Fabrício Zimmerer wrote:
> it looks like you are using x-code stuff... I think they are quite broken to
> compile NetCDF.
The netCDF C distributions, such as the recent 4.3.0 release, work with
XCode compilers in our tests. However, getting a Fortran compiler that
works with the XCode C compiler can be tricky.
> You might try to upgrade your compiler and autoconf/automake using the
> MacPorts, that is an independent implementation (not official to osx)
> similar to 'apt-get', 'emerge', 'yum', 'yast', to install latest version of
> software to your MAC.
>
> It is available at www.macports.org.
> A friend was only able to compile NetCDF (4.2.x) once he used MacPorts to
> upgrade his compiling environment. The sequence is to install X-Code to get
> initial compiling environment, and then upgrade the compiler, make, some
> libraries already present from MacPorts as needed, and then compile NetCDF.
I second Fabrício Zimmerer's recommendation to use macports. The netCDF
C version 4.2.1.1 and netCDF Fortran version 4.2 software can be
installed by using macports to build and install the "netcdf-fortran"
package, which also installs gcc-4.7 and gfortran-4.7, if necessary.
These don't overwrite the XCode C compiler, so won't interfere with the
OSX development environment.
Thanks to Takeshi Horinouchi for maintaining the macports netCDF
package.
--Russ
> -----Original Message-----
> From: The_curious_Pear
> Sent: Wednesday, June 12, 2013 7:58 AM
> To: netcdfgroup@xxxxxxxxxxxxxxxx
> Subject: Re: [netcdfgroup] 64-bit build with Snow Leopard?
>
> I am struggling to build netcdf with snow leopard.
>
> I have read this thread and tried things but am still getting problems.
>
> This is the error I am getting:
> configure: netCDF 4.1.3
> checking build system type... x86_64-apple-darwin10.8.0
> checking host system type... x86_64-apple-darwin10.8.0
> checking target system type... x86_64-apple-darwin10.8.0
> checking for a BSD-compatible install... /usr/bin/install -c
> checking whether build environment is sane... yes
> checking for a thread-safe mkdir -p... ./install-sh -c -d
> checking for gawk... no
> checking for mawk... no
> checking for nawk... no
> checking for awk... awk
> checking whether make sets $(MAKE)... yes
> configure: checking user options
> checking whether CXX is set to ''... no
> checking whether FC is set to ''... no
> checking whether F90 is set to ''... no
> checking whether a NCIO_MINBLOCKSIZE was specified... 256
> checking whether udunits is to be built... no
> checking if fsync support is enabled... yes
> checking whether extra valgrind tests should be run... no
> checking whether we should try to build netCDF-4... yes
> checking whether libcf is to be built... no
> checking whether reading of HDF4 SD files is to be enabled... no
> checking whether to fetch some sample HDF4 files from Unidata ftp site to
> test HDF4 reading (requires wget)... no
> checking whether parallel I/O for classic and 64-bit offset files using
> parallel-netcdf is to be enabled... no
> checking whether new netCDF-4 C++ API is to be built... no
> checking whether extra example tests should be run... no
> checking whether parallel IO tests should be run... no
> checking whether a default chunk size in bytes was specified... 4194304
> checking whether a maximum per-variable cache size for HDF5 was specified...
> 67108864
> checking whether a number of chunks for the default per-variable cache was
> specified... 10
> checking whether a default file cache size for HDF5 was specified... 4194304
> checking whether a default file cache maximum number of elements for HDF5
> was specified... 1009
> checking whether a default cache preemption for HDF5 was specified... 0.75
> checking whether netCDF-4 logging is enabled... no
> checking whether cdmremote client is to be built... no
> checking whether DAP client is to be built... yes
> checking for style of include used by make... GNU
> checking for gcc... gcc
> checking whether the C compiler works... yes
> checking for C compiler default output file name... a.out
> checking for suffix of executables...
