetScan>
<datasetScan name="opal_ts/altimeter/wav_files/topex"
ID="opal_ts/altimeter/wav_files/topex" path="opal_ts/altimeter/wav_files/topex"
location="/net/nfs/porter/raid1/data/COOA/opal_ts/altimeter/wav_files/topex">
<metadata inherited="true">
<documentation type="summary"> Altimeter Matched with
WaveWatch 3-TOPEX</documentation>
</metadata>
<filter>
<include wildcard="*.nc"/>
</filter>
<addDatasetSize/>
</datasetScan>
<datasetScan name="opal_ts/altimeter/wav_files/jason3"
ID="opal_ts/altimeter/wav_files/jason3"
path="opal_ts/altimeter/wav_files/jason3"
location="/net/nfs/porter/raid1/data/COOA/opal_ts/altimeter/wav_files/jason3">
<metadata inherited="true">
<documentation type="summary"> Altimeter Matched with
WaveWatch 3-JASON3</documentation>
</metadata>
<filter>
<include wildcard="*.nc"/>
</filter>
<addDatasetSize/>
</datasetScan>
</dataset>
</catalog>
--Mark Maciolek
Network Administrator
Morse Hall Rm 338
http://www.unh.edu/research/support-units/research-computing-center
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