> checking whether we are cross compiling... no
> checking for suffix of object files... o
> checking whether we are using the GNU C compiler... yes
> checking whether gcc accepts -g... yes
> checking for gcc option to accept ISO C89... none needed
> checking dependency style of gcc... gcc3
> checking for curl_easy_setopt in -lcurl... yes
> checking whether dap remote testing should be enabled (default on)... yes
> checking whether the time-consuming dap tests should be enabled (default
> off)... no
> checking whether netCDF extra tests should be run (developers only)... no
> checking whether FFIO will be used... no
> checking whether to skip C++, F77, or F90 APIs if compiler is broken... yes
> checking whether examples should be built... yes
> checking whether F77 API is desired... yes
> checking whether any Fortran API is desired... yes
> checking whether F90 API is desired... yes
> checking whether fortran type sizes should be checked... yes
> checking whether CXX API is desired... yes
> checking whether v2 netCDF API should be built... yes
> checking whether the ncgen/ncdump/nccopy should be built... yes
> checking whether large file (> 2GB) tests should be run... no
> checking whether benchmaks should be run (experimental)... no
> checking whether extreme numbers should be used in tests... yes
> checking where to put large temp files if large file tests are run... .
> checking whether a win32 DLL is desired... no
> configure: finding C compiler
> checking for gcc... (cached) gcc
> checking whether we are using the GNU C compiler... (cached) yes
> checking whether gcc accepts -g... (cached) yes
> checking for gcc option to accept ISO C89... (cached) none needed
> checking dependency style of gcc... (cached) gcc3
> checking whether gcc and cc understand -c and -o together... yes
> checking for an ANSI C-conforming const... yes
> checking whether a CURLOPT_KEYPASSWD is defined... yes
> configure: finding Fortran compiler (will not be used if Fortran API is not
> desired)
> checking for gfortran... gfortran
> checking whether we are using the GNU Fortran compiler... yes
> checking whether gfortran accepts -g... yes
> checking for gfortran... gfortran
> checking whether we are using the GNU Fortran 77 compiler... yes
> checking whether gfortran accepts -g... yes
> configure: setting up Fortran 90
> checking what FC is set to... gfortran
> checking for Fortran flag to compile .f90 files... none
> checking fortran 90 modules inclusion flag... -I
> configure: finding C++ compiler (will not be used if C++ API is not desired)
> checking for g++... g++
> checking whether we are using the GNU C++ compiler... yes
> checking whether g++ accepts -g... yes
> checking dependency style of g++... gcc3
> configure: setting up libtool
> checking how to print strings... printf
> checking for a sed that does not truncate output... /usr/bin/sed
> checking for grep that handles long lines and -e... /usr/bin/grep
> checking for egrep... /usr/bin/grep -E
> checking for fgrep... /usr/bin/grep -F
> checking for ld used by gcc...
> /Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld
> checking if the linker
> (/Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) is GNU ld... no
> checking for BSD- or MS-compatible name lister (nm)... /Developer/usr/bin/nm
> checking the name lister (/Developer/usr/bin/nm) interface... BSD nm
> checking whether ln -s works... yes
> checking the maximum length of command line arguments... 196608
> checking whether the shell understands some XSI constructs... yes
> checking whether the shell understands "+="... yes
> checking how to convert x86_64-apple-darwin10.8.0 file names to
> x86_64-apple-darwin10.8.0 format... func_convert_file_noop
> checking how to convert x86_64-apple-darwin10.8.0 file names to toolchain
> format... func_convert_file_noop
> checking for /Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld option
> to reload object files... -r
> checking for objdump... no
> checking how to recognize dependent libraries... pass_all
> checking for dlltool... no
> checking how to associate runtime and link libraries... printf %s\n
> checking for ar... ar
> checking for archiver @FILE support... no
> checking for strip... strip
> checking for ranlib... ranlib
> checking command to parse /Developer/usr/bin/nm output from gcc object... ok
> checking for sysroot... no
> checking for mt... no
> checking if : is a manifest tool... no
> checking for dsymutil... dsymutil
> checking for nmedit... nmedit
> checking for lipo... lipo
> checking for otool... otool
> checking for otool64... no
> checking for -single_module linker flag... yes
> checking for -exported_symbols_list linker flag... yes
> checking for -force_load linker flag... yes
> checking how to run the C preprocessor... gcc -E
> checking for ANSI C header files... yes
> checking for sys/types.h... yes
> checking for sys/stat.h... yes
> checking for stdlib.h... yes
> checking for string.h... yes
> checking for memory.h... yes
> checking for strings.h... yes
> checking for inttypes.h... yes
> checking for stdint.h... yes
> checking for unistd.h... yes
> checking for dlfcn.h... yes
> checking for objdir... .libs
> checking if gcc supports -fno-rtti -fno-exceptions... no
> checking for gcc option to produce PIC... -fno-common -DPIC
> checking if gcc PIC flag -fno-common -DPIC works... yes
> checking if gcc static flag -static works... no
> checking if gcc supports -c -o file.o... yes
> checking if gcc supports -c -o file.o... (cached) yes
> checking whether the gcc linker
> (/Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared
> libraries... yes
> checking dynamic linker characteristics... darwin10.8.0 dyld
> checking how to hardcode library paths into programs... immediate
> checking whether stripping libraries is possible... yes
> checking if libtool supports shared libraries... yes
> checking whether to build shared libraries... yes
> checking whether to build static libraries... yes
> checking how to run the C++ preprocessor... g++ -E
> checking for ld used by g++...
> /Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld
> checking if the linker
> (/Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) is GNU ld... no
> checking whether the g++ linker
> (/Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared
> libraries... yes
> checking for g++ option to produce PIC... -fno-common -DPIC
> checking if g++ PIC flag -fno-common -DPIC works... yes
> checking if g++ static flag -static works... no
> checking if g++ supports -c -o file.o... yes
> checking if g++ supports -c -o file.o... (cached) yes
> checking whether the g++ linker
> (/Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared
> libraries... yes
> checking dynamic linker characteristics... darwin10.8.0 dyld
> checking how to hardcode library paths into programs... immediate
> checking if libtool supports shared libraries... yes
> checking whether to build shared libraries... yes
> checking whether to build static libraries... yes
> checking for gfortran option to produce PIC... -fno-common
> checking if gfortran PIC flag -fno-common works... yes
> checking if gfortran static flag -static works... no
> checking if gfortran supports -c -o file.o... yes
> checking if gfortran supports -c -o file.o... (cached) yes
> checking whether the gfortran linker
> (/Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared
> libraries... yes
> checking dynamic linker characteristics... darwin10.8.0 dyld
> checking how to hardcode library paths into programs... immediate
> checking if libtool supports shared libraries... yes
> checking whether to build shared libraries... yes
> checking whether to build static libraries... yes
> checking for gfortran option to produce PIC... -fno-common
> checking if gfortran PIC flag -fno-common works... yes
> checking if gfortran static flag -static works... no
> checking if gfortran supports -c -o file.o... yes
> checking if gfortran supports -c -o file.o... (cached) yes
> checking whether the gfortran linker
> (/Developer/usr/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared
> libraries... yes
> checking dynamic linker characteristics... darwin10.8.0 dyld
> checking how to hardcode library paths into programs... immediate
> configure: finding other utilities
> configure: trying to set fortran flags for this platform
> checking for special C compiler options needed for large files... no
> checking for _FILE_OFFSET_BITS value needed for large files... no
> configure: displaying some results
> checking CPPFLAGS...
> checking CC CFLAGS... gcc -g -O2
> checking type gcc... gcc is hashed (/Developer/usr/bin/gcc)
> checking CXX... g++
> checking CXXFLAGS... -g -O2
> checking type g++... g++ is /Developer/usr/bin/g++
> checking FC... gfortran
> checking FFLAGS... -g -O2
> checking type gfortran... gfortran is /usr/local/bin/gfortran
> checking F90... gfortran
> checking FCFLAGS... -g -O2
> checking type gfortran... gfortran is /usr/local/bin/gfortran
> checking AR... ar
> checking AR_FLAGS... cru
> checking type ar... ar is hashed (/Developer/usr/bin/ar)
> checking NM... /Developer/usr/bin/nm
> checking NMFLAGS...
> checking for /Developer/usr/bin/nm... /Developer/usr/bin/nm
> checking nm flags...
> checking for C-equivalent to Fortran routine "SUB"... sub_
> checking for Fortran "byte"... yes
> checking for Fortran "integer*2"... yes
> checking if Fortran "byte" is C "signed char"... configure: error: Could not
> link conftestf.o and conftest.o
>
> My config.log is config.log
> <http://netcdf-group.1586084.n2.nabble.com/file/n7575015/config.log>
>
> Any help is much appreciated. I have looked on the information in this
> thread and i am not if when people are referring to the FFLAGS am i changing
> it in the .tcshrc for my computer.
>
>
>
>
> --
> View this message in context:
> http://netcdf-group.1586084.n2.nabble.com/64-bit-build-with-Snow-Leopard-tp41
> 34434p7575015.html
> Sent from the NetCDF Group mailing list archive at Nabble.com.
>
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